RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 WNT1P04628 370 aa12.93□□□□□ -0.34
TRIM4-201ENST00000349062 NOS3P29474 1203 aa12.93□□□□□ -0.34
TRIM4-201ENST00000349062 TGFBR2P37173 567 aa12.93□□□□□ -0.34
TRIM4-201ENST00000349062 CD79BP40259 229 aa12.93□□□□□ -0.34
TRIM4-201ENST00000349062 ST3GAL3Q11203 375 aa12.93□□□□□ -0.34
TRIM4-201ENST00000349062 ZNF791Q3KP31 576 aaPredicted RBP12.93□□□□□ -0.34
TRIM4-201ENST00000349062 FLYWCH1Q4VC44 716 aa12.93□□□□□ -0.34
TRIM4-201ENST00000349062 ZMAT1Q5H9K5 638 aa12.93□□□□□ -0.34
TRIM4-201ENST00000349062 AGAP6Q5VW22 663 aa12.93□□□□□ -0.34
TRIM4-201ENST00000349062 ARL14Q8N4G2 192 aa12.93□□□□□ -0.34
TRIM4-201ENST00000349062 CAMKK1Q8N5S9 505 aa12.93□□□□□ -0.34
TRIM4-201ENST00000349062 FLVCR1-AS1Q8TAF5 88 aa12.93□□□□□ -0.34
TRIM4-201ENST00000349062 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.93□□□□□ -0.34
TRIM4-201ENST00000349062 AGAP4Q96P64 663 aa12.93□□□□□ -0.34
TRIM4-201ENST00000349062 H2AFY2Q9P0M6 372 aaPredicted RBP12.93□□□□□ -0.34
TRIM4-201ENST00000349062 CHST2Q9Y4C5 530 aa12.93□□□□□ -0.34
TRIM4-201ENST00000349062 OR5K3A6NET4 321 aa12.92□□□□□ -0.34
TRIM4-201ENST00000349062 SOX30O94993 753 aa12.92□□□□□ -0.34
TRIM4-201ENST00000349062 TEAD1P28347 426 aa12.92□□□□□ -0.34
TRIM4-201ENST00000349062 LIMS1P48059 325 aa12.92□□□□□ -0.34
TRIM4-201ENST00000349062 BNC1Q01954 994 aa12.92□□□□□ -0.34
TRIM4-201ENST00000349062 TRAM2Q15035 370 aa12.92□□□□□ -0.34
TRIM4-201ENST00000349062 FBXO43Q4G163 708 aa12.92□□□□□ -0.34
TRIM4-201ENST00000349062 CCDC58Q4VC31 144 aa12.92□□□□□ -0.34
TRIM4-201ENST00000349062 PLAG1Q6DJT9 500 aa12.92□□□□□ -0.34
TRIM4-201ENST00000349062 GDF7Q7Z4P5 450 aa12.92□□□□□ -0.34
TRIM4-201ENST00000349062 C10orf53Q8N6V4 93 aa12.92□□□□□ -0.34
TRIM4-201ENST00000349062 FYTTD1Q96QD9 318 aaKnown RBP12.92□□□□□ -0.34
TRIM4-201ENST00000349062 LMF1Q96S06 567 aa12.92□□□□□ -0.34
TRIM4-201ENST00000349062 BTBD2Q9BX70 525 aa12.92□□□□□ -0.34
TRIM4-201ENST00000349062 TRIM45Q9H8W5 580 aaPredicted RBP12.92□□□□□ -0.34
TRIM4-201ENST00000349062 NUFIP1Q9UHK0 495 aaKnown RBP12.92□□□□□ -0.34
TRIM4-201ENST00000349062 DTX4Q9Y2E6 619 aa12.92□□□□□ -0.34
TRIM4-201ENST00000349062 A0A1W2PPC4 97 aa12.92□□□□□ -0.34
TRIM4-201ENST00000349062 ISPDA4D126 451 aa12.92□□□□□ -0.34
TRIM4-201ENST00000349062 DUXAA6NLW8 204 aa12.92□□□□□ -0.34
TRIM4-201ENST00000349062 DSCR3O14972 297 aa12.92□□□□□ -0.34
TRIM4-201ENST00000349062 GPR75O95800 540 aa12.92□□□□□ -0.34
TRIM4-201ENST00000349062 MLLT3P42568 568 aaPredicted RBP12.92□□□□□ -0.34
TRIM4-201ENST00000349062 HMGA2P52926 109 aa12.92□□□□□ -0.34
TRIM4-201ENST00000349062 YPEL5P62699 121 aa12.92□□□□□ -0.34
TRIM4-201ENST00000349062 SMUG1Q53HV7 270 aa12.92□□□□□ -0.34
TRIM4-201ENST00000349062 OR51G2Q8NGK0 314 aa12.92□□□□□ -0.34
TRIM4-201ENST00000349062 FBLIM1Q8WUP2 373 aa12.92□□□□□ -0.34
TRIM4-201ENST00000349062 TM9SF2Q99805 663 aa12.92□□□□□ -0.34
TRIM4-201ENST00000349062 PINK1Q9BXM7 581 aa12.92□□□□□ -0.34
TRIM4-201ENST00000349062 NRSN2Q9GZP1 204 aa12.92□□□□□ -0.34
TRIM4-201ENST00000349062 RACGAP1Q9H0H5 632 aa12.92□□□□□ -0.34
TRIM4-201ENST00000349062 FBRSQ9HAH7 460 aa12.92□□□□□ -0.34
TRIM4-201ENST00000349062 ABCB9Q9NP78 766 aa12.92□□□□□ -0.34
TRIM4-201ENST00000349062 C20orf141Q9NUB4 165 aa12.92□□□□□ -0.34
TRIM4-201ENST00000349062 ERVK-19Q9WJR5 959 aa12.92□□□□□ -0.34
TRIM4-201ENST00000349062 MAP1BP46821 2468 aaKnown RBP12.92□□□□□ -0.34
TRIM4-201ENST00000349062 PI4KAP42356 2102 aa12.92□□□□□ -0.34
TRIM4-201ENST00000349062 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.92□□□□□ -0.34
TRIM4-201ENST00000349062 MBTPS2O43462 519 aa12.92□□□□□ -0.34
TRIM4-201ENST00000349062 REM1O75628 298 aa12.92□□□□□ -0.34
TRIM4-201ENST00000349062 TSPAN19P0C672 248 aa12.92□□□□□ -0.34
TRIM4-201ENST00000349062 IL9P15248 144 aa12.92□□□□□ -0.34
TRIM4-201ENST00000349062 MYL12AP19105 171 aa12.92□□□□□ -0.34
TRIM4-201ENST00000349062 SNRPD2P62316 118 aaKnown RBP12.92□□□□□ -0.34
TRIM4-201ENST00000349062 SLC27A4Q6P1M0 643 aa12.92□□□□□ -0.34
TRIM4-201ENST00000349062 ZNF517Q6ZMY9 492 aaPredicted RBP12.92□□□□□ -0.34
TRIM4-201ENST00000349062 KBTBD8Q8NFY9 601 aa12.92□□□□□ -0.34
TRIM4-201ENST00000349062 NLGN4YQ8NFZ3 816 aaPredicted RBP12.92□□□□□ -0.34
TRIM4-201ENST00000349062 CNOT9Q92600 299 aaKnown RBP12.92□□□□□ -0.34
TRIM4-201ENST00000349062 RNFT2Q96EX2 444 aa12.92□□□□□ -0.34
TRIM4-201ENST00000349062 GIMAP5Q96F15 307 aa12.92□□□□□ -0.34
TRIM4-201ENST00000349062 SCARF2Q96GP6 870 aaPredicted RBP12.92□□□□□ -0.34
TRIM4-201ENST00000349062 OR8D2Q9GZM6 311 aa12.92□□□□□ -0.34
TRIM4-201ENST00000349062 SPRTNQ9H040 489 aaPredicted RBP12.92□□□□□ -0.34
TRIM4-201ENST00000349062 ENKD1Q9H0I2 346 aa12.92□□□□□ -0.34
TRIM4-201ENST00000349062 UBE2ZQ9H832 354 aaPredicted RBP12.92□□□□□ -0.34
TRIM4-201ENST00000349062 SDK2Q58EX2 2172 aa12.91□□□□□ -0.34
TRIM4-201ENST00000349062 SHISA7A6NL88 538 aa12.91□□□□□ -0.34
TRIM4-201ENST00000349062 RHPN2P1A8MT19 583 aa12.91□□□□□ -0.34
TRIM4-201ENST00000349062 CDC42EP2O14613 210 aa12.91□□□□□ -0.34
TRIM4-201ENST00000349062 PROS1P07225 676 aa12.91□□□□□ -0.34
TRIM4-201ENST00000349062 CD38P28907 300 aa12.91□□□□□ -0.34
TRIM4-201ENST00000349062 GCGRP47871 477 aa12.91□□□□□ -0.34
TRIM4-201ENST00000349062 TDGQ13569 410 aa12.91□□□□□ -0.34
TRIM4-201ENST00000349062 INSL4Q14641 139 aa12.91□□□□□ -0.34
TRIM4-201ENST00000349062 SPHARQ15513 63 aa12.91□□□□□ -0.34
TRIM4-201ENST00000349062 ZNF544Q6NX49 715 aa12.91□□□□□ -0.34
TRIM4-201ENST00000349062 VWA5B2Q8N398 1253 aa12.91□□□□□ -0.34
TRIM4-201ENST00000349062 OR8J1Q8NGP2 316 aa12.91□□□□□ -0.34
TRIM4-201ENST00000349062 GPBAR1Q8TDU6 330 aa12.91□□□□□ -0.34
TRIM4-201ENST00000349062 RIT1Q92963 219 aa12.91□□□□□ -0.34
TRIM4-201ENST00000349062 POT1Q9NUX5 634 aa12.91□□□□□ -0.34
TRIM4-201ENST00000349062 ZSCAN32Q9NX65 697 aa12.91□□□□□ -0.34
TRIM4-201ENST00000349062 MALT1Q9UDY8 824 aa12.91□□□□□ -0.34
TRIM4-201ENST00000349062 KCND3Q9UK17 655 aa12.91□□□□□ -0.34
TRIM4-201ENST00000349062 PRR19A6NJB7 356 aa12.91□□□□□ -0.34
TRIM4-201ENST00000349062 H3BSH0 61 aa12.91□□□□□ -0.34
TRIM4-201ENST00000349062 SOCS6O14544 535 aa12.91□□□□□ -0.34
TRIM4-201ENST00000349062 TNFRSF10CO14798 259 aa12.91□□□□□ -0.34
TRIM4-201ENST00000349062 GALR3O60755 368 aaPredicted RBP12.91□□□□□ -0.34
TRIM4-201ENST00000349062 STX11O75558 287 aa12.91□□□□□ -0.34
TRIM4-201ENST00000349062 CHRNB1P11230 501 aa12.91□□□□□ -0.34
TRIM4-201ENST00000349062 GABRB1P18505 474 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms