RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 CPEB1Q9BZB8 566 aaKnown RBP7.71□□□□□ -1.17
CDC42SE1-201ENST00000357235 TDP1Q9NUW8 608 aa7.71□□□□□ -1.17
CDC42SE1-201ENST00000357235 MED9Q9NWA0 146 aa7.71□□□□□ -1.17
CDC42SE1-201ENST00000357235 HCFC1R1Q9NWW0 138 aa7.71□□□□□ -1.17
CDC42SE1-201ENST00000357235 NKIRAS2Q9NYR9 191 aa7.71□□□□□ -1.17
CDC42SE1-201ENST00000357235 NTNG1Q9Y2I2 539 aa7.71□□□□□ -1.17
CDC42SE1-201ENST00000357235 ZC3H12DA2A288 527 aaKnown RBP7.71□□□□□ -1.18
CDC42SE1-201ENST00000357235 PRAMEF27A3QJZ7 478 aa7.71□□□□□ -1.18
CDC42SE1-201ENST00000357235 KDM4BO94953 1096 aa7.71□□□□□ -1.18
CDC42SE1-201ENST00000357235 HTR3BO95264 441 aa7.71□□□□□ -1.18
CDC42SE1-201ENST00000357235 LATS1O95835 1130 aa7.71□□□□□ -1.18
CDC42SE1-201ENST00000357235 LGI1O95970 557 aa7.71□□□□□ -1.18
CDC42SE1-201ENST00000357235 HLA-DQB1P01920 261 aa7.71□□□□□ -1.18
CDC42SE1-201ENST00000357235 SOD2P04179 222 aa7.71□□□□□ -1.18
CDC42SE1-201ENST00000357235 HLA-DPB1P04440 258 aa7.71□□□□□ -1.18
CDC42SE1-201ENST00000357235 IFNA4P05014 189 aa7.71□□□□□ -1.18
CDC42SE1-201ENST00000357235 CTSLP07711 333 aa7.71□□□□□ -1.18
CDC42SE1-201ENST00000357235 HK1P19367 917 aa7.71□□□□□ -1.18
CDC42SE1-201ENST00000357235 RAB3BP20337 219 aa7.71□□□□□ -1.18
CDC42SE1-201ENST00000357235 C4BPBP20851 252 aa7.71□□□□□ -1.18
CDC42SE1-201ENST00000357235 SSR2P43308 183 aa7.71□□□□□ -1.18
CDC42SE1-201ENST00000357235 EVX1P49640 407 aa7.71□□□□□ -1.18
CDC42SE1-201ENST00000357235 ATP12AP54707 1039 aa7.71□□□□□ -1.18
CDC42SE1-201ENST00000357235 RAB40BQ12829 278 aa7.71□□□□□ -1.18
CDC42SE1-201ENST00000357235 TCEA2Q15560 299 aa7.71□□□□□ -1.18
CDC42SE1-201ENST00000357235 PAN3Q58A45 887 aaKnown RBP7.71□□□□□ -1.18
CDC42SE1-201ENST00000357235 MZT2AQ6P582 158 aa7.71□□□□□ -1.18
CDC42SE1-201ENST00000357235 BEND4Q6ZU67 534 aa7.71□□□□□ -1.18
CDC42SE1-201ENST00000357235 RAB11FIP2Q7L804 512 aa7.71□□□□□ -1.18
CDC42SE1-201ENST00000357235 CCDC116Q8IYX3 515 aa7.71□□□□□ -1.18
CDC42SE1-201ENST00000357235 TMEM163Q8TC26 289 aa7.71□□□□□ -1.18
CDC42SE1-201ENST00000357235 APOBEC4Q8WW27 367 aaKnown RBP7.71□□□□□ -1.18
CDC42SE1-201ENST00000357235 TM4SF18Q96CE8 201 aa7.71□□□□□ -1.18
CDC42SE1-201ENST00000357235 ZG16BQ96DA0 208 aa7.71□□□□□ -1.18
CDC42SE1-201ENST00000357235 HHIPL1Q96JK4 782 aa7.71□□□□□ -1.18
CDC42SE1-201ENST00000357235 ATF6BQ99941 703 aa7.71□□□□□ -1.18
CDC42SE1-201ENST00000357235 TMEM43Q9BTV4 400 aa7.71□□□□□ -1.18
CDC42SE1-201ENST00000357235 PPP1R3EQ9H7J1 279 aa7.71□□□□□ -1.18
CDC42SE1-201ENST00000357235 NEUROD4Q9HD90 331 aa7.71□□□□□ -1.18
CDC42SE1-201ENST00000357235 ZDHHC4Q9NPG8 344 aa7.71□□□□□ -1.18
CDC42SE1-201ENST00000357235 PRDM9Q9NQV7 894 aa7.71□□□□□ -1.18
CDC42SE1-201ENST00000357235 ZSCAN32Q9NX65 697 aa7.71□□□□□ -1.18
CDC42SE1-201ENST00000357235 TESQ9UGI8 421 aaKnown RBP7.71□□□□□ -1.18
CDC42SE1-201ENST00000357235 KLF15Q9UIH9 416 aa7.71□□□□□ -1.18
CDC42SE1-201ENST00000357235 A0A087WUU8 490 aa7.7□□□□□ -1.18
CDC42SE1-201ENST00000357235 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.7□□□□□ -1.18
CDC42SE1-201ENST00000357235 TTLL8A6PVC2 850 aa7.7□□□□□ -1.18
CDC42SE1-201ENST00000357235 MPTX1A8MV57 137 aa7.7□□□□□ -1.18
CDC42SE1-201ENST00000357235 CCL16O15467 120 aa7.7□□□□□ -1.18
CDC42SE1-201ENST00000357235 AKAP8O43823 692 aaKnown RBP7.7□□□□□ -1.18
CDC42SE1-201ENST00000357235 TMPRSS11DO60235 418 aa7.7□□□□□ -1.18
CDC42SE1-201ENST00000357235 IRS1P35568 1242 aa7.7□□□□□ -1.18
CDC42SE1-201ENST00000357235 VSX2P58304 361 aaPredicted RBP7.7□□□□□ -1.18
CDC42SE1-201ENST00000357235 C3orf38Q5JPI3 329 aa7.7□□□□□ -1.18
CDC42SE1-201ENST00000357235 LY6G5CQ5SRR4 150 aa7.7□□□□□ -1.18
CDC42SE1-201ENST00000357235 KHDRBS2Q5VWX1 349 aaKnown RBP7.7□□□□□ -1.18
CDC42SE1-201ENST00000357235 C3P1Q6ZMU1 363 aa7.7□□□□□ -1.18
CDC42SE1-201ENST00000357235 PRICKLE2Q7Z3G6 844 aa7.7□□□□□ -1.18
CDC42SE1-201ENST00000357235 PAQR7Q86WK9 346 aa7.7□□□□□ -1.18
CDC42SE1-201ENST00000357235 TBC1D19Q8N5T2 526 aa7.7□□□□□ -1.18
CDC42SE1-201ENST00000357235 BVESQ8NE79 360 aa7.7□□□□□ -1.18
CDC42SE1-201ENST00000357235 OR1M1Q8NGA1 313 aa7.7□□□□□ -1.18
CDC42SE1-201ENST00000357235 ARSGQ96EG1 525 aa7.7□□□□□ -1.18
CDC42SE1-201ENST00000357235 MRPL48Q96GC5 212 aaKnown RBP7.7□□□□□ -1.18
CDC42SE1-201ENST00000357235 GAL3ST1Q99999 423 aa7.7□□□□□ -1.18
CDC42SE1-201ENST00000357235 MCOLN1Q9GZU1 580 aa7.7□□□□□ -1.18
CDC42SE1-201ENST00000357235 DDX31Q9H8H2 851 aaKnown RBP7.7□□□□□ -1.18
CDC42SE1-201ENST00000357235 ISG20L2Q9H9L3 353 aaKnown RBP7.7□□□□□ -1.18
CDC42SE1-201ENST00000357235 A4GALTQ9NPC4 353 aa7.7□□□□□ -1.18
CDC42SE1-201ENST00000357235 NIT2Q9NQR4 276 aa7.7□□□□□ -1.18
CDC42SE1-201ENST00000357235 ENAMQ9NRM1 1142 aa7.7□□□□□ -1.18
CDC42SE1-201ENST00000357235 GPN3Q9UHW5 284 aaPredicted RBP7.7□□□□□ -1.18
CDC42SE1-201ENST00000357235 PPIL1Q9Y3C6 166 aa7.7□□□□□ -1.18
CDC42SE1-201ENST00000357235 A0A1W2PRQ8 180 aa7.7□□□□□ -1.18
CDC42SE1-201ENST00000357235 WRBO00258 174 aa7.7□□□□□ -1.18
CDC42SE1-201ENST00000357235 SOD1P00441 154 aa7.7□□□□□ -1.18
CDC42SE1-201ENST00000357235 LPLP06858 475 aa7.7□□□□□ -1.18
CDC42SE1-201ENST00000357235 FGF2P09038 288 aa7.7□□□□□ -1.18
CDC42SE1-201ENST00000357235 CXCL3P19876 107 aa7.7□□□□□ -1.18
CDC42SE1-201ENST00000357235 PAICSP22234 425 aaKnown RBP7.7□□□□□ -1.18
CDC42SE1-201ENST00000357235 S100PP25815 95 aa7.7□□□□□ -1.18
CDC42SE1-201ENST00000357235 CST5P28325 142 aaPredicted RBP7.7□□□□□ -1.18
CDC42SE1-201ENST00000357235 AHRP35869 848 aa7.7□□□□□ -1.18
CDC42SE1-201ENST00000357235 AGFG1P52594 562 aaKnown RBP7.7□□□□□ -1.18
CDC42SE1-201ENST00000357235 DCDC1P59894 354 aa7.7□□□□□ -1.18
CDC42SE1-201ENST00000357235 CAMK2DQ13557 499 aa7.7□□□□□ -1.18
CDC42SE1-201ENST00000357235 TPBGQ13641 420 aa7.7□□□□□ -1.18
CDC42SE1-201ENST00000357235 GPR176Q14439 515 aa7.7□□□□□ -1.18
CDC42SE1-201ENST00000357235 TMEM215Q68D42 235 aa7.7□□□□□ -1.18
CDC42SE1-201ENST00000357235 ARL9Q6T311 187 aa7.7□□□□□ -1.18
CDC42SE1-201ENST00000357235 NLRC3Q7RTR2 1065 aa7.7□□□□□ -1.18
CDC42SE1-201ENST00000357235 SLC16A13Q7RTY0 426 aa7.7□□□□□ -1.18
CDC42SE1-201ENST00000357235 PIAS4Q8N2W9 510 aaPredicted RBP7.7□□□□□ -1.18
CDC42SE1-201ENST00000357235 FTMTQ8N4E7 242 aa7.7□□□□□ -1.18
CDC42SE1-201ENST00000357235 ARL6IP6Q8N6S5 226 aa7.7□□□□□ -1.18
CDC42SE1-201ENST00000357235 COQ8AQ8NI60 647 aa7.7□□□□□ -1.18
CDC42SE1-201ENST00000357235 SMAP2Q8WU79 429 aaPredicted RBP7.7□□□□□ -1.18
CDC42SE1-201ENST00000357235 SFT2D1Q8WV19 159 aa7.7□□□□□ -1.18
CDC42SE1-201ENST00000357235 HGDQ93099 445 aa7.7□□□□□ -1.18
CDC42SE1-201ENST00000357235 UBE2E3Q969T4 207 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms