RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 ZNF607Q96SK3 696 aa4.73□□□□□ -1.65
ATXN3-202ENST00000359366 USB1Q9BQ65 265 aaKnown RBP4.73□□□□□ -1.65
ATXN3-202ENST00000359366 CNPPD1Q9BV87 410 aa4.73□□□□□ -1.65
ATXN3-202ENST00000359366 GTPBP2Q9BX10 602 aaKnown RBP4.73□□□□□ -1.65
ATXN3-202ENST00000359366 ACTRT3Q9BYD9 372 aa4.73□□□□□ -1.65
ATXN3-202ENST00000359366 CCDC90BQ9GZT6 254 aa4.73□□□□□ -1.65
ATXN3-202ENST00000359366 NAA50Q9GZZ1 169 aaKnown RBP4.73□□□□□ -1.65
ATXN3-202ENST00000359366 SIAEQ9HAT2 523 aa4.73□□□□□ -1.65
ATXN3-202ENST00000359366 PDE7BQ9NP56 450 aa4.73□□□□□ -1.65
ATXN3-202ENST00000359366 USE1Q9NZ43 259 aa4.73□□□□□ -1.65
ATXN3-202ENST00000359366 MAT2BQ9NZL9 334 aa4.73□□□□□ -1.65
ATXN3-202ENST00000359366 EXTL2Q9UBQ6 330 aa4.73□□□□□ -1.65
ATXN3-202ENST00000359366 MALT1Q9UDY8 824 aa4.73□□□□□ -1.65
ATXN3-202ENST00000359366 C3orf18Q9UK00 162 aa4.73□□□□□ -1.65
ATXN3-202ENST00000359366 KLK4Q9Y5K2 254 aa4.73□□□□□ -1.65
ATXN3-202ENST00000359366 GMPPBQ9Y5P6 360 aa4.73□□□□□ -1.65
ATXN3-202ENST00000359366 MPDZO75970 2070 aa4.73□□□□□ -1.65
ATXN3-202ENST00000359366 ZFHX4Q86UP3 3567 aa4.73□□□□□ -1.65
ATXN3-202ENST00000359366 URB1O60287 2271 aaKnown RBP4.73□□□□□ -1.65
ATXN3-202ENST00000359366 TLCD2A6NGC4 264 aa4.72□□□□□ -1.65
ATXN3-202ENST00000359366 LILRA5A6NI73 299 aa4.72□□□□□ -1.65
ATXN3-202ENST00000359366 PSMD9O00233 223 aa4.72□□□□□ -1.65
ATXN3-202ENST00000359366 LAMTOR5O43504 91 aa4.72□□□□□ -1.65
ATXN3-202ENST00000359366 DNAJB5O75953 348 aa4.72□□□□□ -1.65
ATXN3-202ENST00000359366 CBX7O95931 251 aa4.72□□□□□ -1.65
ATXN3-202ENST00000359366 HPRP00739 348 aa4.72□□□□□ -1.65
ATXN3-202ENST00000359366 HTR1AP08908 422 aa4.72□□□□□ -1.65
ATXN3-202ENST00000359366 PRG2P13727 222 aa4.72□□□□□ -1.65
ATXN3-202ENST00000359366 ZNF10P21506 573 aaPredicted RBP4.72□□□□□ -1.65
ATXN3-202ENST00000359366 TTKP33981 857 aa4.72□□□□□ -1.65
ATXN3-202ENST00000359366 TRHRP34981 398 aaPredicted RBP4.72□□□□□ -1.65
ATXN3-202ENST00000359366 GSTM5P46439 218 aa4.72□□□□□ -1.65
ATXN3-202ENST00000359366 GSK3AP49840 483 aa4.72□□□□□ -1.65
ATXN3-202ENST00000359366 ENTPD1P49961 510 aa4.72□□□□□ -1.65
ATXN3-202ENST00000359366 RAB38P57729 211 aa4.72□□□□□ -1.65
ATXN3-202ENST00000359366 ISL1P61371 349 aa4.72□□□□□ -1.65
ATXN3-202ENST00000359366 STX4Q12846 297 aa4.72□□□□□ -1.65
ATXN3-202ENST00000359366 MAP4K2Q12851 820 aa4.72□□□□□ -1.65
ATXN3-202ENST00000359366 ZNF155Q12901 538 aaPredicted RBP4.72□□□□□ -1.65
ATXN3-202ENST00000359366 NPRL3Q12980 569 aa4.72□□□□□ -1.65
ATXN3-202ENST00000359366 PMS2P3Q13401 168 aa4.72□□□□□ -1.65
ATXN3-202ENST00000359366 ZNF267Q14586 743 aaPredicted RBP4.72□□□□□ -1.65
ATXN3-202ENST00000359366 CEBPEQ15744 281 aa4.72□□□□□ -1.65
ATXN3-202ENST00000359366 FAM214AQ32MH5 1076 aa4.72□□□□□ -1.65
ATXN3-202ENST00000359366 NDUFAF6Q330K2 333 aa4.72□□□□□ -1.65
ATXN3-202ENST00000359366 TMEM95Q3KNT9 176 aa4.72□□□□□ -1.65
ATXN3-202ENST00000359366 PLK5Q496M5 336 aa4.72□□□□□ -1.65
ATXN3-202ENST00000359366 VWA2Q5GFL6 755 aa4.72□□□□□ -1.65
ATXN3-202ENST00000359366 ZNF691Q5VV52 312 aa4.72□□□□□ -1.65
ATXN3-202ENST00000359366 PMS2CLQ68D20 193 aa4.72□□□□□ -1.65
ATXN3-202ENST00000359366 DESI1Q6ICB0 168 aa4.72□□□□□ -1.65
ATXN3-202ENST00000359366 FAHD1Q6P587 224 aa4.72□□□□□ -1.65
ATXN3-202ENST00000359366 OGFOD3Q6PK18 319 aa4.72□□□□□ -1.65
ATXN3-202ENST00000359366 TMEM64Q6YI46 380 aa4.72□□□□□ -1.65
ATXN3-202ENST00000359366 ZNF574Q6ZN55 896 aaPredicted RBP4.72□□□□□ -1.65
ATXN3-202ENST00000359366 FRRS1Q6ZNA5 592 aa4.72□□□□□ -1.65
ATXN3-202ENST00000359366 BCDIN3DQ7Z5W3 292 aaKnown RBP4.72□□□□□ -1.65
ATXN3-202ENST00000359366 ZBTB46Q86UZ6 589 aa4.72□□□□□ -1.65
ATXN3-202ENST00000359366 OR2L13Q8N349 312 aa4.72□□□□□ -1.65
ATXN3-202ENST00000359366 FAM109AQ8N4B1 249 aa4.72□□□□□ -1.65
ATXN3-202ENST00000359366 IQCF1Q8N6M8 205 aa4.72□□□□□ -1.65
ATXN3-202ENST00000359366 TMEM105Q8N8V8 129 aa4.72□□□□□ -1.65
ATXN3-202ENST00000359366 ASCC1Q8N9N2 400 aaKnown RBP4.72□□□□□ -1.65
ATXN3-202ENST00000359366 OR51Q1Q8NH59 317 aa4.72□□□□□ -1.65
ATXN3-202ENST00000359366 SLC7A13Q8TCU3 470 aa4.72□□□□□ -1.65
ATXN3-202ENST00000359366 SFXN5Q8TD22 340 aa4.72□□□□□ -1.65
ATXN3-202ENST00000359366 PMEPA1Q969W9 287 aa4.72□□□□□ -1.65
ATXN3-202ENST00000359366 OMA1Q96E52 524 aa4.72□□□□□ -1.65
ATXN3-202ENST00000359366 THAP11Q96EK4 314 aa4.72□□□□□ -1.65
ATXN3-202ENST00000359366 ZNF764Q96H86 408 aaPredicted RBP4.72□□□□□ -1.65
ATXN3-202ENST00000359366 ZNF354BQ96LW1 612 aa4.72□□□□□ -1.65
ATXN3-202ENST00000359366 ZNF578Q96N58 590 aaPredicted RBP4.72□□□□□ -1.65
ATXN3-202ENST00000359366 MS4A4EQ96PG1 132 aa4.72□□□□□ -1.65
ATXN3-202ENST00000359366 EPYCQ99645 322 aa4.72□□□□□ -1.65
ATXN3-202ENST00000359366 GPA33Q99795 319 aa4.72□□□□□ -1.65
ATXN3-202ENST00000359366 MROQ9BYG7 248 aa4.72□□□□□ -1.65
ATXN3-202ENST00000359366 ALOXE3Q9BYJ1 711 aa4.72□□□□□ -1.65
ATXN3-202ENST00000359366 ROGDIQ9GZN7 287 aa4.72□□□□□ -1.65
ATXN3-202ENST00000359366 WNT5BQ9H1J7 359 aa4.72□□□□□ -1.65
ATXN3-202ENST00000359366 GAREM1Q9H706 876 aa4.72□□□□□ -1.65
ATXN3-202ENST00000359366 LYRM4Q9HD34 91 aa4.72□□□□□ -1.65
ATXN3-202ENST00000359366 C11orf16Q9NQ32 467 aa4.72□□□□□ -1.65
ATXN3-202ENST00000359366 NECTIN3Q9NQS3 549 aa4.72□□□□□ -1.65
ATXN3-202ENST00000359366 PNO1Q9NRX1 252 aaKnown RBP4.72□□□□□ -1.65
ATXN3-202ENST00000359366 IL20RAQ9UHF4 553 aa4.72□□□□□ -1.65
ATXN3-202ENST00000359366 KCNE5Q9UJ90 142 aa4.72□□□□□ -1.65
ATXN3-202ENST00000359366 CLEC4AQ9UMR7 237 aa4.72□□□□□ -1.65
ATXN3-202ENST00000359366 PCNX3Q9H6A9 2034 aa4.72□□□□□ -1.65
ATXN3-202ENST00000359366 SDK2Q58EX2 2172 aa4.72□□□□□ -1.65
ATXN3-202ENST00000359366 ZFHX2Q9C0A1 2572 aaPredicted RBP4.72□□□□□ -1.65
ATXN3-202ENST00000359366 C17orf51A8MQB3 221 aa4.72□□□□□ -1.65
ATXN3-202ENST00000359366 ATP6V1G2-DDX39BF2Z307 99 aa4.72□□□□□ -1.65
ATXN3-202ENST00000359366 H0YAE9 185 aa4.72□□□□□ -1.65
ATXN3-202ENST00000359366 TAF4O00268 1085 aa4.72□□□□□ -1.65
ATXN3-202ENST00000359366 ADAMDEC1O15204 470 aa4.72□□□□□ -1.65
ATXN3-202ENST00000359366 GMFGO60234 142 aa4.72□□□□□ -1.65
ATXN3-202ENST00000359366 OR10H3O60404 316 aa4.72□□□□□ -1.65
ATXN3-202ENST00000359366 TIAF1O95411 115 aa4.72□□□□□ -1.65
ATXN3-202ENST00000359366 ALPPP05187 535 aa4.72□□□□□ -1.65
ATXN3-202ENST00000359366 RNH1P13489 461 aaKnown RBP4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms