RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 KLHL12Q53G59 568 aa7.99□□□□□ -1.13
RFX3-202ENST00000358730 MRPL2Q5T653 305 aaKnown RBP7.99□□□□□ -1.13
RFX3-202ENST00000358730 MZT2BQ6NZ67 158 aa7.99□□□□□ -1.13
RFX3-202ENST00000358730 METAP1DQ6UB28 335 aaPredicted RBP7.99□□□□□ -1.13
RFX3-202ENST00000358730 SAMD14Q8IZD0 417 aaPredicted RBP7.99□□□□□ -1.13
RFX3-202ENST00000358730 ACBD7Q8N6N7 88 aa7.99□□□□□ -1.13
RFX3-202ENST00000358730 LILRB4Q8NHJ6 448 aa7.99□□□□□ -1.13
RFX3-202ENST00000358730 BRIX1Q8TDN6 353 aaKnown RBP7.99□□□□□ -1.13
RFX3-202ENST00000358730 SENP5Q96HI0 755 aaPredicted RBP7.99□□□□□ -1.13
RFX3-202ENST00000358730 CD180Q99467 661 aa7.99□□□□□ -1.13
RFX3-202ENST00000358730 SDF2Q99470 211 aa7.99□□□□□ -1.13
RFX3-202ENST00000358730 SOSTQ9BQB4 213 aa7.99□□□□□ -1.13
RFX3-202ENST00000358730 TMEM246Q9BRR3 403 aa7.99□□□□□ -1.13
RFX3-202ENST00000358730 ALG8Q9BVK2 526 aa7.99□□□□□ -1.13
RFX3-202ENST00000358730 KCNN2Q9H2S1 579 aa7.99□□□□□ -1.13
RFX3-202ENST00000358730 CERS4Q9HA82 394 aa7.99□□□□□ -1.13
RFX3-202ENST00000358730 RBFOX1Q9NWB1 397 aaKnown RBP7.99□□□□□ -1.13
RFX3-202ENST00000358730 NTMQ9P121 344 aa7.99□□□□□ -1.13
RFX3-202ENST00000358730 CLCA3PQ9Y6N3 262 aa7.99□□□□□ -1.13
RFX3-202ENST00000358730 NPIPA5A0A0B4J1W7 369 aa7.99□□□□□ -1.13
RFX3-202ENST00000358730 SYNDIG1LA6NDD5 238 aa7.99□□□□□ -1.13
RFX3-202ENST00000358730 NPIPA7E9PJI5 369 aa7.99□□□□□ -1.13
RFX3-202ENST00000358730 GTPBP1O00178 669 aaKnown RBP7.99□□□□□ -1.13
RFX3-202ENST00000358730 LYRM1O43325 122 aa7.99□□□□□ -1.13
RFX3-202ENST00000358730 B3GALT2O43825 422 aa7.99□□□□□ -1.13
RFX3-202ENST00000358730 YES1P07947 543 aa7.99□□□□□ -1.13
RFX3-202ENST00000358730 THBS1P07996 1170 aa7.99□□□□□ -1.13
RFX3-202ENST00000358730 NPIPA8P0DM63 369 aa7.99□□□□□ -1.13
RFX3-202ENST00000358730 IFI30P13284 250 aa7.99□□□□□ -1.13
RFX3-202ENST00000358730 BMP7P18075 431 aa7.99□□□□□ -1.13
RFX3-202ENST00000358730 HTR2AP28223 471 aa7.99□□□□□ -1.13
RFX3-202ENST00000358730 SLC16A1P53985 500 aa7.99□□□□□ -1.13
RFX3-202ENST00000358730 PPP2CBP62714 309 aa7.99□□□□□ -1.13
RFX3-202ENST00000358730 PPP2CAP67775 309 aa7.99□□□□□ -1.13
RFX3-202ENST00000358730 CSTF1Q05048 431 aaKnown RBP7.99□□□□□ -1.13
RFX3-202ENST00000358730 DUSP8Q13202 625 aa7.99□□□□□ -1.13
RFX3-202ENST00000358730 MAPK14Q16539 360 aa7.99□□□□□ -1.13
RFX3-202ENST00000358730 TRMT12Q53H54 448 aaKnown RBP7.99□□□□□ -1.13
RFX3-202ENST00000358730 PAMR1Q6UXH9 720 aa7.99□□□□□ -1.13
RFX3-202ENST00000358730 WDR88Q6ZMY6 472 aa7.99□□□□□ -1.13
RFX3-202ENST00000358730 TMEM91Q6ZNR0 172 aa7.99□□□□□ -1.13
RFX3-202ENST00000358730 NOXA1Q86UR1 476 aa7.99□□□□□ -1.13
RFX3-202ENST00000358730 ZNF619Q8N2I2 560 aa7.99□□□□□ -1.13
RFX3-202ENST00000358730 TMEM99Q8N816 258 aa7.99□□□□□ -1.13
RFX3-202ENST00000358730 OR10H4Q8NGA5 316 aa7.99□□□□□ -1.13
RFX3-202ENST00000358730 NT5CQ8TCD5 201 aa7.99□□□□□ -1.13
RFX3-202ENST00000358730 HERVK_113Q902F9 699 aa7.99□□□□□ -1.13
RFX3-202ENST00000358730 RIPOR3Q96MK2 946 aa7.99□□□□□ -1.13
RFX3-202ENST00000358730 SERINC2Q96SA4 455 aa7.99□□□□□ -1.13
RFX3-202ENST00000358730 PRSS27Q9BQR3 290 aa7.99□□□□□ -1.13
RFX3-202ENST00000358730 JAM3Q9BX67 310 aa7.99□□□□□ -1.13
RFX3-202ENST00000358730 ATP13A2Q9NQ11 1180 aa7.99□□□□□ -1.13
RFX3-202ENST00000358730 C20orf141Q9NUB4 165 aa7.99□□□□□ -1.13
RFX3-202ENST00000358730 SIDT1Q9NXL6 827 aaKnown RBP7.99□□□□□ -1.13
RFX3-202ENST00000358730 KCMF1Q9P0J7 381 aa7.99□□□□□ -1.13
RFX3-202ENST00000358730 NLKQ9UBE8 527 aa7.99□□□□□ -1.13
RFX3-202ENST00000358730 KLF15Q9UIH9 416 aa7.99□□□□□ -1.13
RFX3-202ENST00000358730 XIRP2A4UGR9 3374 aa7.99□□□□□ -1.13
RFX3-202ENST00000358730 FAM240BA0A1B0GVZ2 78 aa7.98□□□□□ -1.13
RFX3-202ENST00000358730 POM121BA6NF01 834 aa7.98□□□□□ -1.13
RFX3-202ENST00000358730 LRRC72A6NJI9 287 aa7.98□□□□□ -1.13
RFX3-202ENST00000358730 GRXCR1A8MXD5 290 aa7.98□□□□□ -1.13
RFX3-202ENST00000358730 PEX12O00623 359 aa7.98□□□□□ -1.13
RFX3-202ENST00000358730 DNAJB6O75190 326 aa7.98□□□□□ -1.13
RFX3-202ENST00000358730 GAAP10253 952 aa7.98□□□□□ -1.13
RFX3-202ENST00000358730 CHRNB1P11230 501 aa7.98□□□□□ -1.13
RFX3-202ENST00000358730 CPMP14384 443 aa7.98□□□□□ -1.13
RFX3-202ENST00000358730 MAKP20794 623 aa7.98□□□□□ -1.13
RFX3-202ENST00000358730 GDI1P31150 447 aa7.98□□□□□ -1.13
RFX3-202ENST00000358730 TLX1P31314 330 aaPredicted RBP7.98□□□□□ -1.13
RFX3-202ENST00000358730 FXYD6P3P58550 94 aa7.98□□□□□ -1.13
RFX3-202ENST00000358730 RPS7P62081 194 aaKnown RBP7.98□□□□□ -1.13
RFX3-202ENST00000358730 RUNX2Q13950 521 aa7.98□□□□□ -1.13
RFX3-202ENST00000358730 DCST2Q5T1A1 773 aa7.98□□□□□ -1.13
RFX3-202ENST00000358730 IDNKQ5T6J7 187 aa7.98□□□□□ -1.13
RFX3-202ENST00000358730 COX18Q8N8Q8 333 aa7.98□□□□□ -1.13
RFX3-202ENST00000358730 OR10G6Q8NH81 332 aa7.98□□□□□ -1.13
RFX3-202ENST00000358730 TMEM239Q8WW34 195 aa7.98□□□□□ -1.13
RFX3-202ENST00000358730 ARSGQ96EG1 525 aa7.98□□□□□ -1.13
RFX3-202ENST00000358730 RNF170Q96K19 258 aa7.98□□□□□ -1.13
RFX3-202ENST00000358730 TMEM43Q9BTV4 400 aa7.98□□□□□ -1.13
RFX3-202ENST00000358730 HCAR1Q9BXC0 346 aa7.98□□□□□ -1.13
RFX3-202ENST00000358730 ZNF350Q9GZX5 532 aa7.98□□□□□ -1.13
RFX3-202ENST00000358730 TRIM36Q9NQ86 728 aa7.98□□□□□ -1.13
RFX3-202ENST00000358730 TMEM74BQ9NUR3 256 aa7.98□□□□□ -1.13
RFX3-202ENST00000358730 DAPP1Q9UN19 280 aa7.98□□□□□ -1.13
RFX3-202ENST00000358730 PCDHGB7Q9Y5F8 929 aa7.98□□□□□ -1.13
RFX3-202ENST00000358730 NOX1Q9Y5S8 564 aa7.98□□□□□ -1.13
RFX3-202ENST00000358730 RANBP2P49792 3224 aaKnown RBP7.98□□□□□ -1.13
RFX3-202ENST00000358730 F5P12259 2224 aa7.98□□□□□ -1.13
RFX3-202ENST00000358730 DAPL1A0PJW8 107 aa7.98□□□□□ -1.13
RFX3-202ENST00000358730 J3QRE1 110 aa7.98□□□□□ -1.13
RFX3-202ENST00000358730 BHLHE40O14503 412 aa7.98□□□□□ -1.13
RFX3-202ENST00000358730 HRO43593 1189 aa7.98□□□□□ -1.13
RFX3-202ENST00000358730 SLC19A2O60779 497 aa7.98□□□□□ -1.13
RFX3-202ENST00000358730 CTSVO60911 334 aa7.98□□□□□ -1.13
RFX3-202ENST00000358730 LDB3O75112 727 aa7.98□□□□□ -1.13
RFX3-202ENST00000358730 SAGP10523 405 aaPredicted RBP7.98□□□□□ -1.13
RFX3-202ENST00000358730 NDUFS1P28331 727 aa7.98□□□□□ -1.13
RFX3-202ENST00000358730 ACTR1BP42025 376 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms