RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 NXPH3O95157 252 aa15.14■□□□□ 0.01
COL18A1-203ENST00000359759 ITGB2P05107 769 aa15.14■□□□□ 0.01
COL18A1-203ENST00000359759 RPS18P62269 152 aaKnown RBP15.14■□□□□ 0.01
COL18A1-203ENST00000359759 RAB6CQ53S08 254 aa15.14■□□□□ 0.01
COL18A1-203ENST00000359759 PNPLA1Q8N8W4 532 aa15.14■□□□□ 0.01
COL18A1-203ENST00000359759 RAB6CQ9H0N0 254 aa15.14■□□□□ 0.01
COL18A1-203ENST00000359759 CPNE5Q9HCH3 593 aa15.14■□□□□ 0.01
COL18A1-203ENST00000359759 APOBEC3BQ9UH17 382 aaKnown RBP15.14■□□□□ 0.01
COL18A1-203ENST00000359759 MEIOCA2RUB1 952 aa15.13■□□□□ 0.01
COL18A1-203ENST00000359759 CASP6P55212 293 aa15.13■□□□□ 0.01
COL18A1-203ENST00000359759 SLC9A3R2Q15599 337 aa15.13■□□□□ 0.01
COL18A1-203ENST00000359759 PLCXD3Q63HM9 321 aa15.13■□□□□ 0.01
COL18A1-203ENST00000359759 BTBD2Q9BX70 525 aa15.13■□□□□ 0.01
COL18A1-203ENST00000359759 QRSL1Q9H0R6 528 aaKnown RBP15.13■□□□□ 0.01
COL18A1-203ENST00000359759 BHLHE40O14503 412 aa15.13■□□□□ 0.01
COL18A1-203ENST00000359759 LCMT2O60294 686 aaKnown RBP15.13■□□□□ 0.01
COL18A1-203ENST00000359759 PRAMEF2O60811 474 aa15.13■□□□□ 0.01
COL18A1-203ENST00000359759 SYPP08247 313 aa15.13■□□□□ 0.01
COL18A1-203ENST00000359759 STK11Q15831 433 aa15.13■□□□□ 0.01
COL18A1-203ENST00000359759 C12orf76Q8N812 135 aaPredicted RBP15.13■□□□□ 0.01
COL18A1-203ENST00000359759 OR1J4Q8NGS1 313 aa15.13■□□□□ 0.01
COL18A1-203ENST00000359759 DDX31Q9H8H2 851 aaKnown RBP15.13■□□□□ 0.01
COL18A1-203ENST00000359759 TRAV27A0A087WT01 109 aa15.13■□□□□ 0.01
COL18A1-203ENST00000359759 SOCS6O14544 535 aa15.13■□□□□ 0.01
COL18A1-203ENST00000359759 GSRP00390 522 aa15.13■□□□□ 0.01
COL18A1-203ENST00000359759 UPP1Q16831 310 aa15.13■□□□□ 0.01
COL18A1-203ENST00000359759 FIGLAQ6QHK4 219 aa15.13■□□□□ 0.01
COL18A1-203ENST00000359759 TP53INP2Q8IXH6 220 aa15.13■□□□□ 0.01
COL18A1-203ENST00000359759 GIMAP1Q8WWP7 306 aa15.13■□□□□ 0.01
COL18A1-203ENST00000359759 DAZAP1Q96EP5 407 aaKnown RBP15.13■□□□□ 0.01
COL18A1-203ENST00000359759 TXNDC15Q96J42 360 aa15.13■□□□□ 0.01
COL18A1-203ENST00000359759 IGSF5Q9NSI5 407 aa15.13■□□□□ 0.01
COL18A1-203ENST00000359759 IL37Q9NZH6 218 aa15.13■□□□□ 0.01
COL18A1-203ENST00000359759 FANCGO15287 622 aa15.13■□□□□ 0.01
COL18A1-203ENST00000359759 SNAPINO95295 136 aa15.13■□□□□ 0.01
COL18A1-203ENST00000359759 SORDQ00796 357 aa15.13■□□□□ 0.01
COL18A1-203ENST00000359759 SLC22A6Q4U2R8 563 aa15.13■□□□□ 0.01
COL18A1-203ENST00000359759 ACSM3Q53FZ2 586 aa15.13■□□□□ 0.01
COL18A1-203ENST00000359759 ZNF705AQ6ZN79 300 aaPredicted RBP15.13■□□□□ 0.01
COL18A1-203ENST00000359759 OR7G1Q8NGA0 311 aa15.13■□□□□ 0.01
COL18A1-203ENST00000359759 MACROD1Q9BQ69 325 aa15.13■□□□□ 0.01
COL18A1-203ENST00000359759 E9PI62 339 aa15.13■□□□□ 0.01
COL18A1-203ENST00000359759 HSPB6O14558 160 aa15.13■□□□□ 0.01
COL18A1-203ENST00000359759 OR7A17O14581 309 aa15.13■□□□□ 0.01
COL18A1-203ENST00000359759 BMP1P13497 986 aa15.13■□□□□ 0.01
COL18A1-203ENST00000359759 CCL5P13501 91 aa15.13■□□□□ 0.01
COL18A1-203ENST00000359759 TLE1Q04724 770 aa15.13■□□□□ 0.01
COL18A1-203ENST00000359759 UNQ6126/PRO20091Q6UXV3 157 aa15.13■□□□□ 0.01
COL18A1-203ENST00000359759 RANBP9Q96S59 729 aa15.13■□□□□ 0.01
COL18A1-203ENST00000359759 A6NL46 340 aa15.12■□□□□ 0.01
COL18A1-203ENST00000359759 ARHGAP19Q14CB8 494 aa15.12■□□□□ 0.01
COL18A1-203ENST00000359759 LETMD1Q6P1Q0 360 aa15.12■□□□□ 0.01
COL18A1-203ENST00000359759 SHISA6Q6ZSJ9 500 aa15.12■□□□□ 0.01
COL18A1-203ENST00000359759 VASH1Q7L8A9 365 aaPredicted RBP15.12■□□□□ 0.01
COL18A1-203ENST00000359759 IFNL1Q8IU54 200 aa15.12■□□□□ 0.01
COL18A1-203ENST00000359759 SPIN2AQ99865 258 aa15.12■□□□□ 0.01
COL18A1-203ENST00000359759 SPIN2BQ9BPZ2 258 aa15.12■□□□□ 0.01
COL18A1-203ENST00000359759 NMNAT2Q9BZQ4 307 aa15.12■□□□□ 0.01
COL18A1-203ENST00000359759 DNAJB11Q9UBS4 358 aa15.12■□□□□ 0.01
COL18A1-203ENST00000359759 PCDHGA1Q9Y5H4 931 aa15.12■□□□□ 0.01
COL18A1-203ENST00000359759 PUS1Q9Y606 427 aaKnown RBP eCLIP15.12■□□□□ 0.01
COL18A1-203ENST00000359759 ENPP4Q9Y6X5 453 aa15.12■□□□□ 0.01
COL18A1-203ENST00000359759 LOC285095A0A1B0GVY8 99 aa15.12■□□□□ 0.01
COL18A1-203ENST00000359759 SPOCK1Q08629 439 aa15.12■□□□□ 0.01
COL18A1-203ENST00000359759 INCA1Q0VD86 236 aa15.12■□□□□ 0.01
COL18A1-203ENST00000359759 SULF2Q8IWU5 870 aa15.12■□□□□ 0.01
COL18A1-203ENST00000359759 ZNF439Q8NDP4 499 aa15.12■□□□□ 0.01
COL18A1-203ENST00000359759 RANGRFQ9HD47 186 aaPredicted RBP15.12■□□□□ 0.01
COL18A1-203ENST00000359759 GLTPQ9NZD2 209 aa15.12■□□□□ 0.01
COL18A1-203ENST00000359759 RIMS3Q9UJD0 308 aa15.12■□□□□ 0.01
COL18A1-203ENST00000359759 KLHL33A6NCF5 533 aa15.12■□□□□ 0.01
COL18A1-203ENST00000359759 TXNDC12O95881 172 aa15.12■□□□□ 0.01
COL18A1-203ENST00000359759 ITGB8P26012 769 aa15.12■□□□□ 0.01
COL18A1-203ENST00000359759 FOXA1P55317 472 aa15.12■□□□□ 0.01
COL18A1-203ENST00000359759 FUBP1Q96AE4 644 aaKnown RBP15.12■□□□□ 0.01
COL18A1-203ENST00000359759 ACTR10Q9NZ32 417 aa15.12■□□□□ 0.01
COL18A1-203ENST00000359759 FADS1O60427 444 aa15.12■□□□□ 0.01
COL18A1-203ENST00000359759 ENDOUP21128 410 aaKnown RBP15.12■□□□□ 0.01
COL18A1-203ENST00000359759 CXCR4P61073 352 aa15.12■□□□□ 0.01
COL18A1-203ENST00000359759 GPR19Q15760 415 aa15.12■□□□□ 0.01
COL18A1-203ENST00000359759 EXOSC6Q5RKV6 272 aaKnown RBP15.12■□□□□ 0.01
COL18A1-203ENST00000359759 RELL1Q8IUW5 271 aa15.12■□□□□ 0.01
COL18A1-203ENST00000359759 OR5L2Q8NGL0 311 aa15.12■□□□□ 0.01
COL18A1-203ENST00000359759 CNOT11Q9UKZ1 510 aaKnown RBP15.12■□□□□ 0.01
COL18A1-203ENST00000359759 ROBO1Q9Y6N7 1651 aa15.12■□□□□ 0.01
COL18A1-203ENST00000359759 ACOT7O00154 380 aa15.12■□□□□ 0.01
COL18A1-203ENST00000359759 SOD2P04179 222 aa15.12■□□□□ 0.01
COL18A1-203ENST00000359759 SELENOWP63302 87 aa15.12■□□□□ 0.01
COL18A1-203ENST00000359759 HABP2Q14520 560 aaPredicted RBP15.12■□□□□ 0.01
COL18A1-203ENST00000359759 C18orf63Q68DL7 685 aa15.12■□□□□ 0.01
COL18A1-203ENST00000359759 RNF128Q8TEB7 428 aa15.12■□□□□ 0.01
COL18A1-203ENST00000359759 NANOS1Q8WY41 292 aaKnown RBP15.12■□□□□ 0.01
COL18A1-203ENST00000359759 FOXRED1Q96CU9 486 aaPredicted RBP15.12■□□□□ 0.01
COL18A1-203ENST00000359759 FAM234AQ9H0X4 552 aa15.12■□□□□ 0.01
COL18A1-203ENST00000359759 RASD1Q9Y272 281 aa15.12■□□□□ 0.01
COL18A1-203ENST00000359759 AK1P00568 194 aa15.11■□□□□ 0.01
COL18A1-203ENST00000359759 CLDN6P56747 220 aa15.11■□□□□ 0.01
COL18A1-203ENST00000359759 RIPPLY1Q0D2K3 151 aa15.11■□□□□ 0.01
COL18A1-203ENST00000359759 YIF1BQ5BJH7 314 aa15.11■□□□□ 0.01
COL18A1-203ENST00000359759 OR8J2Q8NGG1 315 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms