RNA–Protein interactions for RNA: ENST00000356922.5

LIG4-201, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-201ENST00000356922 GCNT6Q5T4J0 391 aa3.67□□□□□ -1.82
LIG4-201ENST00000356922 REEP3Q6NUK4 255 aa3.67□□□□□ -1.82
LIG4-201ENST00000356922 BHLHB9Q6PI77 547 aa3.67□□□□□ -1.82
LIG4-201ENST00000356922 BNC2Q6ZN30 1099 aaPredicted RBP3.67□□□□□ -1.82
LIG4-201ENST00000356922 C16orf62Q7Z3J2 963 aa3.67□□□□□ -1.82
LIG4-201ENST00000356922 MICU2Q8IYU8 434 aa3.67□□□□□ -1.82
LIG4-201ENST00000356922 ASB15Q8WXK1 588 aa3.67□□□□□ -1.82
LIG4-201ENST00000356922 SLCO4A1Q96BD0 722 aa3.67□□□□□ -1.82
LIG4-201ENST00000356922 ART5Q96L15 291 aa3.67□□□□□ -1.82
LIG4-201ENST00000356922 ZNF354BQ96LW1 612 aa3.67□□□□□ -1.82
LIG4-201ENST00000356922 MRGBPQ9NV56 204 aa3.67□□□□□ -1.82
LIG4-201ENST00000356922 TUBA8Q9NY65 449 aaPredicted RBP3.67□□□□□ -1.82
LIG4-201ENST00000356922 SLC13A4Q9UKG4 626 aa3.67□□□□□ -1.82
LIG4-201ENST00000356922 TCRBV5S2A0A599 114 aa3.67□□□□□ -1.82
LIG4-201ENST00000356922 DUXAA6NLW8 204 aa3.67□□□□□ -1.82
LIG4-201ENST00000356922 M0R3H8 397 aa3.67□□□□□ -1.82
LIG4-201ENST00000356922 CXCR6O00574 342 aa3.67□□□□□ -1.82
LIG4-201ENST00000356922 GNB5O14775 395 aa3.67□□□□□ -1.82
LIG4-201ENST00000356922 FFAR1O14842 300 aa3.67□□□□□ -1.82
LIG4-201ENST00000356922 GSTA4O15217 222 aa3.67□□□□□ -1.82
LIG4-201ENST00000356922 ACOX3O15254 700 aa3.67□□□□□ -1.82
LIG4-201ENST00000356922 CYP7B1O75881 506 aa3.67□□□□□ -1.82
LIG4-201ENST00000356922 DNAJC8O75937 253 aaPredicted RBP3.67□□□□□ -1.82
LIG4-201ENST00000356922 ANGPTL1O95841 491 aa3.67□□□□□ -1.82
LIG4-201ENST00000356922 SP1P08047 785 aa3.67□□□□□ -1.82
LIG4-201ENST00000356922 ATP6V1C1P21283 382 aa3.67□□□□□ -1.82
LIG4-201ENST00000356922 TBXA2RP21731 343 aa3.67□□□□□ -1.82
LIG4-201ENST00000356922 RYKP34925 604 aa3.67□□□□□ -1.82
LIG4-201ENST00000356922 CASRP41180 1078 aa3.67□□□□□ -1.82
LIG4-201ENST00000356922 ACAA2P42765 397 aaKnown RBP3.67□□□□□ -1.82
LIG4-201ENST00000356922 KHKP50053 298 aa3.67□□□□□ -1.82
LIG4-201ENST00000356922 ZNF136P52737 540 aa3.67□□□□□ -1.82
LIG4-201ENST00000356922 NRG3P56975 720 aa3.67□□□□□ -1.82
LIG4-201ENST00000356922 KCNJ10P78508 379 aa3.67□□□□□ -1.82
LIG4-201ENST00000356922 ARG2P78540 354 aa3.67□□□□□ -1.82
LIG4-201ENST00000356922 ZNF117Q03924 483 aa3.67□□□□□ -1.82
LIG4-201ENST00000356922 TRIM25Q14258 630 aaKnown RBP3.67□□□□□ -1.82
LIG4-201ENST00000356922 DECR1Q16698 335 aa3.67□□□□□ -1.82
LIG4-201ENST00000356922 MRPL2Q5T653 305 aaKnown RBP3.67□□□□□ -1.82
LIG4-201ENST00000356922 ATAD3BQ5T9A4 648 aa3.67□□□□□ -1.82
LIG4-201ENST00000356922 JMJD6Q6NYC1 403 aaPredicted RBP3.67□□□□□ -1.82
LIG4-201ENST00000356922 ZNF836Q6ZNA1 936 aa3.67□□□□□ -1.82
LIG4-201ENST00000356922 LRRC74BQ6ZQY2 392 aa3.67□□□□□ -1.82
LIG4-201ENST00000356922 CCDC121Q6ZUS5 278 aa3.67□□□□□ -1.82
LIG4-201ENST00000356922 OR6T1Q8NGN1 323 aa3.67□□□□□ -1.82
LIG4-201ENST00000356922 OR52P1PQ8NH57 321 aa3.67□□□□□ -1.82
LIG4-201ENST00000356922 SPPL2AQ8TCT8 520 aa3.67□□□□□ -1.82
LIG4-201ENST00000356922 SLC26A7Q8TE54 656 aa3.67□□□□□ -1.82
LIG4-201ENST00000356922 JSRP1Q96MG2 331 aaPredicted RBP3.67□□□□□ -1.82
LIG4-201ENST00000356922 FRMD6Q96NE9 622 aa3.67□□□□□ -1.82
LIG4-201ENST00000356922 KCTD14Q9BQ13 255 aaPredicted RBP3.67□□□□□ -1.82
LIG4-201ENST00000356922 MTHFD2LQ9H903 347 aaPredicted RBP3.67□□□□□ -1.82
LIG4-201ENST00000356922 BCL2L10Q9HD36 194 aa3.67□□□□□ -1.82
LIG4-201ENST00000356922 HPF1Q9NWY4 346 aa3.67□□□□□ -1.82
LIG4-201ENST00000356922 GTF3C1Q12789 2109 aa3.67□□□□□ -1.82
LIG4-201ENST00000356922 KDM4EB2RXH2 506 aaPredicted RBP3.67□□□□□ -1.82
LIG4-201ENST00000356922 HS6ST1O60243 411 aa3.67□□□□□ -1.82
LIG4-201ENST00000356922 PDE9AO76083 593 aa3.67□□□□□ -1.82
LIG4-201ENST00000356922 PRKD3O94806 890 aa3.67□□□□□ -1.82
LIG4-201ENST00000356922 SERPINA1P01009 418 aa3.67□□□□□ -1.82
LIG4-201ENST00000356922 HTR2AP28223 471 aa3.67□□□□□ -1.82
LIG4-201ENST00000356922 HTR1EP28566 365 aa3.67□□□□□ -1.82
LIG4-201ENST00000356922 PCGF2P35227 344 aa3.67□□□□□ -1.82
LIG4-201ENST00000356922 ANXA11P50995 505 aaKnown RBP3.67□□□□□ -1.82
LIG4-201ENST00000356922 ATP12AP54707 1039 aa3.67□□□□□ -1.82
LIG4-201ENST00000356922 MLLT10P55197 1068 aa3.67□□□□□ -1.82
LIG4-201ENST00000356922 EEFSECP57772 596 aaKnown RBP3.67□□□□□ -1.82
LIG4-201ENST00000356922 DCAF7P61962 342 aa3.67□□□□□ -1.82
LIG4-201ENST00000356922 VLDLRP98155 873 aa3.67□□□□□ -1.82
LIG4-201ENST00000356922 HSF1Q00613 529 aa3.67□□□□□ -1.82
LIG4-201ENST00000356922 CCNIQ14094 377 aa3.67□□□□□ -1.82
LIG4-201ENST00000356922 ZNF141Q15928 474 aa3.67□□□□□ -1.82
LIG4-201ENST00000356922 LRRC23Q53EV4 343 aaPredicted RBP3.67□□□□□ -1.82
LIG4-201ENST00000356922 SLC22A10Q63ZE4 541 aa3.67□□□□□ -1.82
LIG4-201ENST00000356922 SLC6A19Q695T7 634 aa3.67□□□□□ -1.82
LIG4-201ENST00000356922 IGFL3Q6UXB1 125 aa3.67□□□□□ -1.82
LIG4-201ENST00000356922 Q6ZS92 163 aa3.67□□□□□ -1.82
LIG4-201ENST00000356922 ASB18Q6ZVZ8 466 aa3.67□□□□□ -1.82
LIG4-201ENST00000356922 P3H2Q8IVL5 708 aa3.67□□□□□ -1.82
LIG4-201ENST00000356922 C11orf65Q8NCR3 313 aa3.67□□□□□ -1.82
LIG4-201ENST00000356922 UTP23Q9BRU9 249 aaKnown RBP3.67□□□□□ -1.82
LIG4-201ENST00000356922 ANGPTL4Q9BY76 406 aa3.67□□□□□ -1.82
LIG4-201ENST00000356922 DENND2DQ9H6A0 471 aaPredicted RBP3.67□□□□□ -1.82
LIG4-201ENST00000356922 UBQLN4Q9NRR5 601 aa3.67□□□□□ -1.82
LIG4-201ENST00000356922 DNAJB12Q9NXW2 375 aaKnown RBP3.67□□□□□ -1.82
LIG4-201ENST00000356922 P2RX2Q9UBL9 471 aa3.67□□□□□ -1.82
LIG4-201ENST00000356922 ICAM5Q9UMF0 924 aa3.67□□□□□ -1.82
LIG4-201ENST00000356922 CFL2Q9Y281 166 aa3.67□□□□□ -1.82
LIG4-201ENST00000356922 SH3GLB1Q9Y371 365 aa3.67□□□□□ -1.82
LIG4-201ENST00000356922 PCDHGA9Q9Y5G4 932 aaKnown RBP3.67□□□□□ -1.82
LIG4-201ENST00000356922 SHANK1Q9Y566 2161 aa3.67□□□□□ -1.82
LIG4-201ENST00000356922 MPDZO75970 2070 aa3.67□□□□□ -1.82
LIG4-201ENST00000356922 KIAA1549Q9HCM3 1950 aa3.67□□□□□ -1.82
LIG4-201ENST00000356922 CDHR4A6H8M9 788 aa3.66□□□□□ -1.82
LIG4-201ENST00000356922 TMEM8BA6NDV4 472 aa3.66□□□□□ -1.82
LIG4-201ENST00000356922 FAM220BPB1ANY3 271 aa3.66□□□□□ -1.82
LIG4-201ENST00000356922 ALG1L2C9J202 215 aa3.66□□□□□ -1.82
LIG4-201ENST00000356922 ZIC3O60481 467 aa3.66□□□□□ -1.82
LIG4-201ENST00000356922 CDC40O60508 579 aaKnown RBP eCLIP3.66□□□□□ -1.82
LIG4-201ENST00000356922 ENTPD5O75356 428 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms