RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 PXDC1Q5TGL8 231 aa12□□□□□ -0.49
SYNCRIP-201ENST00000355238 NRSN1Q8IZ57 195 aa12□□□□□ -0.49
SYNCRIP-201ENST00000355238 LMO7Q8WWI1 1683 aa12□□□□□ -0.49
SYNCRIP-201ENST00000355238 FAM208AQ9UK61 1670 aaKnown RBP12□□□□□ -0.49
SYNCRIP-201ENST00000355238 A0A0G2JLL6 359 aaPredicted RBP12□□□□□ -0.49
SYNCRIP-201ENST00000355238 SLC22A23A1A5C7 686 aa12□□□□□ -0.49
SYNCRIP-201ENST00000355238 INHAP05111 366 aa12□□□□□ -0.49
SYNCRIP-201ENST00000355238 DAPP51397 102 aa12□□□□□ -0.49
SYNCRIP-201ENST00000355238 RPS15AP62244 130 aaKnown RBP12□□□□□ -0.49
SYNCRIP-201ENST00000355238 CAMK2DQ13557 499 aa12□□□□□ -0.49
SYNCRIP-201ENST00000355238 GPR50Q13585 617 aa12□□□□□ -0.49
SYNCRIP-201ENST00000355238 AAK1Q2M2I8 961 aa12□□□□□ -0.49
SYNCRIP-201ENST00000355238 ADPRMQ3LIE5 342 aa12□□□□□ -0.49
SYNCRIP-201ENST00000355238 PM20D1Q6GTS8 502 aa12□□□□□ -0.49
SYNCRIP-201ENST00000355238 FAM83HQ6ZRV2 1179 aaPredicted RBP12□□□□□ -0.49
SYNCRIP-201ENST00000355238 PRRT2Q7Z6L0 340 aaPredicted RBP12□□□□□ -0.49
SYNCRIP-201ENST00000355238 ZNF619Q8N2I2 560 aa12□□□□□ -0.49
SYNCRIP-201ENST00000355238 SLC22A8Q8TCC7 542 aa12□□□□□ -0.49
SYNCRIP-201ENST00000355238 PGAP3Q96FM1 320 aaPredicted RBP12□□□□□ -0.49
SYNCRIP-201ENST00000355238 BTF3L4Q96K17 158 aa12□□□□□ -0.49
SYNCRIP-201ENST00000355238 HRASLS5Q96KN8 279 aa12□□□□□ -0.49
SYNCRIP-201ENST00000355238 C10orf90Q96M02 699 aa12□□□□□ -0.49
SYNCRIP-201ENST00000355238 FAM83CQ9BQN1 747 aa12□□□□□ -0.49
SYNCRIP-201ENST00000355238 OR8D2Q9GZM6 311 aa12□□□□□ -0.49
SYNCRIP-201ENST00000355238 MTMR11A4FU01 709 aa11.99□□□□□ -0.49
SYNCRIP-201ENST00000355238 MTNR1BP49286 362 aa11.99□□□□□ -0.49
SYNCRIP-201ENST00000355238 ZNF805Q5CZA5 627 aa11.99□□□□□ -0.49
SYNCRIP-201ENST00000355238 ZNF789Q5FWF6 425 aa11.99□□□□□ -0.49
SYNCRIP-201ENST00000355238 HIST2H3PS2Q5TEC6 136 aa11.99□□□□□ -0.49
SYNCRIP-201ENST00000355238 ARHGAP40Q5TG30 622 aa11.99□□□□□ -0.49
SYNCRIP-201ENST00000355238 GATSQ8NAP1 163 aa11.99□□□□□ -0.49
SYNCRIP-201ENST00000355238 OR4Q3Q8NH05 313 aa11.99□□□□□ -0.49
SYNCRIP-201ENST00000355238 ZFAND1Q8TCF1 268 aa11.99□□□□□ -0.49
SYNCRIP-201ENST00000355238 KIAA0355O15063 1070 aa11.99□□□□□ -0.49
SYNCRIP-201ENST00000355238 ETV3P41162 512 aa11.99□□□□□ -0.49
SYNCRIP-201ENST00000355238 TMEM41BQ5BJD5 291 aa11.99□□□□□ -0.49
SYNCRIP-201ENST00000355238 CMTM1Q8IZ96 169 aa11.99□□□□□ -0.49
SYNCRIP-201ENST00000355238 SCAMP4Q969E2 229 aa11.99□□□□□ -0.49
SYNCRIP-201ENST00000355238 MVB12BQ9H7P6 319 aa11.99□□□□□ -0.49
SYNCRIP-201ENST00000355238 GPRIN2O60269 458 aa11.99□□□□□ -0.49
SYNCRIP-201ENST00000355238 LILRB5O75023 590 aa11.99□□□□□ -0.49
SYNCRIP-201ENST00000355238 SCGB1D1O95968 90 aa11.99□□□□□ -0.49
SYNCRIP-201ENST00000355238 PTHP01270 115 aa11.99□□□□□ -0.49
SYNCRIP-201ENST00000355238 GDNFP39905 211 aa11.99□□□□□ -0.49
SYNCRIP-201ENST00000355238 HTR4Q13639 388 aa11.99□□□□□ -0.49
SYNCRIP-201ENST00000355238 RTL6Q6ICC9 239 aa11.99□□□□□ -0.49
SYNCRIP-201ENST00000355238 PTRH1Q86Y79 214 aaKnown RBP11.99□□□□□ -0.49
SYNCRIP-201ENST00000355238 OR51T1Q8NGJ9 327 aa11.99□□□□□ -0.49
SYNCRIP-201ENST00000355238 MARC2Q969Z3 335 aa11.99□□□□□ -0.49
SYNCRIP-201ENST00000355238 LRRC46Q96FV0 321 aa11.99□□□□□ -0.49
SYNCRIP-201ENST00000355238 PKMYT1Q99640 499 aa11.99□□□□□ -0.49
SYNCRIP-201ENST00000355238 GALNT9Q9HCQ5 603 aa11.99□□□□□ -0.49
SYNCRIP-201ENST00000355238 A6NIN4 97 aa11.99□□□□□ -0.49
SYNCRIP-201ENST00000355238 AIPO00170 330 aa11.99□□□□□ -0.49
SYNCRIP-201ENST00000355238 GKP32189 559 aa11.99□□□□□ -0.49
SYNCRIP-201ENST00000355238 PPT1P50897 306 aa11.99□□□□□ -0.49
SYNCRIP-201ENST00000355238 FPGSQ05932 587 aa11.99□□□□□ -0.49
SYNCRIP-201ENST00000355238 PGGHGQ32M88 737 aa11.99□□□□□ -0.49
SYNCRIP-201ENST00000355238 PAN3Q58A45 887 aaKnown RBP11.99□□□□□ -0.49
SYNCRIP-201ENST00000355238 TMEM239Q8WW34 195 aa11.99□□□□□ -0.49
SYNCRIP-201ENST00000355238 RADILQ96JH8 1075 aa11.99□□□□□ -0.49
SYNCRIP-201ENST00000355238 PELI2Q9HAT8 420 aa11.99□□□□□ -0.49
SYNCRIP-201ENST00000355238 FBXO8Q9NRD0 319 aa11.99□□□□□ -0.49
SYNCRIP-201ENST00000355238 DZANK1Q9NVP4 752 aa11.99□□□□□ -0.49
SYNCRIP-201ENST00000355238 GJD2Q9UKL4 321 aa11.99□□□□□ -0.49
SYNCRIP-201ENST00000355238 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.99□□□□□ -0.49
SYNCRIP-201ENST00000355238 TMEM82A0PJX8 343 aa11.99□□□□□ -0.49
SYNCRIP-201ENST00000355238 TPPPO94811 219 aa11.99□□□□□ -0.49
SYNCRIP-201ENST00000355238 CASRP41180 1078 aa11.99□□□□□ -0.49
SYNCRIP-201ENST00000355238 PLP2Q04941 152 aa11.99□□□□□ -0.49
SYNCRIP-201ENST00000355238 LTBQ06643 244 aa11.99□□□□□ -0.49
SYNCRIP-201ENST00000355238 CDC20Q12834 499 aa11.99□□□□□ -0.49
SYNCRIP-201ENST00000355238 TANGO2Q6ICL3 276 aa11.99□□□□□ -0.49
SYNCRIP-201ENST00000355238 PXYLP1Q8TE99 480 aa11.99□□□□□ -0.49
SYNCRIP-201ENST00000355238 PITHD1Q9GZP4 211 aaPredicted RBP11.99□□□□□ -0.49
SYNCRIP-201ENST00000355238 NIT2Q9NQR4 276 aa11.99□□□□□ -0.49
SYNCRIP-201ENST00000355238 FBXL2Q9UKC9 423 aa11.99□□□□□ -0.49
SYNCRIP-201ENST00000355238 POLMQ9NP87 494 aaPredicted RBP11.98□□□□□ -0.49
SYNCRIP-201ENST00000355238 MED17Q9NVC6 651 aa11.98□□□□□ -0.49
SYNCRIP-201ENST00000355238 NENFQ9UMX5 172 aa11.98□□□□□ -0.49
SYNCRIP-201ENST00000355238 RTCAO00442 366 aaKnown RBP11.98□□□□□ -0.49
SYNCRIP-201ENST00000355238 POU3F4P49335 361 aa11.98□□□□□ -0.49
SYNCRIP-201ENST00000355238 ADARB1P78563 741 aaKnown RBP11.98□□□□□ -0.49
SYNCRIP-201ENST00000355238 RAB6CQ53S08 254 aa11.98□□□□□ -0.49
SYNCRIP-201ENST00000355238 TIGD3Q6B0B8 471 aa11.98□□□□□ -0.49
SYNCRIP-201ENST00000355238 TEPSINQ96N21 525 aa11.98□□□□□ -0.49
SYNCRIP-201ENST00000355238 MS4A4EQ96PG1 132 aa11.98□□□□□ -0.49
SYNCRIP-201ENST00000355238 HOXD1Q9GZZ0 328 aa11.98□□□□□ -0.49
SYNCRIP-201ENST00000355238 RAB6CQ9H0N0 254 aa11.98□□□□□ -0.49
SYNCRIP-201ENST00000355238 PIGMQ9H3S5 423 aa11.98□□□□□ -0.49
SYNCRIP-201ENST00000355238 OR2A25A4D2G3 310 aa11.98□□□□□ -0.49
SYNCRIP-201ENST00000355238 AGAP14A8MT82 685 aa11.98□□□□□ -0.49
SYNCRIP-201ENST00000355238 CCNOP22674 350 aa11.98□□□□□ -0.49
SYNCRIP-201ENST00000355238 RPL23AP62750 156 aaKnown RBP11.98□□□□□ -0.49
SYNCRIP-201ENST00000355238 BEX5Q5H9J7 111 aa11.98□□□□□ -0.49
SYNCRIP-201ENST00000355238 ZNF425Q6IV72 752 aa11.98□□□□□ -0.49
SYNCRIP-201ENST00000355238 FIGNL1Q6PIW4 674 aa11.98□□□□□ -0.49
SYNCRIP-201ENST00000355238 BPIFB2Q8N4F0 458 aa11.98□□□□□ -0.49
SYNCRIP-201ENST00000355238 CYB561A3Q8NBI2 242 aa11.98□□□□□ -0.49
SYNCRIP-201ENST00000355238 DUSP19Q8WTR2 217 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms