RNA–Protein interactions for RNA: ENST00000355841.6

PDLIM7-202, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-202ENST00000355841 DSPPQ9NZW4 1301 aa16.28■□□□□ 0.2
PDLIM7-202ENST00000355841 A0A1W2PQD3 144 aa16.28■□□□□ 0.2
PDLIM7-202ENST00000355841 SERINC4A6NH21 518 aa16.28■□□□□ 0.2
PDLIM7-202ENST00000355841 AGAP5A6NIR3 686 aa16.28■□□□□ 0.2
PDLIM7-202ENST00000355841 ACOT7O00154 380 aa16.28■□□□□ 0.2
PDLIM7-202ENST00000355841 NME4O00746 187 aa16.28■□□□□ 0.2
PDLIM7-202ENST00000355841 CDC40O60508 579 aaKnown RBP eCLIP16.28■□□□□ 0.2
PDLIM7-202ENST00000355841 TRAPPC6AO75865 159 aa16.28■□□□□ 0.2
PDLIM7-202ENST00000355841 UBOX5O94941 541 aa16.28■□□□□ 0.2
PDLIM7-202ENST00000355841 GUSBP08236 651 aa16.28■□□□□ 0.2
PDLIM7-202ENST00000355841 ELAVL4P26378 380 aaKnown RBP16.28■□□□□ 0.2
PDLIM7-202ENST00000355841 MXRA7P84157 204 aa16.28■□□□□ 0.2
PDLIM7-202ENST00000355841 C17orf67Q0P5P2 114 aa16.28■□□□□ 0.2
PDLIM7-202ENST00000355841 GNA13Q14344 377 aa16.28■□□□□ 0.2
PDLIM7-202ENST00000355841 ZNF630Q2M218 657 aaPredicted RBP16.28■□□□□ 0.2
PDLIM7-202ENST00000355841 HYAL4Q2M3T9 481 aa16.28■□□□□ 0.2
PDLIM7-202ENST00000355841 AP1ARQ63HQ0 302 aa16.28■□□□□ 0.2
PDLIM7-202ENST00000355841 REEP3Q6NUK4 255 aa16.28■□□□□ 0.2
PDLIM7-202ENST00000355841 CBLN3Q6UW01 205 aa16.28■□□□□ 0.2
PDLIM7-202ENST00000355841 NET1Q7Z628 596 aaPredicted RBP16.28■□□□□ 0.2
PDLIM7-202ENST00000355841 VRK2Q86Y07 508 aa16.28■□□□□ 0.2
PDLIM7-202ENST00000355841 C11orf65Q8NCR3 313 aa16.28■□□□□ 0.2
PDLIM7-202ENST00000355841 OR4K17Q8NGC6 315 aa16.28■□□□□ 0.2
PDLIM7-202ENST00000355841 UBQLN3Q9H347 655 aa16.28■□□□□ 0.2
PDLIM7-202ENST00000355841 SDHAF3Q9NRP4 125 aa16.28■□□□□ 0.2
PDLIM7-202ENST00000355841 LIPGQ9Y5X9 500 aa16.28■□□□□ 0.2
PDLIM7-202ENST00000355841 ZNF462Q96JM2 2506 aa16.28■□□□□ 0.2
PDLIM7-202ENST00000355841 NCKAP5O14513 1909 aa16.27■□□□□ 0.2
PDLIM7-202ENST00000355841 A0A0G2JPF8 293 aa16.27■□□□□ 0.2
PDLIM7-202ENST00000355841 B2RBV5 119 aa16.27■□□□□ 0.2
PDLIM7-202ENST00000355841 HNRNPCL2B2RXH8 293 aa16.27■□□□□ 0.2
PDLIM7-202ENST00000355841 HNRNPCL3B7ZW38 293 aa16.27■□□□□ 0.2
PDLIM7-202ENST00000355841 GTPBP1O00178 669 aaKnown RBP16.27■□□□□ 0.2
PDLIM7-202ENST00000355841 HCRTR2O43614 444 aa16.27■□□□□ 0.2
PDLIM7-202ENST00000355841 HNRNPCL1O60812 293 aaKnown RBP16.27■□□□□ 0.2
PDLIM7-202ENST00000355841 CYP7B1O75881 506 aa16.27■□□□□ 0.2
PDLIM7-202ENST00000355841 UBTFL6P0CB48 400 aaPredicted RBP16.27■□□□□ 0.2
PDLIM7-202ENST00000355841 HNRNPCL4P0DMR1 293 aa16.27■□□□□ 0.2
PDLIM7-202ENST00000355841 ZNF117Q03924 483 aa16.27■□□□□ 0.2
PDLIM7-202ENST00000355841 C19orf57Q0VDD7 668 aa16.27■□□□□ 0.2
PDLIM7-202ENST00000355841 FAM109AQ8N4B1 249 aa16.27■□□□□ 0.2
PDLIM7-202ENST00000355841 OR2M3Q8NG83 312 aa16.27■□□□□ 0.2
PDLIM7-202ENST00000355841 OR52P1PQ8NH57 321 aa16.27■□□□□ 0.2
PDLIM7-202ENST00000355841 SLX1AQ9BQ83 275 aa16.27■□□□□ 0.2
PDLIM7-202ENST00000355841 RSPO3Q9BXY4 272 aaPredicted RBP16.27■□□□□ 0.2
PDLIM7-202ENST00000355841 ZDHHC11Q9H8X9 412 aa16.27■□□□□ 0.2
PDLIM7-202ENST00000355841 BCL2L10Q9HD36 194 aa16.27■□□□□ 0.2
PDLIM7-202ENST00000355841 RLIMQ9NVW2 624 aa16.27■□□□□ 0.2
PDLIM7-202ENST00000355841 B4GALT7Q9UBV7 327 aa16.27■□□□□ 0.2
PDLIM7-202ENST00000355841 RELNP78509 3460 aa16.27■□□□□ 0.19
PDLIM7-202ENST00000355841 C15orf38-AP3S2A0A0A6YYH1 394 aa16.27■□□□□ 0.19
PDLIM7-202ENST00000355841 H3BNH8 94 aa16.27■□□□□ 0.19
PDLIM7-202ENST00000355841 PYCARD-AS1I3L0S3 204 aa16.27■□□□□ 0.19
PDLIM7-202ENST00000355841 IL7RP16871 459 aa16.27■□□□□ 0.19
PDLIM7-202ENST00000355841 RPS4Y1P22090 263 aaKnown RBP16.27■□□□□ 0.19
PDLIM7-202ENST00000355841 TDGF1P3P51864 188 aa16.27■□□□□ 0.19
PDLIM7-202ENST00000355841 FOXK1P85037 733 aa16.27■□□□□ 0.19
PDLIM7-202ENST00000355841 PLAURQ03405 335 aa16.27■□□□□ 0.19
PDLIM7-202ENST00000355841 LIPEQ05469 1076 aa16.27■□□□□ 0.19
PDLIM7-202ENST00000355841 FGFBP1Q14512 234 aa16.27■□□□□ 0.19
PDLIM7-202ENST00000355841 VMACQ2NL98 169 aa16.27■□□□□ 0.19
PDLIM7-202ENST00000355841 EIPR1Q53HC9 387 aa16.27■□□□□ 0.19
PDLIM7-202ENST00000355841 RINLQ6ZS11 566 aa16.27■□□□□ 0.19
PDLIM7-202ENST00000355841 ARPINQ7Z6K5 226 aa16.27■□□□□ 0.19
PDLIM7-202ENST00000355841 YRDCQ86U90 279 aaKnown RBP16.27■□□□□ 0.19
PDLIM7-202ENST00000355841 PEX5LQ8IYB4 626 aa16.27■□□□□ 0.19
PDLIM7-202ENST00000355841 RNF148Q8N7C7 305 aa16.27■□□□□ 0.19
PDLIM7-202ENST00000355841 FADS6Q8N9I5 356 aa16.27■□□□□ 0.19
PDLIM7-202ENST00000355841 RBM15BQ8NDT2 890 aaKnown RBP16.27■□□□□ 0.19
PDLIM7-202ENST00000355841 HIPK4Q8NE63 616 aa16.27■□□□□ 0.19
PDLIM7-202ENST00000355841 BBS10Q8TAM1 723 aa16.27■□□□□ 0.19
PDLIM7-202ENST00000355841 SLC6A15Q9H2J7 730 aa16.27■□□□□ 0.19
PDLIM7-202ENST00000355841 ADA2Q9NZK5 511 aa16.27■□□□□ 0.19
PDLIM7-202ENST00000355841 TNFRSF10DQ9UBN6 386 aa16.27■□□□□ 0.19
PDLIM7-202ENST00000355841 SVILO95425 2214 aa16.27■□□□□ 0.19
PDLIM7-202ENST00000355841 GCM2O75603 506 aaPredicted RBP16.26■□□□□ 0.19
PDLIM7-202ENST00000355841 CBR3O75828 277 aa16.26■□□□□ 0.19
PDLIM7-202ENST00000355841 CSTAP01040 98 aa16.26■□□□□ 0.19
PDLIM7-202ENST00000355841 UBL4AP11441 157 aa16.26■□□□□ 0.19
PDLIM7-202ENST00000355841 CALB2P22676 271 aa16.26■□□□□ 0.19
PDLIM7-202ENST00000355841 KCNJ10P78508 379 aa16.26■□□□□ 0.19
PDLIM7-202ENST00000355841 SLC10A1Q14973 349 aa16.26■□□□□ 0.19
PDLIM7-202ENST00000355841 WIPI1Q5MNZ9 446 aaPredicted RBP16.26■□□□□ 0.19
PDLIM7-202ENST00000355841 ARSKQ6UWY0 536 aa16.26■□□□□ 0.19
PDLIM7-202ENST00000355841 SPPL2CQ8IUH8 684 aa16.26■□□□□ 0.19
PDLIM7-202ENST00000355841 TMCO5AQ8N6Q1 288 aa16.26■□□□□ 0.19
PDLIM7-202ENST00000355841 OR2T12Q8NG77 320 aa16.26■□□□□ 0.19
PDLIM7-202ENST00000355841 WDR60Q8WVS4 1066 aa16.26■□□□□ 0.19
PDLIM7-202ENST00000355841 REXO5Q96IC2 774 aaKnown RBP16.26■□□□□ 0.19
PDLIM7-202ENST00000355841 GPR137Q96N19 417 aa16.26■□□□□ 0.19
PDLIM7-202ENST00000355841 SPAG4Q9NPE6 437 aa16.26■□□□□ 0.19
PDLIM7-202ENST00000355841 ANGPT4Q9Y264 503 aa16.26■□□□□ 0.19
PDLIM7-202ENST00000355841 RPH3AQ9Y2J0 694 aaPredicted RBP16.26■□□□□ 0.19
PDLIM7-202ENST00000355841 NBASA2RRP1 2371 aa16.26■□□□□ 0.19
PDLIM7-202ENST00000355841 DBIP07108 87 aaKnown RBP16.25■□□□□ 0.19
PDLIM7-202ENST00000355841 PCGF2P35227 344 aa16.25■□□□□ 0.19
PDLIM7-202ENST00000355841 CPOXP36551 454 aa16.25■□□□□ 0.19
PDLIM7-202ENST00000355841 CCR4P51679 360 aa16.25■□□□□ 0.19
PDLIM7-202ENST00000355841 MNAT1P51948 309 aa16.25■□□□□ 0.19
PDLIM7-202ENST00000355841 RBBP4Q09028 425 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms