RNA–Protein interactions for RNA: ENST00000356141.8

NPAS3-202, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-202ENST00000356141 DUX1O43812 170 aa16.31■□□□□ 0.2
NPAS3-202ENST00000356141 DPM1O60762 260 aa16.31■□□□□ 0.2
NPAS3-202ENST00000356141 OXSR1O95747 527 aaPredicted RBP16.31■□□□□ 0.2
NPAS3-202ENST00000356141 NUDT1P36639 197 aa16.31■□□□□ 0.2
NPAS3-202ENST00000356141 SOX3P41225 446 aa16.31■□□□□ 0.2
NPAS3-202ENST00000356141 OR1Q1Q15612 314 aa16.31■□□□□ 0.2
NPAS3-202ENST00000356141 IGFN1Q86VF2 1251 aa16.31■□□□□ 0.2
NPAS3-202ENST00000356141 GPR135Q8IZ08 494 aa16.31■□□□□ 0.2
NPAS3-202ENST00000356141 SAMD14Q8IZD0 417 aaPredicted RBP16.31■□□□□ 0.2
NPAS3-202ENST00000356141 BBS1Q8NFJ9 593 aa16.31■□□□□ 0.2
NPAS3-202ENST00000356141 FKBP10Q96AY3 582 aa16.31■□□□□ 0.2
NPAS3-202ENST00000356141 TSSK6Q9BXA6 273 aa16.31■□□□□ 0.2
NPAS3-202ENST00000356141 OR10A5Q9H207 317 aa16.31■□□□□ 0.2
NPAS3-202ENST00000356141 ZBTB20Q9HC78 741 aaPredicted RBP16.31■□□□□ 0.2
NPAS3-202ENST00000356141 FGF21Q9NSA1 209 aa16.31■□□□□ 0.2
NPAS3-202ENST00000356141 CLN6Q9NWW5 311 aa16.31■□□□□ 0.2
NPAS3-202ENST00000356141 MKL2Q9ULH7 1088 aa16.31■□□□□ 0.2
NPAS3-202ENST00000356141 MRPS33Q9Y291 106 aaKnown RBP16.31■□□□□ 0.2
NPAS3-202ENST00000356141 MED12Q93074 2177 aa16.31■□□□□ 0.2
NPAS3-202ENST00000356141 FER1L5A0AVI2 2057 aa16.31■□□□□ 0.2
NPAS3-202ENST00000356141 LOC400499M0QZD8 3231 aa16.31■□□□□ 0.2
NPAS3-202ENST00000356141 ASNA1O43681 348 aa16.31■□□□□ 0.2
NPAS3-202ENST00000356141 SIGLEC6O43699 453 aa16.31■□□□□ 0.2
NPAS3-202ENST00000356141 ARRB1P49407 418 aaPredicted RBP16.31■□□□□ 0.2
NPAS3-202ENST00000356141 EEF1A1P68104 462 aaKnown RBP16.31■□□□□ 0.2
NPAS3-202ENST00000356141 ST3GAL3Q11203 375 aa16.31■□□□□ 0.2
NPAS3-202ENST00000356141 TRAM2Q15035 370 aa16.31■□□□□ 0.2
NPAS3-202ENST00000356141 TIGD6Q17RP2 521 aa16.31■□□□□ 0.2
NPAS3-202ENST00000356141 HLA-BQ31612 363 aa16.31■□□□□ 0.2
NPAS3-202ENST00000356141 TCEAL6Q6IPX3 200 aa16.31■□□□□ 0.2
NPAS3-202ENST00000356141 SLC36A4Q6YBV0 504 aa16.31■□□□□ 0.2
NPAS3-202ENST00000356141 ANKK1Q8NFD2 765 aa16.31■□□□□ 0.2
NPAS3-202ENST00000356141 DNASE2BQ8WZ79 361 aa16.31■□□□□ 0.2
NPAS3-202ENST00000356141 TCEAL3Q969E4 200 aa16.31■□□□□ 0.2
NPAS3-202ENST00000356141 SAMD8Q96LT4 415 aa16.31■□□□□ 0.2
NPAS3-202ENST00000356141 FUZQ9BT04 418 aa16.31■□□□□ 0.2
NPAS3-202ENST00000356141 TTTY10Q9BZA0 68 aa16.31■□□□□ 0.2
NPAS3-202ENST00000356141 CALML5Q9NZT1 146 aa16.31■□□□□ 0.2
NPAS3-202ENST00000356141 NSA2O95478 260 aaKnown RBP16.3■□□□□ 0.2
NPAS3-202ENST00000356141 EMP3P54852 163 aa16.3■□□□□ 0.2
NPAS3-202ENST00000356141 HSD11B2P80365 405 aa16.3■□□□□ 0.2
NPAS3-202ENST00000356141 ARHGAP40Q5TG30 622 aa16.3■□□□□ 0.2
NPAS3-202ENST00000356141 DEPDC4Q8N2C3 294 aa16.3■□□□□ 0.2
NPAS3-202ENST00000356141 SLC38A9Q8NBW4 561 aa16.3■□□□□ 0.2
NPAS3-202ENST00000356141 CTHRC1Q96CG8 243 aa16.3■□□□□ 0.2
NPAS3-202ENST00000356141 SMAD5Q99717 465 aaKnown RBP16.3■□□□□ 0.2
NPAS3-202ENST00000356141 SAP130Q9H0E3 1048 aa16.3■□□□□ 0.2
NPAS3-202ENST00000356141 GAREM1Q9H706 876 aa16.3■□□□□ 0.2
NPAS3-202ENST00000356141 KLK4Q9Y5K2 254 aa16.3■□□□□ 0.2
NPAS3-202ENST00000356141 CTNSO60931 367 aa16.3■□□□□ 0.2
NPAS3-202ENST00000356141 RFPL3O75679 317 aa16.3■□□□□ 0.2
NPAS3-202ENST00000356141 ADORA3P0DMS8 318 aa16.3■□□□□ 0.2
NPAS3-202ENST00000356141 SAGP10523 405 aaPredicted RBP16.3■□□□□ 0.2
NPAS3-202ENST00000356141 GIPRP48546 466 aa16.3■□□□□ 0.2
NPAS3-202ENST00000356141 GRM7Q14831 915 aa16.3■□□□□ 0.2
NPAS3-202ENST00000356141 ZNHIT3Q15649 155 aaPredicted RBP16.3■□□□□ 0.2
NPAS3-202ENST00000356141 ZNF574Q6ZN55 896 aaPredicted RBP16.3■□□□□ 0.2
NPAS3-202ENST00000356141 GJD3Q8N144 294 aa16.3■□□□□ 0.2
NPAS3-202ENST00000356141 ZNF675Q8TD23 568 aa16.3■□□□□ 0.2
NPAS3-202ENST00000356141 SENP5Q96HI0 755 aaPredicted RBP16.3■□□□□ 0.2
NPAS3-202ENST00000356141 CHCHD6Q9BRQ6 235 aa16.3■□□□□ 0.2
NPAS3-202ENST00000356141 OR51E2Q9H255 320 aa16.3■□□□□ 0.2
NPAS3-202ENST00000356141 APMAPQ9HDC9 416 aa16.3■□□□□ 0.2
NPAS3-202ENST00000356141 TBC1D23Q9NUY8 699 aa16.3■□□□□ 0.2
NPAS3-202ENST00000356141 CFAP47Q6ZTR5 3102 aa16.3■□□□□ 0.2
NPAS3-202ENST00000356141 TP53BP1Q12888 1972 aaPredicted RBP16.29■□□□□ 0.2
NPAS3-202ENST00000356141 M0R082 166 aa16.29■□□□□ 0.2
NPAS3-202ENST00000356141 KHNYNO15037 678 aaKnown RBP16.29■□□□□ 0.2
NPAS3-202ENST00000356141 B3GALNT1O75752 331 aa16.29■□□□□ 0.2
NPAS3-202ENST00000356141 BCL10O95999 233 aa16.29■□□□□ 0.2
NPAS3-202ENST00000356141 IFI30P13284 250 aa16.29■□□□□ 0.2
NPAS3-202ENST00000356141 ITIH1P19827 911 aa16.29■□□□□ 0.2
NPAS3-202ENST00000356141 GADD45AP24522 165 aa16.29■□□□□ 0.2
NPAS3-202ENST00000356141 PRKAR1BP31321 381 aa16.29■□□□□ 0.2
NPAS3-202ENST00000356141 SLC16A1P53985 500 aa16.29■□□□□ 0.2
NPAS3-202ENST00000356141 MADCAM1Q13477 382 aa16.29■□□□□ 0.2
NPAS3-202ENST00000356141 NSDHLQ15738 373 aa16.29■□□□□ 0.2
NPAS3-202ENST00000356141 PRSS48Q7RTY5 328 aa16.29■□□□□ 0.2
NPAS3-202ENST00000356141 ZFP41Q8N8Y5 198 aa16.29■□□□□ 0.2
NPAS3-202ENST00000356141 FNDC8Q8TC99 324 aa16.29■□□□□ 0.2
NPAS3-202ENST00000356141 ZNF566Q969W8 418 aa16.29■□□□□ 0.2
NPAS3-202ENST00000356141 FAIMQ9NVQ4 179 aa16.29■□□□□ 0.2
NPAS3-202ENST00000356141 DMXL1Q9Y485 3027 aa16.29■□□□□ 0.2
NPAS3-202ENST00000356141 CDK1P06493 297 aa16.29■□□□□ 0.2
NPAS3-202ENST00000356141 GLB1P16278 677 aa16.29■□□□□ 0.2
NPAS3-202ENST00000356141 MAKP20794 623 aa16.29■□□□□ 0.2
NPAS3-202ENST00000356141 ENDOUP21128 410 aaKnown RBP16.29■□□□□ 0.2
NPAS3-202ENST00000356141 TCEA1P23193 301 aaKnown RBP16.29■□□□□ 0.2
NPAS3-202ENST00000356141 SLC9A3P48764 834 aa16.29■□□□□ 0.2
NPAS3-202ENST00000356141 CTF1Q16619 201 aa16.29■□□□□ 0.2
NPAS3-202ENST00000356141 P2RY8Q86VZ1 359 aa16.29■□□□□ 0.2
NPAS3-202ENST00000356141 OR13C2Q8NGS9 318 aa16.29■□□□□ 0.2
NPAS3-202ENST00000356141 TEX47Q8TBZ9 253 aa16.29■□□□□ 0.2
NPAS3-202ENST00000356141 TMEM203Q969S6 136 aa16.29■□□□□ 0.2
NPAS3-202ENST00000356141 TBX5Q99593 518 aa16.29■□□□□ 0.2
NPAS3-202ENST00000356141 NDC1Q9BTX1 674 aa16.29■□□□□ 0.2
NPAS3-202ENST00000356141 DUSP15Q9H1R2 295 aaPredicted RBP16.29■□□□□ 0.2
NPAS3-202ENST00000356141 AKIRIN1Q9H9L7 192 aaPredicted RBP16.29■□□□□ 0.2
NPAS3-202ENST00000356141 C2orf72A6NCS6 295 aa16.28■□□□□ 0.2
NPAS3-202ENST00000356141 BRINP1O60477 761 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms