RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 C19orf25Q9UFG5 118 aaPredicted RBP12.89□□□□□ -0.35
VCP-201ENST00000358901 KCNIP3Q9Y2W7 256 aa12.89□□□□□ -0.35
VCP-201ENST00000358901 ASB1Q9Y576 335 aa12.89□□□□□ -0.35
VCP-201ENST00000358901 FAM221BA6H8Z2 402 aa12.89□□□□□ -0.35
VCP-201ENST00000358901 FXYD1O00168 92 aa12.89□□□□□ -0.35
VCP-201ENST00000358901 APBB3O95704 486 aa12.89□□□□□ -0.35
VCP-201ENST00000358901 ENDOUP21128 410 aaKnown RBP12.89□□□□□ -0.35
VCP-201ENST00000358901 SNTA1Q13424 505 aa12.89□□□□□ -0.35
VCP-201ENST00000358901 ALG10Q5BKT4 473 aa12.89□□□□□ -0.35
VCP-201ENST00000358901 ELP2Q6IA86 826 aa12.89□□□□□ -0.35
VCP-201ENST00000358901 KIF18BQ86Y91 864 aa12.89□□□□□ -0.35
VCP-201ENST00000358901 WFDC5Q8TCV5 224 aa12.89□□□□□ -0.35
VCP-201ENST00000358901 UBTD2Q8WUN7 234 aa12.89□□□□□ -0.35
VCP-201ENST00000358901 CNOT9Q92600 299 aaKnown RBP12.89□□□□□ -0.35
VCP-201ENST00000358901 DEFB126Q9BYW3 111 aa12.89□□□□□ -0.35
VCP-201ENST00000358901 SLA2Q9H6Q3 261 aa12.89□□□□□ -0.35
VCP-201ENST00000358901 PARPBPQ9NWS1 579 aa12.89□□□□□ -0.35
VCP-201ENST00000358901 NDUFAF4Q9P032 175 aa12.89□□□□□ -0.35
VCP-201ENST00000358901 RABL2AQ9UBK7 228 aaPredicted RBP12.89□□□□□ -0.35
VCP-201ENST00000358901 RABL2BQ9UNT1 228 aa12.89□□□□□ -0.35
VCP-201ENST00000358901 FURINP09958 794 aa12.89□□□□□ -0.35
VCP-201ENST00000358901 AKR1C4P17516 323 aa12.89□□□□□ -0.35
VCP-201ENST00000358901 RORAP35398 523 aa12.89□□□□□ -0.35
VCP-201ENST00000358901 NKX3-2P78367 333 aa12.89□□□□□ -0.35
VCP-201ENST00000358901 EXOSC7Q15024 291 aaKnown RBP12.89□□□□□ -0.35
VCP-201ENST00000358901 CHRFAM7AQ494W8 412 aa12.89□□□□□ -0.35
VCP-201ENST00000358901 FAM198BQ6UWH4 519 aa12.89□□□□□ -0.35
VCP-201ENST00000358901 SLC35F2Q8IXU6 374 aa12.89□□□□□ -0.35
VCP-201ENST00000358901 PNPLA2Q96AD5 504 aa12.89□□□□□ -0.35
VCP-201ENST00000358901 CXorf36Q9H7Y0 433 aa12.89□□□□□ -0.35
VCP-201ENST00000358901 GMEB2Q9UKD1 530 aa12.89□□□□□ -0.35
VCP-201ENST00000358901 POU2F3Q9UKI9 436 aa12.89□□□□□ -0.35
VCP-201ENST00000358901 A0A0A6YYC8 382 aaPredicted RBP12.88□□□□□ -0.35
VCP-201ENST00000358901 A0A0G2JMP0 313 aa12.88□□□□□ -0.35
VCP-201ENST00000358901 I3L1I5 382 aaPredicted RBP12.88□□□□□ -0.35
VCP-201ENST00000358901 ARPC1BO15143 372 aaKnown RBP12.88□□□□□ -0.35
VCP-201ENST00000358901 PRAMEF2O60811 474 aa12.88□□□□□ -0.35
VCP-201ENST00000358901 AGTR1P30556 359 aa12.88□□□□□ -0.35
VCP-201ENST00000358901 ERVK-25P63136 954 aa12.88□□□□□ -0.35
VCP-201ENST00000358901 NKPD1Q17RQ9 610 aa12.88□□□□□ -0.35
VCP-201ENST00000358901 C1orf189Q5VU69 101 aa12.88□□□□□ -0.35
VCP-201ENST00000358901 SLC18B1Q6NT16 456 aa12.88□□□□□ -0.35
VCP-201ENST00000358901 GAREM2Q75VX8 874 aa12.88□□□□□ -0.35
VCP-201ENST00000358901 OR4M2Q8NGB6 313 aa12.88□□□□□ -0.35
VCP-201ENST00000358901 OR13C3Q8NGS6 347 aa12.88□□□□□ -0.35
VCP-201ENST00000358901 C16orf58Q96GQ5 468 aa12.88□□□□□ -0.35
VCP-201ENST00000358901 ZNF304Q9HCX3 659 aa12.88□□□□□ -0.35
VCP-201ENST00000358901 LTB4R2Q9NPC1 389 aa12.88□□□□□ -0.35
VCP-201ENST00000358901 KCNN3Q9UGI6 736 aa12.88□□□□□ -0.35
VCP-201ENST00000358901 TVP23AA6NH52 213 aa12.88□□□□□ -0.35
VCP-201ENST00000358901 SBK3P0C264 359 aa12.88□□□□□ -0.35
VCP-201ENST00000358901 PVRP15151 417 aa12.88□□□□□ -0.35
VCP-201ENST00000358901 JUNBP17275 347 aaPredicted RBP12.88□□□□□ -0.35
VCP-201ENST00000358901 GRM7Q14831 915 aa12.88□□□□□ -0.35
VCP-201ENST00000358901 CD300LFQ8TDQ1 290 aa12.88□□□□□ -0.35
VCP-201ENST00000358901 ELP5Q8TE02 316 aa12.88□□□□□ -0.35
VCP-201ENST00000358901 ZDHHC1Q8WTX9 485 aa12.88□□□□□ -0.35
VCP-201ENST00000358901 CPNE2Q96FN4 548 aaPredicted RBP12.88□□□□□ -0.35
VCP-201ENST00000358901 PITX2Q99697 317 aa12.88□□□□□ -0.35
VCP-201ENST00000358901 RANGRFQ9HD47 186 aaPredicted RBP12.88□□□□□ -0.35
VCP-201ENST00000358901 STARD5Q9NSY2 213 aa12.88□□□□□ -0.35
VCP-201ENST00000358901 MARCH5Q9NX47 278 aa12.88□□□□□ -0.35
VCP-201ENST00000358901 ACTR10Q9NZ32 417 aa12.88□□□□□ -0.35
VCP-201ENST00000358901 TRPM3Q9HCF6 1732 aaPredicted RBP12.88□□□□□ -0.35
VCP-201ENST00000358901 KNTC1P50748 2209 aa12.88□□□□□ -0.35
VCP-201ENST00000358901 ZNF705EA8MWA4 302 aaPredicted RBP12.88□□□□□ -0.35
VCP-201ENST00000358901 SLC22A5O76082 557 aa12.88□□□□□ -0.35
VCP-201ENST00000358901 THEGLP0DJG4 465 aa12.88□□□□□ -0.35
VCP-201ENST00000358901 AMY2BP19961 511 aa12.88□□□□□ -0.35
VCP-201ENST00000358901 APEX1P27695 318 aaKnown RBP12.88□□□□□ -0.35
VCP-201ENST00000358901 PBX2P40425 430 aa12.88□□□□□ -0.35
VCP-201ENST00000358901 TSPAN31Q12999 210 aa12.88□□□□□ -0.35
VCP-201ENST00000358901 METTL11BQ5VVY1 283 aa12.88□□□□□ -0.35
VCP-201ENST00000358901 FAM83HQ6ZRV2 1179 aaPredicted RBP12.88□□□□□ -0.35
VCP-201ENST00000358901 GALNT6Q8NCL4 622 aa12.88□□□□□ -0.35
VCP-201ENST00000358901 OLIG1Q8TAK6 271 aa12.88□□□□□ -0.35
VCP-201ENST00000358901 MCCC2Q9HCC0 563 aa12.88□□□□□ -0.35
VCP-201ENST00000358901 OR6C2Q9NZP2 312 aa12.88□□□□□ -0.35
VCP-201ENST00000358901 ERVK-19Q9WJR5 959 aa12.88□□□□□ -0.35
VCP-201ENST00000358901 YARS2Q9Y2Z4 477 aaKnown RBP12.88□□□□□ -0.35
VCP-201ENST00000358901 RFPL3O75679 317 aa12.88□□□□□ -0.35
VCP-201ENST00000358901 HNRNPA2B1P22626 353 aaKnown RBP12.88□□□□□ -0.35
VCP-201ENST00000358901 CASP3P42574 277 aa12.88□□□□□ -0.35
VCP-201ENST00000358901 SLC6A11P48066 632 aa12.88□□□□□ -0.35
VCP-201ENST00000358901 LSSP48449 732 aa12.88□□□□□ -0.35
VCP-201ENST00000358901 DCST2Q5T1A1 773 aa12.88□□□□□ -0.35
VCP-201ENST00000358901 AGAP7PQ5VUJ5 663 aa12.88□□□□□ -0.35
VCP-201ENST00000358901 ANKRD34AQ69YU3 496 aa12.88□□□□□ -0.35
VCP-201ENST00000358901 BCDIN3DQ7Z5W3 292 aaKnown RBP12.88□□□□□ -0.35
VCP-201ENST00000358901 GPR148Q8TDV2 347 aa12.88□□□□□ -0.35
VCP-201ENST00000358901 PGAM5Q96HS1 289 aa12.88□□□□□ -0.35
VCP-201ENST00000358901 KATNBL1Q9H079 304 aa12.88□□□□□ -0.35
VCP-201ENST00000358901 OCEL1Q9H607 264 aa12.88□□□□□ -0.35
VCP-201ENST00000358901 PPP4R1LQ9P1A2 415 aa12.88□□□□□ -0.35
VCP-201ENST00000358901 SGK494L7N484 410 aa12.87□□□□□ -0.35
VCP-201ENST00000358901 NCR1O76036 304 aa12.87□□□□□ -0.35
VCP-201ENST00000358901 ERCC1P07992 297 aaPredicted RBP12.87□□□□□ -0.35
VCP-201ENST00000358901 FBLP22087 321 aaKnown RBP12.87□□□□□ -0.35
VCP-201ENST00000358901 HTR2AP28223 471 aa12.87□□□□□ -0.35
VCP-201ENST00000358901 RPL34P49207 117 aaKnown RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms