RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 OR2L13Q8N349 312 aa13.3□□□□□ -0.28
NIPAL3-203ENST00000358028 CLIP4Q8N3C7 705 aa13.3□□□□□ -0.28
NIPAL3-203ENST00000358028 SLC16A11Q8NCK7 471 aa13.3□□□□□ -0.28
NIPAL3-203ENST00000358028 PATE1Q8WXA2 126 aa13.3□□□□□ -0.28
NIPAL3-203ENST00000358028 KCNS3Q9BQ31 491 aa13.3□□□□□ -0.28
NIPAL3-203ENST00000358028 MED18Q9BUE0 208 aa13.3□□□□□ -0.28
NIPAL3-203ENST00000358028 LYRM4Q9HD34 91 aa13.3□□□□□ -0.28
NIPAL3-203ENST00000358028 TMEM9BQ9NQ34 198 aa13.3□□□□□ -0.28
NIPAL3-203ENST00000358028 POT1Q9NUX5 634 aa13.3□□□□□ -0.28
NIPAL3-203ENST00000358028 NPAP1Q9NZP6 1156 aa13.3□□□□□ -0.28
NIPAL3-203ENST00000358028 PTGFRNQ9P2B2 879 aa13.3□□□□□ -0.28
NIPAL3-203ENST00000358028 ZNF443Q9Y2A4 671 aaPredicted RBP13.3□□□□□ -0.28
NIPAL3-203ENST00000358028 DCDC2BA2VCK2 349 aa13.29□□□□□ -0.28
NIPAL3-203ENST00000358028 FAM221BA6H8Z2 402 aa13.29□□□□□ -0.28
NIPAL3-203ENST00000358028 C4orf47A7E2U8 309 aa13.29□□□□□ -0.28
NIPAL3-203ENST00000358028 C2orf74A8MZ97 194 aa13.29□□□□□ -0.28
NIPAL3-203ENST00000358028 H0YGG7 62 aa13.29□□□□□ -0.28
NIPAL3-203ENST00000358028 CTDSP2O14595 271 aa13.29□□□□□ -0.28
NIPAL3-203ENST00000358028 FCMRO60667 390 aa13.29□□□□□ -0.28
NIPAL3-203ENST00000358028 UBXN7O94888 489 aa13.29□□□□□ -0.28
NIPAL3-203ENST00000358028 RABIFP47224 123 aa13.29□□□□□ -0.28
NIPAL3-203ENST00000358028 AVPR1BP47901 424 aa13.29□□□□□ -0.28
NIPAL3-203ENST00000358028 WNT4P56705 351 aa13.29□□□□□ -0.28
NIPAL3-203ENST00000358028 ARF3P61204 181 aaPredicted RBP13.29□□□□□ -0.28
NIPAL3-203ENST00000358028 UBE2IP63279 158 aaKnown RBP13.29□□□□□ -0.28
NIPAL3-203ENST00000358028 SELENBP1Q13228 472 aa13.29□□□□□ -0.28
NIPAL3-203ENST00000358028 SNAPC1Q16533 368 aa13.29□□□□□ -0.28
NIPAL3-203ENST00000358028 ARHGAP11BQ3KRB8 267 aa13.29□□□□□ -0.28
NIPAL3-203ENST00000358028 MINDY4Q4G0A6 757 aa13.29□□□□□ -0.28
NIPAL3-203ENST00000358028 GPBAR1Q8TDU6 330 aa13.29□□□□□ -0.28
NIPAL3-203ENST00000358028 SLC9A6Q92581 669 aa13.29□□□□□ -0.28
NIPAL3-203ENST00000358028 RSC1A1Q92681 617 aa13.29□□□□□ -0.28
NIPAL3-203ENST00000358028 RERGQ96A58 199 aaPredicted RBP13.29□□□□□ -0.28
NIPAL3-203ENST00000358028 KLHDC7BQ96G42 594 aa13.29□□□□□ -0.28
NIPAL3-203ENST00000358028 SDHCQ99643 169 aaPredicted RBP13.29□□□□□ -0.28
NIPAL3-203ENST00000358028 TEX12Q9BXU0 123 aa13.29□□□□□ -0.28
NIPAL3-203ENST00000358028 EGLN3Q9H6Z9 239 aa13.29□□□□□ -0.28
NIPAL3-203ENST00000358028 GAREM1Q9H706 876 aa13.29□□□□□ -0.28
NIPAL3-203ENST00000358028 CACYBPQ9HB71 228 aaKnown RBP13.29□□□□□ -0.28
NIPAL3-203ENST00000358028 GPR27Q9NS67 375 aa13.29□□□□□ -0.28
NIPAL3-203ENST00000358028 EVA1BQ9NVM1 165 aa13.29□□□□□ -0.28
NIPAL3-203ENST00000358028 CPNE7Q9UBL6 633 aa13.29□□□□□ -0.28
NIPAL3-203ENST00000358028 MRPS2Q9Y399 296 aaKnown RBP13.29□□□□□ -0.28
NIPAL3-203ENST00000358028 ENTPD2Q9Y5L3 495 aa13.29□□□□□ -0.28
NIPAL3-203ENST00000358028 A0A0J9YY10 115 aa13.28□□□□□ -0.28
NIPAL3-203ENST00000358028 ZNF860A6NHJ4 632 aa13.28□□□□□ -0.28
NIPAL3-203ENST00000358028 KDM4EB2RXH2 506 aaPredicted RBP13.28□□□□□ -0.28
NIPAL3-203ENST00000358028 AP3D1O14617 1153 aa13.28□□□□□ -0.28
NIPAL3-203ENST00000358028 PVRP15151 417 aa13.28□□□□□ -0.28
NIPAL3-203ENST00000358028 TRHRP34981 398 aaPredicted RBP13.28□□□□□ -0.28
NIPAL3-203ENST00000358028 LSSP48449 732 aa13.28□□□□□ -0.28
NIPAL3-203ENST00000358028 GAS1P54826 345 aa13.28□□□□□ -0.28
NIPAL3-203ENST00000358028 RGS8P57771 180 aaPredicted RBP13.28□□□□□ -0.28
NIPAL3-203ENST00000358028 TPBGQ13641 420 aa13.28□□□□□ -0.28
NIPAL3-203ENST00000358028 ZNF628Q5EBL2 1059 aa13.28□□□□□ -0.28
NIPAL3-203ENST00000358028 FHL5Q5TD97 284 aa13.28□□□□□ -0.28
NIPAL3-203ENST00000358028 DESI1Q6ICB0 168 aa13.28□□□□□ -0.28
NIPAL3-203ENST00000358028 TYW3Q6IPR3 259 aaKnown RBP13.28□□□□□ -0.28
NIPAL3-203ENST00000358028 CCBE1Q6UXH8 406 aaPredicted RBP13.28□□□□□ -0.28
NIPAL3-203ENST00000358028 TMPRSS11AQ6ZMR5 421 aa13.28□□□□□ -0.28
NIPAL3-203ENST00000358028 ZNF730Q6ZMV8 503 aa13.28□□□□□ -0.28
NIPAL3-203ENST00000358028 PLEKHM3Q6ZWE6 761 aa13.28□□□□□ -0.28
NIPAL3-203ENST00000358028 RNF44Q7L0R7 432 aa13.28□□□□□ -0.28
NIPAL3-203ENST00000358028 GDPD3Q7L5L3 318 aa13.28□□□□□ -0.28
NIPAL3-203ENST00000358028 LAPTM4BQ86VI4 370 aa13.28□□□□□ -0.28
NIPAL3-203ENST00000358028 MEX3DQ86XN8 651 aaKnown RBP13.28□□□□□ -0.28
NIPAL3-203ENST00000358028 CACTIN-AS1Q8N1I8 211 aa13.28□□□□□ -0.28
NIPAL3-203ENST00000358028 BAHD1Q8TBE0 780 aaPredicted RBP13.28□□□□□ -0.28
NIPAL3-203ENST00000358028 PIGXQ8TBF5 258 aa13.28□□□□□ -0.28
NIPAL3-203ENST00000358028 SLC25A46Q96AG3 418 aa13.28□□□□□ -0.28
NIPAL3-203ENST00000358028 GSDMCQ9BYG8 508 aa13.28□□□□□ -0.28
NIPAL3-203ENST00000358028 BARHL1Q9BZE3 327 aa13.28□□□□□ -0.28
NIPAL3-203ENST00000358028 PLA2G12AQ9BZM1 189 aa13.28□□□□□ -0.28
NIPAL3-203ENST00000358028 TCEAL2Q9H3H9 227 aaPredicted RBP13.28□□□□□ -0.28
NIPAL3-203ENST00000358028 MTHFD2LQ9H903 347 aaPredicted RBP13.28□□□□□ -0.28
NIPAL3-203ENST00000358028 MED17Q9NVC6 651 aa13.28□□□□□ -0.28
NIPAL3-203ENST00000358028 GRIP1Q9Y3R0 1128 aa13.28□□□□□ -0.28
NIPAL3-203ENST00000358028 TM4SF5O14894 197 aa13.27□□□□□ -0.28
NIPAL3-203ENST00000358028 CER1O95813 267 aa13.27□□□□□ -0.28
NIPAL3-203ENST00000358028 SPNP16150 400 aa13.27□□□□□ -0.28
NIPAL3-203ENST00000358028 SOX18P35713 384 aa13.27□□□□□ -0.28
NIPAL3-203ENST00000358028 ETV5P41161 510 aa13.27□□□□□ -0.28
NIPAL3-203ENST00000358028 STAT5AP42229 794 aa13.27□□□□□ -0.28
NIPAL3-203ENST00000358028 ETV1P50549 477 aa13.27□□□□□ -0.28
NIPAL3-203ENST00000358028 TPTEP56180 551 aa13.27□□□□□ -0.28
NIPAL3-203ENST00000358028 PSPHP78330 225 aa13.27□□□□□ -0.28
NIPAL3-203ENST00000358028 COL9A2Q14055 689 aaPredicted RBP13.27□□□□□ -0.28
NIPAL3-203ENST00000358028 LARS2Q15031 903 aaKnown RBP13.27□□□□□ -0.28
NIPAL3-203ENST00000358028 DUSP5Q16690 384 aa13.27□□□□□ -0.28
NIPAL3-203ENST00000358028 DECR1Q16698 335 aa13.27□□□□□ -0.28
NIPAL3-203ENST00000358028 ZNF836Q6ZNA1 936 aa13.27□□□□□ -0.28
NIPAL3-203ENST00000358028 PEX5LQ8IYB4 626 aa13.27□□□□□ -0.28
NIPAL3-203ENST00000358028 FAM181AQ8N9Y4 354 aa13.27□□□□□ -0.28
NIPAL3-203ENST00000358028 SIMC1Q8NDZ2 872 aa13.27□□□□□ -0.28
NIPAL3-203ENST00000358028 OR8D4Q8NGM9 314 aa13.27□□□□□ -0.28
NIPAL3-203ENST00000358028 OSTF1Q92882 214 aa13.27□□□□□ -0.28
NIPAL3-203ENST00000358028 RFKQ969G6 155 aa13.27□□□□□ -0.28
NIPAL3-203ENST00000358028 FAM46AQ96IP4 442 aaKnown RBP13.27□□□□□ -0.28
NIPAL3-203ENST00000358028 MCHR1Q99705 422 aa13.27□□□□□ -0.28
NIPAL3-203ENST00000358028 SAP130Q9H0E3 1048 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms