RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 FAM87AP0C7U9 286 aa11.35□□□□□ -0.59
NIF3L1-201ENST00000359683 NID1P14543 1247 aa11.35□□□□□ -0.59
NIF3L1-201ENST00000359683 CD46P15529 392 aa11.35□□□□□ -0.59
NIF3L1-201ENST00000359683 ENDOUP21128 410 aaKnown RBP11.35□□□□□ -0.59
NIF3L1-201ENST00000359683 CNR1P21554 472 aa11.35□□□□□ -0.59
NIF3L1-201ENST00000359683 PRKAR1BP31321 381 aa11.35□□□□□ -0.59
NIF3L1-201ENST00000359683 CD97P48960 835 aa11.35□□□□□ -0.59
NIF3L1-201ENST00000359683 EEF1A1P68104 462 aaKnown RBP11.35□□□□□ -0.59
NIF3L1-201ENST00000359683 LARS2Q15031 903 aaKnown RBP11.35□□□□□ -0.59
NIF3L1-201ENST00000359683 DUSP7Q16829 419 aa11.35□□□□□ -0.59
NIF3L1-201ENST00000359683 ZSWIM7Q19AV6 140 aa11.35□□□□□ -0.59
NIF3L1-201ENST00000359683 ZNF311Q5JNZ3 666 aa11.35□□□□□ -0.59
NIF3L1-201ENST00000359683 LCN8Q6JVE9 175 aa11.35□□□□□ -0.59
NIF3L1-201ENST00000359683 DHRS4L2Q6PKH6 230 aa11.35□□□□□ -0.59
NIF3L1-201ENST00000359683 CBLL1Q75N03 491 aa11.35□□□□□ -0.59
NIF3L1-201ENST00000359683 MARCH3Q86UD3 253 aa11.35□□□□□ -0.59
NIF3L1-201ENST00000359683 DHFR2Q86XF0 187 aa11.35□□□□□ -0.59
NIF3L1-201ENST00000359683 ARMC8Q8IUR7 673 aa11.35□□□□□ -0.59
NIF3L1-201ENST00000359683 CMIPQ8IY22 773 aa11.35□□□□□ -0.59
NIF3L1-201ENST00000359683 BHLHE22Q8NFJ8 381 aaPredicted RBP11.35□□□□□ -0.59
NIF3L1-201ENST00000359683 WDR60Q8WVS4 1066 aa11.35□□□□□ -0.59
NIF3L1-201ENST00000359683 CCDC124Q96CT7 223 aaKnown RBP11.35□□□□□ -0.59
NIF3L1-201ENST00000359683 WBP1Q96G27 269 aa11.35□□□□□ -0.59
NIF3L1-201ENST00000359683 ARHGAP9Q9BRR9 750 aa11.35□□□□□ -0.59
NIF3L1-201ENST00000359683 TBL1XR1Q9BZK7 514 aa11.35□□□□□ -0.59
NIF3L1-201ENST00000359683 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.35□□□□□ -0.59
NIF3L1-201ENST00000359683 METTL7AQ9H8H3 244 aa11.35□□□□□ -0.59
NIF3L1-201ENST00000359683 DCAF13Q9NV06 445 aaKnown RBP11.35□□□□□ -0.59
NIF3L1-201ENST00000359683 SEC14L3Q9UDX4 400 aa11.35□□□□□ -0.59
NIF3L1-201ENST00000359683 ZNF443Q9Y2A4 671 aaPredicted RBP11.35□□□□□ -0.59
NIF3L1-201ENST00000359683 NINQ8N4C6 2090 aa11.34□□□□□ -0.59
NIF3L1-201ENST00000359683 TRAV17A0A0B4J275 112 aa11.34□□□□□ -0.59
NIF3L1-201ENST00000359683 CLDN24A6NM45 220 aa11.34□□□□□ -0.59
NIF3L1-201ENST00000359683 NDUFB5O43674 189 aa11.34□□□□□ -0.59
NIF3L1-201ENST00000359683 TPST1O60507 370 aa11.34□□□□□ -0.59
NIF3L1-201ENST00000359683 SNX4O95219 450 aa11.34□□□□□ -0.59
NIF3L1-201ENST00000359683 ANGPTL1O95841 491 aa11.34□□□□□ -0.59
NIF3L1-201ENST00000359683 NQO1P15559 274 aaKnown RBP11.34□□□□□ -0.59
NIF3L1-201ENST00000359683 CD247P20963 164 aa11.34□□□□□ -0.59
NIF3L1-201ENST00000359683 KCNJ5P48544 419 aa11.34□□□□□ -0.59
NIF3L1-201ENST00000359683 SELENOWP63302 87 aa11.34□□□□□ -0.59
NIF3L1-201ENST00000359683 CD226Q15762 336 aa11.34□□□□□ -0.59
NIF3L1-201ENST00000359683 LIN52Q52LA3 116 aa11.34□□□□□ -0.59
NIF3L1-201ENST00000359683 CYBRD1Q53TN4 286 aa11.34□□□□□ -0.59
NIF3L1-201ENST00000359683 PRAMEF20Q5VT98 475 aa11.34□□□□□ -0.59
NIF3L1-201ENST00000359683 RNF220Q5VTB9 566 aa11.34□□□□□ -0.59
NIF3L1-201ENST00000359683 Q6ZS92 163 aa11.34□□□□□ -0.59
NIF3L1-201ENST00000359683 MISPQ8IVT2 679 aa11.34□□□□□ -0.59
NIF3L1-201ENST00000359683 EID3Q8N140 333 aa11.34□□□□□ -0.59
NIF3L1-201ENST00000359683 CLIP4Q8N3C7 705 aa11.34□□□□□ -0.59
NIF3L1-201ENST00000359683 RBMXL3Q8N7X1 1067 aaKnown RBP11.34□□□□□ -0.59
NIF3L1-201ENST00000359683 SMYD1Q8NB12 490 aa11.34□□□□□ -0.59
NIF3L1-201ENST00000359683 SLC26A7Q8TE54 656 aa11.34□□□□□ -0.59
NIF3L1-201ENST00000359683 RASSF5Q8WWW0 418 aa11.34□□□□□ -0.59
NIF3L1-201ENST00000359683 FAM162AQ96A26 154 aa11.34□□□□□ -0.59
NIF3L1-201ENST00000359683 NSMCE2Q96MF7 247 aa11.34□□□□□ -0.59
NIF3L1-201ENST00000359683 OSBPL11Q9BXB4 747 aa11.34□□□□□ -0.59
NIF3L1-201ENST00000359683 PINK1Q9BXM7 581 aa11.34□□□□□ -0.59
NIF3L1-201ENST00000359683 CACYBPQ9HB71 228 aaKnown RBP11.34□□□□□ -0.59
NIF3L1-201ENST00000359683 GALNT9Q9HCQ5 603 aa11.34□□□□□ -0.59
NIF3L1-201ENST00000359683 SDHAF3Q9NRP4 125 aa11.34□□□□□ -0.59
NIF3L1-201ENST00000359683 DEPPQ9NTK1 212 aa11.34□□□□□ -0.59
NIF3L1-201ENST00000359683 OLAHQ9NV23 265 aa11.34□□□□□ -0.59
NIF3L1-201ENST00000359683 KLRF1Q9NZS2 232 aa11.34□□□□□ -0.59
NIF3L1-201ENST00000359683 TP53TG5Q9Y2B4 290 aa11.34□□□□□ -0.59
NIF3L1-201ENST00000359683 SLC35A3Q9Y2D2 325 aa11.34□□□□□ -0.59
NIF3L1-201ENST00000359683 KLF13Q9Y2Y9 288 aaPredicted RBP11.34□□□□□ -0.59
NIF3L1-201ENST00000359683 KALRNO60229 2985 aa11.34□□□□□ -0.59
NIF3L1-201ENST00000359683 ATMQ13315 3056 aa11.33□□□□□ -0.59
NIF3L1-201ENST00000359683 IGLV3-32A0A0A0MS00 114 aa11.33□□□□□ -0.6
NIF3L1-201ENST00000359683 CDHR4A6H8M9 788 aa11.33□□□□□ -0.6
NIF3L1-201ENST00000359683 H3BNH8 94 aa11.33□□□□□ -0.6
NIF3L1-201ENST00000359683 SCO2O43819 266 aa11.33□□□□□ -0.6
NIF3L1-201ENST00000359683 NME2P1O60361 137 aa11.33□□□□□ -0.6
NIF3L1-201ENST00000359683 DPM1O60762 260 aa11.33□□□□□ -0.6
NIF3L1-201ENST00000359683 TRIM3O75382 744 aaPredicted RBP11.33□□□□□ -0.6
NIF3L1-201ENST00000359683 EPPINO95925 133 aa11.33□□□□□ -0.6
NIF3L1-201ENST00000359683 LGI1O95970 557 aa11.33□□□□□ -0.6
NIF3L1-201ENST00000359683 SERPINA1P01009 418 aa11.33□□□□□ -0.6
NIF3L1-201ENST00000359683 OPN1SWP03999 348 aa11.33□□□□□ -0.6
NIF3L1-201ENST00000359683 C8BP07358 591 aa11.33□□□□□ -0.6
NIF3L1-201ENST00000359683 ATP6V1B2P21281 511 aa11.33□□□□□ -0.6
NIF3L1-201ENST00000359683 NME2P22392 152 aa11.33□□□□□ -0.6
NIF3L1-201ENST00000359683 PLAURQ03405 335 aa11.33□□□□□ -0.6
NIF3L1-201ENST00000359683 C17orf67Q0P5P2 114 aa11.33□□□□□ -0.6
NIF3L1-201ENST00000359683 LRRC23Q53EV4 343 aaPredicted RBP11.33□□□□□ -0.6
NIF3L1-201ENST00000359683 ZNF766Q5HY98 468 aa11.33□□□□□ -0.6
NIF3L1-201ENST00000359683 ZNF836Q6ZNA1 936 aa11.33□□□□□ -0.6
NIF3L1-201ENST00000359683 ASB18Q6ZVZ8 466 aa11.33□□□□□ -0.6
NIF3L1-201ENST00000359683 EIF3MQ7L2H7 374 aaKnown RBP11.33□□□□□ -0.6
NIF3L1-201ENST00000359683 SPPL2CQ8IUH8 684 aa11.33□□□□□ -0.6
NIF3L1-201ENST00000359683 GRAMD2AQ8IUY3 354 aa11.33□□□□□ -0.6
NIF3L1-201ENST00000359683 ZNF614Q8N883 585 aa11.33□□□□□ -0.6
NIF3L1-201ENST00000359683 EXD3Q8N9H8 876 aa11.33□□□□□ -0.6
NIF3L1-201ENST00000359683 FAM71CQ8NEG0 241 aa11.33□□□□□ -0.6
NIF3L1-201ENST00000359683 GPR32P1Q8NGA4 272 aa11.33□□□□□ -0.6
NIF3L1-201ENST00000359683 C9orf43Q8TAL5 461 aaPredicted RBP11.33□□□□□ -0.6
NIF3L1-201ENST00000359683 PHOSPHO1Q8TCT1 267 aa11.33□□□□□ -0.6
NIF3L1-201ENST00000359683 DUSP19Q8WTR2 217 aa11.33□□□□□ -0.6
NIF3L1-201ENST00000359683 TMEM41AQ96HV5 264 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms