RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 SQSTM1Q13501 440 aa16.96■□□□□ 0.31
COL18A1-202ENST00000355480 USF2Q15853 346 aaPredicted RBP16.96■□□□□ 0.31
COL18A1-202ENST00000355480 FAM78AQ5JUQ0 283 aa16.96■□□□□ 0.31
COL18A1-202ENST00000355480 CPZQ66K79 652 aa16.96■□□□□ 0.31
COL18A1-202ENST00000355480 MEX3DQ86XN8 651 aaKnown RBP16.96■□□□□ 0.31
COL18A1-202ENST00000355480 GPR148Q8TDV2 347 aa16.96■□□□□ 0.31
COL18A1-202ENST00000355480 OR10A5Q9H207 317 aa16.96■□□□□ 0.31
COL18A1-202ENST00000355480 OR10A2Q9H208 303 aa16.96■□□□□ 0.31
COL18A1-202ENST00000355480 POT1Q9NUX5 634 aa16.96■□□□□ 0.31
COL18A1-202ENST00000355480 PLSCR5A0PG75 271 aa16.95■□□□□ 0.3
COL18A1-202ENST00000355480 IDUAP35475 653 aa16.95■□□□□ 0.3
COL18A1-202ENST00000355480 ETV4P43268 484 aa16.95■□□□□ 0.3
COL18A1-202ENST00000355480 NCS1P62166 190 aa16.95■□□□□ 0.3
COL18A1-202ENST00000355480 HOXC5Q00444 222 aa16.95■□□□□ 0.3
COL18A1-202ENST00000355480 CMTM1Q8IZ96 169 aa16.95■□□□□ 0.3
COL18A1-202ENST00000355480 B3GNT2Q9NY97 397 aa16.95■□□□□ 0.3
COL18A1-202ENST00000355480 CAMK2AQ9UQM7 478 aa16.95■□□□□ 0.3
COL18A1-202ENST00000355480 ZFAND5O76080 213 aa16.95■□□□□ 0.3
COL18A1-202ENST00000355480 C1orf105O95561 183 aa16.95■□□□□ 0.3
COL18A1-202ENST00000355480 PRDX3P30048 256 aaKnown RBP16.95■□□□□ 0.3
COL18A1-202ENST00000355480 CSNK1DP48730 415 aa16.95■□□□□ 0.3
COL18A1-202ENST00000355480 VASPP50552 380 aaPredicted RBP16.95■□□□□ 0.3
COL18A1-202ENST00000355480 WNT4P56705 351 aa16.95■□□□□ 0.3
COL18A1-202ENST00000355480 MRPS21P82921 87 aaKnown RBP16.95■□□□□ 0.3
COL18A1-202ENST00000355480 VEZF1Q14119 521 aa16.95■□□□□ 0.3
COL18A1-202ENST00000355480 MARCH8Q5T0T0 291 aa16.95■□□□□ 0.3
COL18A1-202ENST00000355480 PIP5KL1Q5T9C9 394 aa16.95■□□□□ 0.3
COL18A1-202ENST00000355480 C22orf15Q8WYQ4 148 aa16.95■□□□□ 0.3
COL18A1-202ENST00000355480 CHFRQ96EP1 664 aa16.95■□□□□ 0.3
COL18A1-202ENST00000355480 ZNF300Q96RE9 604 aaPredicted RBP16.95■□□□□ 0.3
COL18A1-202ENST00000355480 DNMT3BQ9UBC3 853 aaKnown RBP16.95■□□□□ 0.3
COL18A1-202ENST00000355480 POLHQ9Y253 713 aa16.95■□□□□ 0.3
COL18A1-202ENST00000355480 GABRR3A8MPY1 467 aa16.95■□□□□ 0.3
COL18A1-202ENST00000355480 OR8U9P0C7N5 309 aa16.95■□□□□ 0.3
COL18A1-202ENST00000355480 PRSS3P35030 304 aa16.95■□□□□ 0.3
COL18A1-202ENST00000355480 TMEM150AQ86TG1 271 aa16.95■□□□□ 0.3
COL18A1-202ENST00000355480 SLC6A16Q9GZN6 736 aa16.95■□□□□ 0.3
COL18A1-202ENST00000355480 VSX1Q9NZR4 365 aaPredicted RBP16.95■□□□□ 0.3
COL18A1-202ENST00000355480 NENFQ9UMX5 172 aa16.95■□□□□ 0.3
COL18A1-202ENST00000355480 CDC14CA4D256 554 aa16.95■□□□□ 0.3
COL18A1-202ENST00000355480 MYF6P23409 242 aa16.95■□□□□ 0.3
COL18A1-202ENST00000355480 HLA-FP30511 346 aa16.95■□□□□ 0.3
COL18A1-202ENST00000355480 ERV3-1Q14264 604 aa16.95■□□□□ 0.3
COL18A1-202ENST00000355480 C6orf183Q5T699 404 aa16.95■□□□□ 0.3
COL18A1-202ENST00000355480 ZNF610Q8N9Z0 462 aa16.95■□□□□ 0.3
COL18A1-202ENST00000355480 SLC6A14Q9UN76 642 aa16.95■□□□□ 0.3
COL18A1-202ENST00000355480 ABOP16442 354 aa16.95■□□□□ 0.3
COL18A1-202ENST00000355480 PRLHRP49683 370 aa16.95■□□□□ 0.3
COL18A1-202ENST00000355480 PCGF3Q3KNV8 242 aa16.95■□□□□ 0.3
COL18A1-202ENST00000355480 OR5M10Q6IEU7 315 aa16.95■□□□□ 0.3
COL18A1-202ENST00000355480 OR5T1Q8NG75 326 aa16.95■□□□□ 0.3
COL18A1-202ENST00000355480 RSC1A1Q92681 617 aa16.95■□□□□ 0.3
COL18A1-202ENST00000355480 MS4A4AQ96JQ5 239 aa16.95■□□□□ 0.3
COL18A1-202ENST00000355480 OR5B12Q96R08 314 aa16.95■□□□□ 0.3
COL18A1-202ENST00000355480 INTS14Q96SY0 518 aa16.95■□□□□ 0.3
COL18A1-202ENST00000355480 ST6GALNAC5Q9BVH7 336 aa16.95■□□□□ 0.3
COL18A1-202ENST00000355480 EBF1Q9UH73 591 aa16.95■□□□□ 0.3
COL18A1-202ENST00000355480 CENPBD1B2RD01 187 aa16.94■□□□□ 0.3
COL18A1-202ENST00000355480 BMXP51813 675 aa16.94■□□□□ 0.3
COL18A1-202ENST00000355480 TLDC1Q6P9B6 456 aa16.94■□□□□ 0.3
COL18A1-202ENST00000355480 BORAQ6PGQ7 559 aa16.94■□□□□ 0.3
COL18A1-202ENST00000355480 ZNF695Q8IW36 515 aa16.94■□□□□ 0.3
COL18A1-202ENST00000355480 ZNF480Q8WV37 535 aa16.94■□□□□ 0.3
COL18A1-202ENST00000355480 TRUB1Q8WWH5 349 aaKnown RBP16.94■□□□□ 0.3
COL18A1-202ENST00000355480 MYLIPQ8WY64 445 aa16.94■□□□□ 0.3
COL18A1-202ENST00000355480 TXNDC15Q96J42 360 aa16.94■□□□□ 0.3
COL18A1-202ENST00000355480 LMF2Q9BU23 707 aaKnown RBP16.94■□□□□ 0.3
COL18A1-202ENST00000355480 ULBP3Q9BZM4 244 aa16.94■□□□□ 0.3
COL18A1-202ENST00000355480 EMC3Q9P0I2 261 aa16.94■□□□□ 0.3
COL18A1-202ENST00000355480 RHBDD3Q9Y3P4 386 aa16.94■□□□□ 0.3
COL18A1-202ENST00000355480 ADAM12O43184 909 aa16.94■□□□□ 0.3
COL18A1-202ENST00000355480 GPR39O43194 453 aa16.94■□□□□ 0.3
COL18A1-202ENST00000355480 LPLP06858 475 aa16.94■□□□□ 0.3
COL18A1-202ENST00000355480 HIST1H1TP22492 207 aaPredicted RBP16.94■□□□□ 0.3
COL18A1-202ENST00000355480 GPR50Q13585 617 aa16.94■□□□□ 0.3
COL18A1-202ENST00000355480 BPIFA2Q96DR5 249 aa16.94■□□□□ 0.3
COL18A1-202ENST00000355480 TOX2Q96NM4 488 aa16.94■□□□□ 0.3
COL18A1-202ENST00000355480 MYADMQ96S97 322 aa16.94■□□□□ 0.3
COL18A1-202ENST00000355480 NTMT1Q9BV86 223 aa16.94■□□□□ 0.3
COL18A1-202ENST00000355480 CNOT11Q9UKZ1 510 aaKnown RBP16.94■□□□□ 0.3
COL18A1-202ENST00000355480 IL7P13232 177 aa16.94■□□□□ 0.3
COL18A1-202ENST00000355480 CAMLGP49069 296 aa16.94■□□□□ 0.3
COL18A1-202ENST00000355480 CHRNEQ04844 493 aa16.94■□□□□ 0.3
COL18A1-202ENST00000355480 RBPJQ06330 500 aa16.94■□□□□ 0.3
COL18A1-202ENST00000355480 CPT1CQ8TCG5 803 aa16.94■□□□□ 0.3
COL18A1-202ENST00000355480 CUTCQ9NTM9 273 aa16.94■□□□□ 0.3
COL18A1-202ENST00000355480 DCTP40126 519 aa16.94■□□□□ 0.3
COL18A1-202ENST00000355480 ADARB1P78563 741 aaKnown RBP16.94■□□□□ 0.3
COL18A1-202ENST00000355480 CCNJQ5T5M9 372 aa16.94■□□□□ 0.3
COL18A1-202ENST00000355480 CRYGNQ8WXF5 182 aa16.94■□□□□ 0.3
COL18A1-202ENST00000355480 ZNF696Q9H7X3 374 aa16.94■□□□□ 0.3
COL18A1-202ENST00000355480 YARS2Q9Y2Z4 477 aaKnown RBP16.94■□□□□ 0.3
COL18A1-202ENST00000355480 LOC102725191A0A1B0GVB3 256 aa16.94■□□□□ 0.3
COL18A1-202ENST00000355480 HIDE1A8MVS5 230 aa16.94■□□□□ 0.3
COL18A1-202ENST00000355480 H7C2Y5 167 aa16.94■□□□□ 0.3
COL18A1-202ENST00000355480 LCKP06239 509 aa16.94■□□□□ 0.3
COL18A1-202ENST00000355480 BMP2P12643 396 aa16.94■□□□□ 0.3
COL18A1-202ENST00000355480 TRA2BP62995 288 aaKnown RBP16.94■□□□□ 0.3
COL18A1-202ENST00000355480 CCBE1Q6UXH8 406 aaPredicted RBP16.94■□□□□ 0.3
COL18A1-202ENST00000355480 TBC1D20Q96BZ9 403 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms