RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 TP53P04637 393 aaPredicted RBP11.05□□□□□ -0.64
COL9A1-202ENST00000357250 ZNF16P17020 682 aaPredicted RBP11.05□□□□□ -0.64
COL9A1-202ENST00000357250 S100PP25815 95 aa11.05□□□□□ -0.64
COL9A1-202ENST00000357250 RGS6P49758 472 aa11.05□□□□□ -0.64
COL9A1-202ENST00000357250 MEF2DQ14814 521 aa11.05□□□□□ -0.64
COL9A1-202ENST00000357250 FAM205BPQ63HN1 556 aa11.05□□□□□ -0.64
COL9A1-202ENST00000357250 C5orf46Q6UWT4 87 aa11.05□□□□□ -0.64
COL9A1-202ENST00000357250 ZNF534Q76KX8 674 aa11.05□□□□□ -0.64
COL9A1-202ENST00000357250 HORMAD2Q8N7B1 307 aa11.05□□□□□ -0.64
COL9A1-202ENST00000357250 ZFP41Q8N8Y5 198 aa11.05□□□□□ -0.64
COL9A1-202ENST00000357250 OR5D16Q8NGK9 328 aa11.05□□□□□ -0.64
COL9A1-202ENST00000357250 OR9A2Q8NGT5 310 aa11.05□□□□□ -0.64
COL9A1-202ENST00000357250 CIDECQ96AQ7 238 aaPredicted RBP11.05□□□□□ -0.64
COL9A1-202ENST00000357250 CLSTN3Q9BQT9 956 aa11.05□□□□□ -0.64
COL9A1-202ENST00000357250 APMAPQ9HDC9 416 aa11.05□□□□□ -0.64
COL9A1-202ENST00000357250 GPR52Q9Y2T5 361 aa11.05□□□□□ -0.64
COL9A1-202ENST00000357250 CEPT1Q9Y6K0 416 aa11.05□□□□□ -0.64
COL9A1-202ENST00000357250 KIAA1551Q9HCM1 1747 aa11.05□□□□□ -0.64
COL9A1-202ENST00000357250 A0A0G2JMP0 313 aa11.05□□□□□ -0.64
COL9A1-202ENST00000357250 LAMTOR5O43504 91 aa11.05□□□□□ -0.64
COL9A1-202ENST00000357250 ZNF888P0CJ79 500 aaPredicted RBP11.05□□□□□ -0.64
COL9A1-202ENST00000357250 PTNP21246 168 aa11.05□□□□□ -0.64
COL9A1-202ENST00000357250 TLE3Q04726 772 aa11.05□□□□□ -0.64
COL9A1-202ENST00000357250 DCST2Q5T1A1 773 aa11.05□□□□□ -0.64
COL9A1-202ENST00000357250 CNIH2Q6PI25 160 aa11.05□□□□□ -0.64
COL9A1-202ENST00000357250 SLC43A2Q8N370 569 aa11.05□□□□□ -0.64
COL9A1-202ENST00000357250 DNAJC22Q8N4W6 341 aa11.05□□□□□ -0.64
COL9A1-202ENST00000357250 OR4M2Q8NGB6 313 aa11.05□□□□□ -0.64
COL9A1-202ENST00000357250 OR52E1Q8NGJ3 308 aa11.05□□□□□ -0.64
COL9A1-202ENST00000357250 CDC6Q99741 560 aa11.05□□□□□ -0.64
COL9A1-202ENST00000357250 ZNF442Q9H7R0 627 aa11.05□□□□□ -0.64
COL9A1-202ENST00000357250 TMEM30AQ9NV96 361 aa11.05□□□□□ -0.64
COL9A1-202ENST00000357250 KCNIP1Q9NZI2 227 aa11.05□□□□□ -0.64
COL9A1-202ENST00000357250 SLC6A14Q9UN76 642 aa11.05□□□□□ -0.64
COL9A1-202ENST00000357250 BCORQ6W2J9 1755 aa11.05□□□□□ -0.64
COL9A1-202ENST00000357250 ACP2P11117 423 aa11.05□□□□□ -0.64
COL9A1-202ENST00000357250 UGT2B7P16662 529 aa11.05□□□□□ -0.64
COL9A1-202ENST00000357250 CAMK2DQ13557 499 aa11.05□□□□□ -0.64
COL9A1-202ENST00000357250 IRF4Q15306 451 aa11.05□□□□□ -0.64
COL9A1-202ENST00000357250 RPS26P11Q5JNZ5 115 aaPredicted RBP11.05□□□□□ -0.64
COL9A1-202ENST00000357250 IQCF1Q8N6M8 205 aa11.05□□□□□ -0.64
COL9A1-202ENST00000357250 IL17RCQ8NAC3 791 aa11.05□□□□□ -0.64
COL9A1-202ENST00000357250 CD300LFQ8TDQ1 290 aa11.05□□□□□ -0.64
COL9A1-202ENST00000357250 JPH3Q8WXH2 748 aaPredicted RBP11.05□□□□□ -0.64
COL9A1-202ENST00000357250 BPIFA2Q96DR5 249 aa11.05□□□□□ -0.64
COL9A1-202ENST00000357250 UBE2J1Q9Y385 318 aaPredicted RBP11.05□□□□□ -0.64
COL9A1-202ENST00000357250 NUP205Q92621 2012 aa11.05□□□□□ -0.64
COL9A1-202ENST00000357250 TRAV18A0A075B6X5 111 aa11.04□□□□□ -0.64
COL9A1-202ENST00000357250 CIB4A0PJX0 185 aa11.04□□□□□ -0.64
COL9A1-202ENST00000357250 A8MV72 311 aaPredicted RBP11.04□□□□□ -0.64
COL9A1-202ENST00000357250 H3BSH0 61 aa11.04□□□□□ -0.64
COL9A1-202ENST00000357250 SCGB2A1O75556 95 aa11.04□□□□□ -0.64
COL9A1-202ENST00000357250 ALPLP05186 524 aa11.04□□□□□ -0.64
COL9A1-202ENST00000357250 HOXD9P28356 352 aaPredicted RBP11.04□□□□□ -0.64
COL9A1-202ENST00000357250 TNFRSF4P43489 277 aa11.04□□□□□ -0.64
COL9A1-202ENST00000357250 RGRP47804 291 aa11.04□□□□□ -0.64
COL9A1-202ENST00000357250 RGS19P49795 217 aa11.04□□□□□ -0.64
COL9A1-202ENST00000357250 RSU1Q15404 277 aa11.04□□□□□ -0.64
COL9A1-202ENST00000357250 PGGHGQ32M88 737 aa11.04□□□□□ -0.64
COL9A1-202ENST00000357250 TRIM46Q7Z4K8 759 aa11.04□□□□□ -0.64
COL9A1-202ENST00000357250 TMEM150AQ86TG1 271 aa11.04□□□□□ -0.64
COL9A1-202ENST00000357250 MRPL43Q8N983 215 aaKnown RBP11.04□□□□□ -0.64
COL9A1-202ENST00000357250 FAM3CQ92520 227 aa11.04□□□□□ -0.64
COL9A1-202ENST00000357250 RGCCQ9H4X1 137 aa11.04□□□□□ -0.64
COL9A1-202ENST00000357250 POT1Q9NUX5 634 aa11.04□□□□□ -0.64
COL9A1-202ENST00000357250 KLHL13Q9P2N7 655 aa11.04□□□□□ -0.64
COL9A1-202ENST00000357250 ZNF337Q9Y3M9 751 aa11.04□□□□□ -0.64
COL9A1-202ENST00000357250 RNF215Q9Y6U7 377 aa11.04□□□□□ -0.64
COL9A1-202ENST00000357250 XIRP1Q702N8 1843 aaKnown RBP11.04□□□□□ -0.64
COL9A1-202ENST00000357250 SRCAPQ6ZRS2 3230 aa11.04□□□□□ -0.64
COL9A1-202ENST00000357250 SRPX2O60687 465 aaPredicted RBP11.04□□□□□ -0.64
COL9A1-202ENST00000357250 GPR75O95800 540 aa11.04□□□□□ -0.64
COL9A1-202ENST00000357250 FNTBP49356 437 aa11.04□□□□□ -0.64
COL9A1-202ENST00000357250 PGFP49763 221 aa11.04□□□□□ -0.64
COL9A1-202ENST00000357250 YPEL5P62699 121 aa11.04□□□□□ -0.64
COL9A1-202ENST00000357250 EMX1Q04741 257 aaPredicted RBP11.04□□□□□ -0.64
COL9A1-202ENST00000357250 TSPAN31Q12999 210 aa11.04□□□□□ -0.64
COL9A1-202ENST00000357250 LINC00299Q6ZSB3 139 aa11.04□□□□□ -0.64
COL9A1-202ENST00000357250 RTN4RL1Q86UN2 441 aaPredicted RBP11.04□□□□□ -0.64
COL9A1-202ENST00000357250 LRRC28Q86X40 367 aaPredicted RBP11.04□□□□□ -0.64
COL9A1-202ENST00000357250 SLC46A2Q9BY10 475 aa11.04□□□□□ -0.64
COL9A1-202ENST00000357250 TMEM168Q9H0V1 697 aa11.04□□□□□ -0.64
COL9A1-202ENST00000357250 BABAM2Q9NXR7 383 aa11.04□□□□□ -0.64
COL9A1-202ENST00000357250 CACNG2Q9Y698 323 aa11.04□□□□□ -0.64
COL9A1-202ENST00000357250 LAMB1P07942 1786 aa11.04□□□□□ -0.64
COL9A1-202ENST00000357250 DOCK2Q92608 1830 aa11.04□□□□□ -0.64
COL9A1-202ENST00000357250 TMX2-CTNND1H3BSU7 103 aa11.04□□□□□ -0.64
COL9A1-202ENST00000357250 BPNT1O95861 308 aa11.04□□□□□ -0.64
COL9A1-202ENST00000357250 ALDOCP09972 364 aaKnown RBP11.04□□□□□ -0.64
COL9A1-202ENST00000357250 RAB40ALP0C0E4 278 aa11.04□□□□□ -0.64
COL9A1-202ENST00000357250 TNFRSF1BP20333 461 aa11.04□□□□□ -0.64
COL9A1-202ENST00000357250 MAN2A2P49641 1150 aa11.04□□□□□ -0.64
COL9A1-202ENST00000357250 CTSCP53634 463 aa11.04□□□□□ -0.64
COL9A1-202ENST00000357250 ZNF169Q14929 603 aaPredicted RBP11.04□□□□□ -0.64
COL9A1-202ENST00000357250 ANKRD54Q6NXT1 300 aa11.04□□□□□ -0.64
COL9A1-202ENST00000357250 PTRH1Q86Y79 214 aaKnown RBP11.04□□□□□ -0.64
COL9A1-202ENST00000357250 OR6Q1Q8NGQ2 317 aa11.04□□□□□ -0.64
COL9A1-202ENST00000357250 RAB40AQ8WXH6 277 aa11.04□□□□□ -0.64
COL9A1-202ENST00000357250 ASB17Q8WXJ9 295 aa11.04□□□□□ -0.64
COL9A1-202ENST00000357250 SLC22A12Q96S37 553 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms