RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 MRPL2Q5T653 305 aaKnown RBP23.21■■□□□ 1.31
SSBP3-202ENST00000357475 OR5M10Q6IEU7 315 aa23.21■■□□□ 1.31
SSBP3-202ENST00000357475 LCN8Q6JVE9 175 aa23.21■■□□□ 1.31
SSBP3-202ENST00000357475 SECISBP2Q96T21 854 aaKnown RBP23.21■■□□□ 1.31
SSBP3-202ENST00000357475 ARHGAP9Q9BRR9 750 aa23.21■■□□□ 1.31
SSBP3-202ENST00000357475 ANGPTL4Q9BY76 406 aa23.21■■□□□ 1.31
SSBP3-202ENST00000357475 SACM1LQ9NTJ5 587 aa23.21■■□□□ 1.31
SSBP3-202ENST00000357475 RYDENQ9NUL5 291 aaKnown RBP23.21■■□□□ 1.31
SSBP3-202ENST00000357475 NCKAP5O14513 1909 aa23.21■■□□□ 1.31
SSBP3-202ENST00000357475 GMFGO60234 142 aa23.2■■□□□ 1.3
SSBP3-202ENST00000357475 SERPINB7O75635 380 aa23.2■■□□□ 1.3
SSBP3-202ENST00000357475 P04436 131 aa23.2■■□□□ 1.3
SSBP3-202ENST00000357475 THBS1P07996 1170 aa23.2■■□□□ 1.3
SSBP3-202ENST00000357475 SP1P08047 785 aa23.2■■□□□ 1.3
SSBP3-202ENST00000357475 TNFRSF1BP20333 461 aa23.2■■□□□ 1.3
SSBP3-202ENST00000357475 KCNJ10P78508 379 aa23.2■■□□□ 1.3
SSBP3-202ENST00000357475 LSRQ86X29 649 aaPredicted RBP23.2■■□□□ 1.3
SSBP3-202ENST00000357475 RBMXL3Q8N7X1 1067 aaKnown RBP23.2■■□□□ 1.3
SSBP3-202ENST00000357475 EXD3Q8N9H8 876 aa23.2■■□□□ 1.3
SSBP3-202ENST00000357475 ZNF527Q8NB42 609 aa23.2■■□□□ 1.3
SSBP3-202ENST00000357475 PHOSPHO1Q8TCT1 267 aa23.2■■□□□ 1.3
SSBP3-202ENST00000357475 CNOT9Q92600 299 aaKnown RBP23.2■■□□□ 1.3
SSBP3-202ENST00000357475 PMM1Q92871 262 aa23.2■■□□□ 1.3
SSBP3-202ENST00000357475 NSMCE2Q96MF7 247 aa23.2■■□□□ 1.3
SSBP3-202ENST00000357475 MFRPQ9BY79 579 aa23.2■■□□□ 1.3
SSBP3-202ENST00000357475 TIMMDC1Q9NPL8 285 aa23.2■■□□□ 1.3
SSBP3-202ENST00000357475 CNIH4Q9P003 139 aa23.2■■□□□ 1.3
SSBP3-202ENST00000357475 A0A1W2PQD3 144 aa23.19■■□□□ 1.3
SSBP3-202ENST00000357475 FRS3O43559 492 aa23.19■■□□□ 1.3
SSBP3-202ENST00000357475 ZNF682O95780 498 aa23.19■■□□□ 1.3
SSBP3-202ENST00000357475 KCNJ5P48544 419 aa23.19■■□□□ 1.3
SSBP3-202ENST00000357475 LIN52Q52LA3 116 aa23.19■■□□□ 1.3
SSBP3-202ENST00000357475 SLC25A25Q6KCM7 469 aa23.19■■□□□ 1.3
SSBP3-202ENST00000357475 TMEM81Q6P7N7 255 aa23.19■■□□□ 1.3
SSBP3-202ENST00000357475 ENPP6Q6UWR7 440 aa23.19■■□□□ 1.3
SSBP3-202ENST00000357475 CBLL1Q75N03 491 aa23.19■■□□□ 1.3
SSBP3-202ENST00000357475 VTCN1Q7Z7D3 282 aa23.19■■□□□ 1.3
SSBP3-202ENST00000357475 ZADH2Q8N4Q0 377 aa23.19■■□□□ 1.3
SSBP3-202ENST00000357475 BHLHE22Q8NFJ8 381 aaPredicted RBP23.19■■□□□ 1.3
SSBP3-202ENST00000357475 SLC26A7Q8TE54 656 aa23.19■■□□□ 1.3
SSBP3-202ENST00000357475 DUSP19Q8WTR2 217 aa23.19■■□□□ 1.3
SSBP3-202ENST00000357475 SCMH1Q96GD3 660 aa23.19■■□□□ 1.3
SSBP3-202ENST00000357475 TPD52L3Q96J77 140 aa23.19■■□□□ 1.3
SSBP3-202ENST00000357475 DCAF13Q9NV06 445 aaKnown RBP23.19■■□□□ 1.3
SSBP3-202ENST00000357475 IFT52Q9Y366 437 aa23.19■■□□□ 1.3
SSBP3-202ENST00000357475 WIF1Q9Y5W5 379 aa23.19■■□□□ 1.3
SSBP3-202ENST00000357475 TCRBV5S2A0A599 114 aa23.18■■□□□ 1.3
SSBP3-202ENST00000357475 NDUFB5O43674 189 aa23.18■■□□□ 1.3
SSBP3-202ENST00000357475 NME2P1O60361 137 aa23.18■■□□□ 1.3
SSBP3-202ENST00000357475 ADAM11O75078 769 aa23.18■■□□□ 1.3
SSBP3-202ENST00000357475 GMNNO75496 209 aa23.18■■□□□ 1.3
SSBP3-202ENST00000357475 NME2P22392 152 aa23.18■■□□□ 1.3
SSBP3-202ENST00000357475 RPP38P78345 283 aaKnown RBP23.18■■□□□ 1.3
SSBP3-202ENST00000357475 TRAP1Q12931 704 aaKnown RBP23.18■■□□□ 1.3
SSBP3-202ENST00000357475 FLOT2Q14254 428 aa23.18■■□□□ 1.3
SSBP3-202ENST00000357475 LARS2Q15031 903 aaKnown RBP23.18■■□□□ 1.3
SSBP3-202ENST00000357475 ZNF766Q5HY98 468 aa23.18■■□□□ 1.3
SSBP3-202ENST00000357475 CBLN3Q6UW01 205 aa23.18■■□□□ 1.3
SSBP3-202ENST00000357475 ASB18Q6ZVZ8 466 aa23.18■■□□□ 1.3
SSBP3-202ENST00000357475 GALNTL5Q7Z4T8 443 aa23.18■■□□□ 1.3
SSBP3-202ENST00000357475 SULF2Q8IWU5 870 aa23.18■■□□□ 1.3
SSBP3-202ENST00000357475 SH3YL1Q96HL8 342 aaPredicted RBP23.18■■□□□ 1.3
SSBP3-202ENST00000357475 DOHHQ9BU89 302 aa23.18■■□□□ 1.3
SSBP3-202ENST00000357475 SPATA5L1Q9BVQ7 753 aa23.18■■□□□ 1.3
SSBP3-202ENST00000357475 MUC13Q9H3R2 512 aa23.18■■□□□ 1.3
SSBP3-202ENST00000357475 ST6GALNAC1Q9NSC7 600 aaPredicted RBP23.18■■□□□ 1.3
SSBP3-202ENST00000357475 CARD8Q9Y2G2 431 aa23.18■■□□□ 1.3
SSBP3-202ENST00000357475 CDHR4A6H8M9 788 aa23.18■■□□□ 1.3
SSBP3-202ENST00000357475 CDK2AP1O14519 115 aa23.18■■□□□ 1.3
SSBP3-202ENST00000357475 UBTFL6P0CB48 400 aaPredicted RBP23.18■■□□□ 1.3
SSBP3-202ENST00000357475 CD46P15529 392 aa23.18■■□□□ 1.3
SSBP3-202ENST00000357475 PRKAR1BP31321 381 aa23.18■■□□□ 1.3
SSBP3-202ENST00000357475 ZNF117Q03924 483 aa23.18■■□□□ 1.3
SSBP3-202ENST00000357475 C1orf146Q5VVC0 180 aa23.18■■□□□ 1.3
SSBP3-202ENST00000357475 SLC30A6Q6NXT4 461 aa23.18■■□□□ 1.3
SSBP3-202ENST00000357475 DHRS4L2Q6PKH6 230 aa23.18■■□□□ 1.3
SSBP3-202ENST00000357475 LACC1Q8IV20 430 aa23.18■■□□□ 1.3
SSBP3-202ENST00000357475 WDSUB1Q8N9V3 476 aa23.18■■□□□ 1.3
SSBP3-202ENST00000357475 OR4D11Q8NGI4 311 aa23.18■■□□□ 1.3
SSBP3-202ENST00000357475 PINK1Q9BXM7 581 aa23.18■■□□□ 1.3
SSBP3-202ENST00000357475 DNAJB12Q9NXW2 375 aaKnown RBP23.18■■□□□ 1.3
SSBP3-202ENST00000357475 ZNF232Q9UNY5 417 aa23.18■■□□□ 1.3
SSBP3-202ENST00000357475 ANKRD33BA6NCL7 494 aa23.17■■□□□ 1.3
SSBP3-202ENST00000357475 GNB5O14775 395 aa23.17■■□□□ 1.3
SSBP3-202ENST00000357475 PRKD3O94806 890 aa23.17■■□□□ 1.3
SSBP3-202ENST00000357475 CSTAP01040 98 aa23.17■■□□□ 1.3
SSBP3-202ENST00000357475 FESP07332 822 aa23.17■■□□□ 1.3
SSBP3-202ENST00000357475 CNR1P21554 472 aa23.17■■□□□ 1.3
SSBP3-202ENST00000357475 SELENOWP63302 87 aa23.17■■□□□ 1.3
SSBP3-202ENST00000357475 SNTA1Q13424 505 aa23.17■■□□□ 1.3
SSBP3-202ENST00000357475 RNF220Q5VTB9 566 aa23.17■■□□□ 1.3
SSBP3-202ENST00000357475 EIF3MQ7L2H7 374 aaKnown RBP23.17■■□□□ 1.3
SSBP3-202ENST00000357475 FAM71CQ8NEG0 241 aa23.17■■□□□ 1.3
SSBP3-202ENST00000357475 C9orf43Q8TAL5 461 aaPredicted RBP23.17■■□□□ 1.3
SSBP3-202ENST00000357475 TM9SF4Q92544 642 aa23.17■■□□□ 1.3
SSBP3-202ENST00000357475 ZNF524Q96C55 264 aa23.17■■□□□ 1.3
SSBP3-202ENST00000357475 C5orf34Q96MH7 638 aa23.17■■□□□ 1.3
SSBP3-202ENST00000357475 FRMD6Q96NE9 622 aa23.17■■□□□ 1.3
SSBP3-202ENST00000357475 TUBA8Q9NY65 449 aaPredicted RBP23.17■■□□□ 1.3
SSBP3-202ENST00000357475 M0R3H8 397 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms