RNA–Protein interactions for RNA: ENST00000358771.4

SIRPA-202, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-202ENST00000358771 COPS7AQ9UBW8 275 aa13.29□□□□□ -0.28
SIRPA-202ENST00000358771 CTSVO60911 334 aa13.29□□□□□ -0.28
SIRPA-202ENST00000358771 APBB3O95704 486 aa13.29□□□□□ -0.28
SIRPA-202ENST00000358771 MT-ND5P03915 603 aa13.29□□□□□ -0.28
SIRPA-202ENST00000358771 PCMT1P22061 227 aa13.29□□□□□ -0.28
SIRPA-202ENST00000358771 STAT5AP42229 794 aa13.29□□□□□ -0.28
SIRPA-202ENST00000358771 MVDP53602 400 aa13.29□□□□□ -0.28
SIRPA-202ENST00000358771 RUNX2Q13950 521 aa13.29□□□□□ -0.28
SIRPA-202ENST00000358771 GDF7Q7Z4P5 450 aa13.29□□□□□ -0.28
SIRPA-202ENST00000358771 POMGNT2Q8NAT1 580 aa13.29□□□□□ -0.28
SIRPA-202ENST00000358771 OR4D11Q8NGI4 311 aa13.29□□□□□ -0.28
SIRPA-202ENST00000358771 TMEM163Q8TC26 289 aa13.29□□□□□ -0.28
SIRPA-202ENST00000358771 SFXN5Q8TD22 340 aa13.29□□□□□ -0.28
SIRPA-202ENST00000358771 SP7Q8TDD2 431 aaPredicted RBP13.29□□□□□ -0.28
SIRPA-202ENST00000358771 PIGKQ92643 395 aa13.29□□□□□ -0.28
SIRPA-202ENST00000358771 HS6ST2Q96MM7 605 aa13.29□□□□□ -0.28
SIRPA-202ENST00000358771 SLC6A18Q96N87 628 aa13.29□□□□□ -0.28
SIRPA-202ENST00000358771 NECTIN4Q96NY8 510 aa13.29□□□□□ -0.28
SIRPA-202ENST00000358771 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.29□□□□□ -0.28
SIRPA-202ENST00000358771 MRPS17Q9Y2R5 130 aaKnown RBP13.29□□□□□ -0.28
SIRPA-202ENST00000358771 NEUROG3Q9Y4Z2 214 aa13.29□□□□□ -0.28
SIRPA-202ENST00000358771 GPC6Q9Y625 555 aaPredicted RBP13.29□□□□□ -0.28
SIRPA-202ENST00000358771 LAMA3Q16787 3333 aa13.28□□□□□ -0.28
SIRPA-202ENST00000358771 A0A1W2PRQ8 180 aa13.28□□□□□ -0.28
SIRPA-202ENST00000358771 GXYLT2A0PJZ3 443 aa13.28□□□□□ -0.28
SIRPA-202ENST00000358771 FFAR1O14842 300 aa13.28□□□□□ -0.28
SIRPA-202ENST00000358771 SCO2O43819 266 aa13.28□□□□□ -0.28
SIRPA-202ENST00000358771 RPS25P62851 125 aaKnown RBP13.28□□□□□ -0.28
SIRPA-202ENST00000358771 E2F2Q14209 437 aa13.28□□□□□ -0.28
SIRPA-202ENST00000358771 PGGHGQ32M88 737 aa13.28□□□□□ -0.28
SIRPA-202ENST00000358771 C11orf91Q3C1V1 193 aa13.28□□□□□ -0.28
SIRPA-202ENST00000358771 UBE2UQ5VVX9 321 aa13.28□□□□□ -0.28
SIRPA-202ENST00000358771 UBE3DQ7Z6J8 389 aa13.28□□□□□ -0.28
SIRPA-202ENST00000358771 CHPT1Q8WUD6 406 aa13.28□□□□□ -0.28
SIRPA-202ENST00000358771 PLA2G12AQ9BZM1 189 aa13.28□□□□□ -0.28
SIRPA-202ENST00000358771 FBRSQ9HAH7 460 aa13.28□□□□□ -0.28
SIRPA-202ENST00000358771 EXTL2Q9UBQ6 330 aa13.28□□□□□ -0.28
SIRPA-202ENST00000358771 GPR55Q9Y2T6 319 aaPredicted RBP13.28□□□□□ -0.28
SIRPA-202ENST00000358771 ENTPD2Q9Y5L3 495 aa13.28□□□□□ -0.28
SIRPA-202ENST00000358771 RP1P56715 2156 aa13.28□□□□□ -0.28
SIRPA-202ENST00000358771 A0A1W2PPV9 198 aa13.28□□□□□ -0.28
SIRPA-202ENST00000358771 SERTM1A2A2V5 107 aa13.28□□□□□ -0.28
SIRPA-202ENST00000358771 M0R082 166 aa13.28□□□□□ -0.28
SIRPA-202ENST00000358771 GPX5O75715 221 aa13.28□□□□□ -0.28
SIRPA-202ENST00000358771 ST6GAL1P15907 406 aa13.28□□□□□ -0.28
SIRPA-202ENST00000358771 RPS19P39019 145 aaKnown RBP13.28□□□□□ -0.28
SIRPA-202ENST00000358771 DHPSP49366 369 aaPredicted RBP13.28□□□□□ -0.28
SIRPA-202ENST00000358771 GBX2P52951 348 aaPredicted RBP13.28□□□□□ -0.28
SIRPA-202ENST00000358771 OR52I1Q8NGK6 324 aa13.28□□□□□ -0.28
SIRPA-202ENST00000358771 SMAP2Q8WU79 429 aaPredicted RBP13.28□□□□□ -0.28
SIRPA-202ENST00000358771 TRIM2Q9C040 744 aa13.28□□□□□ -0.28
SIRPA-202ENST00000358771 SLC2A4RGQ9NR83 387 aa13.28□□□□□ -0.28
SIRPA-202ENST00000358771 MRTO4Q9UKD2 239 aaKnown RBP13.28□□□□□ -0.28
SIRPA-202ENST00000358771 ARHGEF17Q96PE2 2063 aaPredicted RBP13.28□□□□□ -0.28
SIRPA-202ENST00000358771 ASXL3Q9C0F0 2248 aa13.28□□□□□ -0.28
SIRPA-202ENST00000358771 NCOR1O75376 2440 aa13.28□□□□□ -0.28
SIRPA-202ENST00000358771 CXCR1P25024 350 aa13.28□□□□□ -0.28
SIRPA-202ENST00000358771 SRSF5Q13243 272 aaKnown RBP13.28□□□□□ -0.28
SIRPA-202ENST00000358771 Q8N402 240 aa13.28□□□□□ -0.28
SIRPA-202ENST00000358771 ZNF248Q8NDW4 579 aa13.28□□□□□ -0.28
SIRPA-202ENST00000358771 YIPF6Q96EC8 236 aa13.28□□□□□ -0.28
SIRPA-202ENST00000358771 ALG8Q9BVK2 526 aa13.28□□□□□ -0.28
SIRPA-202ENST00000358771 SLC22A4Q9H015 551 aa13.28□□□□□ -0.28
SIRPA-202ENST00000358771 MMP28Q9H239 520 aa13.28□□□□□ -0.28
SIRPA-202ENST00000358771 ZNF576Q9H609 170 aa13.28□□□□□ -0.28
SIRPA-202ENST00000358771 NT5DC2Q9H857 520 aa13.28□□□□□ -0.28
SIRPA-202ENST00000358771 ASB4Q9Y574 426 aa13.28□□□□□ -0.28
SIRPA-202ENST00000358771 ETV5P41161 510 aa13.27□□□□□ -0.28
SIRPA-202ENST00000358771 ETV1P50549 477 aa13.27□□□□□ -0.28
SIRPA-202ENST00000358771 PPP1CAP62136 330 aa13.27□□□□□ -0.28
SIRPA-202ENST00000358771 MRPS21P82921 87 aaKnown RBP13.27□□□□□ -0.28
SIRPA-202ENST00000358771 DMPKQ09013 629 aa13.27□□□□□ -0.28
SIRPA-202ENST00000358771 ZNF181Q2M3W8 571 aa13.27□□□□□ -0.28
SIRPA-202ENST00000358771 MINDY2Q8NBR6 621 aa13.27□□□□□ -0.28
SIRPA-202ENST00000358771 SLC38A1Q9H2H9 487 aa13.27□□□□□ -0.28
SIRPA-202ENST00000358771 TMEM5Q9Y2B1 443 aa13.27□□□□□ -0.28
SIRPA-202ENST00000358771 CDH10Q9Y6N8 788 aa13.27□□□□□ -0.28
SIRPA-202ENST00000358771 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.27□□□□□ -0.29
SIRPA-202ENST00000358771 METTL15A6NJ78 407 aa13.27□□□□□ -0.29
SIRPA-202ENST00000358771 K7EQS6 105 aa13.27□□□□□ -0.29
SIRPA-202ENST00000358771 PCBP3P57721 371 aaKnown RBP13.27□□□□□ -0.29
SIRPA-202ENST00000358771 TP53I3Q53FA7 332 aa13.27□□□□□ -0.29
SIRPA-202ENST00000358771 SIMC1Q8NDZ2 872 aa13.27□□□□□ -0.29
SIRPA-202ENST00000358771 PFN4Q8NHR9 129 aa13.27□□□□□ -0.29
SIRPA-202ENST00000358771 THEM6Q8WUY1 208 aa13.27□□□□□ -0.29
SIRPA-202ENST00000358771 CNOT9Q92600 299 aaKnown RBP13.27□□□□□ -0.29
SIRPA-202ENST00000358771 PPP1R14BQ96C90 147 aa13.27□□□□□ -0.29
SIRPA-202ENST00000358771 SDF2Q99470 211 aa13.27□□□□□ -0.29
SIRPA-202ENST00000358771 POLDIP3Q9BY77 421 aaKnown RBP13.27□□□□□ -0.29
SIRPA-202ENST00000358771 A4GNTQ9UNA3 340 aa13.27□□□□□ -0.29
SIRPA-202ENST00000358771 IER3IP1Q9Y5U9 82 aa13.27□□□□□ -0.29
SIRPA-202ENST00000358771 KIR2DS5A0A0G2JLQ3 304 aa13.27□□□□□ -0.29
SIRPA-202ENST00000358771 A0A0G2JNG1 304 aa13.27□□□□□ -0.29
SIRPA-202ENST00000358771 KIR2DS3K7RE56 304 aa13.27□□□□□ -0.29
SIRPA-202ENST00000358771 PCBP4P57723 403 aaKnown RBP13.27□□□□□ -0.29
SIRPA-202ENST00000358771 KIR2DS5Q14953 304 aa13.27□□□□□ -0.29
SIRPA-202ENST00000358771 NSDHLQ15738 373 aa13.27□□□□□ -0.29
SIRPA-202ENST00000358771 NKAIN2Q5VXU1 208 aa13.27□□□□□ -0.29
SIRPA-202ENST00000358771 TMEM92Q6UXU6 159 aa13.27□□□□□ -0.29
SIRPA-202ENST00000358771 NANOGNBQ7Z5D8 188 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms