RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 PHF10Q8WUB8 498 aaKnown RBP12.77□□□□□ -0.37
PDLIM5-203ENST00000359265 DHRS1Q96LJ7 313 aa12.77□□□□□ -0.37
PDLIM5-203ENST00000359265 ZNF570Q96NI8 536 aa12.77□□□□□ -0.37
PDLIM5-203ENST00000359265 WDR77Q9BQA1 342 aaPredicted RBP12.77□□□□□ -0.37
PDLIM5-203ENST00000359265 SPRY4Q9C004 299 aa12.77□□□□□ -0.37
PDLIM5-203ENST00000359265 HOXD1Q9GZZ0 328 aa12.77□□□□□ -0.37
PDLIM5-203ENST00000359265 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.77□□□□□ -0.37
PDLIM5-203ENST00000359265 FOXJ2Q9P0K8 574 aa12.77□□□□□ -0.37
PDLIM5-203ENST00000359265 TMCC3Q9ULS5 477 aa12.77□□□□□ -0.37
PDLIM5-203ENST00000359265 CHST2Q9Y4C5 530 aa12.77□□□□□ -0.37
PDLIM5-203ENST00000359265 MAGED1Q9Y5V3 778 aaPredicted RBP12.77□□□□□ -0.37
PDLIM5-203ENST00000359265 ATMQ13315 3056 aa12.77□□□□□ -0.37
PDLIM5-203ENST00000359265 TEX15Q9BXT5 2789 aa12.76□□□□□ -0.37
PDLIM5-203ENST00000359265 MGAQ8IWI9 3026 aa12.76□□□□□ -0.37
PDLIM5-203ENST00000359265 CENPVL1A0A0U1RR11 272 aa12.76□□□□□ -0.37
PDLIM5-203ENST00000359265 NPIPB9F8W1W9 429 aa12.76□□□□□ -0.37
PDLIM5-203ENST00000359265 UMODP07911 640 aa12.76□□□□□ -0.37
PDLIM5-203ENST00000359265 CDH2P19022 906 aaPredicted RBP12.76□□□□□ -0.37
PDLIM5-203ENST00000359265 IGFBP5P24593 272 aa12.76□□□□□ -0.37
PDLIM5-203ENST00000359265 IL12BP29460 328 aa12.76□□□□□ -0.37
PDLIM5-203ENST00000359265 NR0B1P51843 470 aaKnown RBP12.76□□□□□ -0.37
PDLIM5-203ENST00000359265 HMGA2P52926 109 aa12.76□□□□□ -0.37
PDLIM5-203ENST00000359265 TAS2R41P59536 307 aa12.76□□□□□ -0.37
PDLIM5-203ENST00000359265 RNF4P78317 190 aa12.76□□□□□ -0.37
PDLIM5-203ENST00000359265 PLCXD2Q0VAA5 305 aa12.76□□□□□ -0.37
PDLIM5-203ENST00000359265 MED21Q13503 144 aa12.76□□□□□ -0.37
PDLIM5-203ENST00000359265 NPTX1Q15818 432 aa12.76□□□□□ -0.37
PDLIM5-203ENST00000359265 MAPK14Q16539 360 aa12.76□□□□□ -0.37
PDLIM5-203ENST00000359265 EXOC3L2Q2M3D2 409 aa12.76□□□□□ -0.37
PDLIM5-203ENST00000359265 FGD3Q5JSP0 725 aa12.76□□□□□ -0.37
PDLIM5-203ENST00000359265 PDZK1Q5T2W1 519 aa12.76□□□□□ -0.37
PDLIM5-203ENST00000359265 C6orf52Q5T4I8 152 aa12.76□□□□□ -0.37
PDLIM5-203ENST00000359265 HSDL2Q6YN16 418 aa12.76□□□□□ -0.37
PDLIM5-203ENST00000359265 PLEKHM3Q6ZWE6 761 aa12.76□□□□□ -0.37
PDLIM5-203ENST00000359265 RBM45Q8IUH3 476 aaKnown RBP12.76□□□□□ -0.37
PDLIM5-203ENST00000359265 CMIPQ8IY22 773 aa12.76□□□□□ -0.37
PDLIM5-203ENST00000359265 OFCC1Q8IZS5 231 aa12.76□□□□□ -0.37
PDLIM5-203ENST00000359265 SLC34A3Q8N130 599 aa12.76□□□□□ -0.37
PDLIM5-203ENST00000359265 CLIP4Q8N3C7 705 aa12.76□□□□□ -0.37
PDLIM5-203ENST00000359265 DHRSXQ8N5I4 330 aa12.76□□□□□ -0.37
PDLIM5-203ENST00000359265 ZNF441Q8N8Z8 693 aa12.76□□□□□ -0.37
PDLIM5-203ENST00000359265 ZNF527Q8NB42 609 aa12.76□□□□□ -0.37
PDLIM5-203ENST00000359265 ZSCAN1Q8NBB4 408 aa12.76□□□□□ -0.37
PDLIM5-203ENST00000359265 OR10G2Q8NGC3 310 aa12.76□□□□□ -0.37
PDLIM5-203ENST00000359265 OR8K3Q8NH51 312 aa12.76□□□□□ -0.37
PDLIM5-203ENST00000359265 NUBPLQ8TB37 319 aa12.76□□□□□ -0.37
PDLIM5-203ENST00000359265 CT55Q8WUE5 264 aa12.76□□□□□ -0.37
PDLIM5-203ENST00000359265 TP53INP1Q96A56 240 aa12.76□□□□□ -0.37
PDLIM5-203ENST00000359265 EFHD2Q96C19 240 aaPredicted RBP12.76□□□□□ -0.37
PDLIM5-203ENST00000359265 ALPK1Q96QP1 1244 aa12.76□□□□□ -0.37
PDLIM5-203ENST00000359265 MCHR1Q99705 422 aa12.76□□□□□ -0.37
PDLIM5-203ENST00000359265 ADI1Q9BV57 179 aa12.76□□□□□ -0.37
PDLIM5-203ENST00000359265 FNDC11Q9BVV2 318 aa12.76□□□□□ -0.37
PDLIM5-203ENST00000359265 POLR2J2Q9GZM3 115 aaKnown RBP12.76□□□□□ -0.37
PDLIM5-203ENST00000359265 NRSN2Q9GZP1 204 aa12.76□□□□□ -0.37
PDLIM5-203ENST00000359265 POLR2J3Q9H1A7 115 aaKnown RBP12.76□□□□□ -0.37
PDLIM5-203ENST00000359265 SMURF2Q9HAU4 748 aa12.76□□□□□ -0.37
PDLIM5-203ENST00000359265 ACER3Q9NUN7 267 aa12.76□□□□□ -0.37
PDLIM5-203ENST00000359265 RHCGQ9UBD6 479 aa12.76□□□□□ -0.37
PDLIM5-203ENST00000359265 TESQ9UGI8 421 aaKnown RBP12.76□□□□□ -0.37
PDLIM5-203ENST00000359265 KCNE5Q9UJ90 142 aa12.76□□□□□ -0.37
PDLIM5-203ENST00000359265 A4GNTQ9UNA3 340 aa12.76□□□□□ -0.37
PDLIM5-203ENST00000359265 TRBV11-1A0A0K0K1C0 115 aa12.75□□□□□ -0.37
PDLIM5-203ENST00000359265 CDHR4A6H8M9 788 aa12.75□□□□□ -0.37
PDLIM5-203ENST00000359265 ARRDC5A6NEK1 342 aa12.75□□□□□ -0.37
PDLIM5-203ENST00000359265 CDRT15L2A8MXV6 281 aa12.75□□□□□ -0.37
PDLIM5-203ENST00000359265 C21orf140B9A014 251 aa12.75□□□□□ -0.37
PDLIM5-203ENST00000359265 FAAHO00519 579 aa12.75□□□□□ -0.37
PDLIM5-203ENST00000359265 DLGAP1O14490 977 aa12.75□□□□□ -0.37
PDLIM5-203ENST00000359265 FFAR1O14842 300 aa12.75□□□□□ -0.37
PDLIM5-203ENST00000359265 FRS3O43559 492 aa12.75□□□□□ -0.37
PDLIM5-203ENST00000359265 DENRO43583 198 aaKnown RBP12.75□□□□□ -0.37
PDLIM5-203ENST00000359265 RAD1O60671 282 aa12.75□□□□□ -0.37
PDLIM5-203ENST00000359265 REM1O75628 298 aa12.75□□□□□ -0.37
PDLIM5-203ENST00000359265 KLF7O75840 302 aaPredicted RBP12.75□□□□□ -0.37
PDLIM5-203ENST00000359265 CCNB2O95067 398 aa12.75□□□□□ -0.37
PDLIM5-203ENST00000359265 OXSR1O95747 527 aaPredicted RBP12.75□□□□□ -0.37
PDLIM5-203ENST00000359265 ANXA8P13928 327 aa12.75□□□□□ -0.37
PDLIM5-203ENST00000359265 TCN2P20062 427 aa12.75□□□□□ -0.37
PDLIM5-203ENST00000359265 PRKACGP22612 351 aa12.75□□□□□ -0.37
PDLIM5-203ENST00000359265 EIF2S3P41091 472 aaKnown RBP12.75□□□□□ -0.37
PDLIM5-203ENST00000359265 LIMS1P48059 325 aa12.75□□□□□ -0.37
PDLIM5-203ENST00000359265 NRG3P56975 720 aa12.75□□□□□ -0.37
PDLIM5-203ENST00000359265 RPS15P62841 145 aaKnown RBP12.75□□□□□ -0.37
PDLIM5-203ENST00000359265 MERTKQ12866 999 aa12.75□□□□□ -0.37
PDLIM5-203ENST00000359265 FGFBP1Q14512 234 aa12.75□□□□□ -0.37
PDLIM5-203ENST00000359265 LAPTM4AQ15012 233 aa12.75□□□□□ -0.37
PDLIM5-203ENST00000359265 PCOLCEQ15113 449 aa12.75□□□□□ -0.37
PDLIM5-203ENST00000359265 MICAQ29983 383 aa12.75□□□□□ -0.37
PDLIM5-203ENST00000359265 NHSL2Q5HYW2 709 aa12.75□□□□□ -0.37
PDLIM5-203ENST00000359265 FAHD1Q6P587 224 aa12.75□□□□□ -0.37
PDLIM5-203ENST00000359265 TIPARPQ7Z3E1 657 aaKnown RBP12.75□□□□□ -0.37
PDLIM5-203ENST00000359265 GRAMD2AQ8IUY3 354 aa12.75□□□□□ -0.37
PDLIM5-203ENST00000359265 ATG16L2Q8NAA4 619 aa12.75□□□□□ -0.37
PDLIM5-203ENST00000359265 APCDD1LQ8NCL9 501 aa12.75□□□□□ -0.37
PDLIM5-203ENST00000359265 OR5L2Q8NGL0 311 aa12.75□□□□□ -0.37
PDLIM5-203ENST00000359265 OR52J3Q8NH60 311 aa12.75□□□□□ -0.37
PDLIM5-203ENST00000359265 DIO2Q92813 273 aa12.75□□□□□ -0.37
PDLIM5-203ENST00000359265 SLC35B4Q969S0 331 aa12.75□□□□□ -0.37
PDLIM5-203ENST00000359265 C8orf44Q96CB5 159 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms