RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 SLC35A3Q9Y2D2 325 aa24.8■■□□□ 1.56
SSBP4-202ENST00000348495 M0R3H8 397 aa24.79■■□□□ 1.56
SSBP4-202ENST00000348495 TAF4O00268 1085 aa24.79■■□□□ 1.56
SSBP4-202ENST00000348495 CCL11P51671 97 aa24.79■■□□□ 1.56
SSBP4-202ENST00000348495 BROXQ5VW32 411 aa24.79■■□□□ 1.56
SSBP4-202ENST00000348495 ISLR2Q6UXK2 745 aa24.79■■□□□ 1.56
SSBP4-202ENST00000348495 MARCH3Q86UD3 253 aa24.79■■□□□ 1.56
SSBP4-202ENST00000348495 ZNF227Q86WZ6 799 aa24.79■■□□□ 1.56
SSBP4-202ENST00000348495 CNOT9Q92600 299 aaKnown RBP24.79■■□□□ 1.56
SSBP4-202ENST00000348495 TBL1XR1Q9BZK7 514 aa24.79■■□□□ 1.56
SSBP4-202ENST00000348495 KLHL28Q9NXS3 571 aa24.79■■□□□ 1.56
SSBP4-202ENST00000348495 DNAJB12Q9NXW2 375 aaKnown RBP24.79■■□□□ 1.56
SSBP4-202ENST00000348495 SLC13A4Q9UKG4 626 aa24.79■■□□□ 1.56
SSBP4-202ENST00000348495 SLC9A8Q9Y2E8 581 aa24.79■■□□□ 1.56
SSBP4-202ENST00000348495 DMXL2Q8TDJ6 3036 aa24.79■■□□□ 1.56
SSBP4-202ENST00000348495 NINQ8N4C6 2090 aa24.78■■□□□ 1.56
SSBP4-202ENST00000348495 K7ENP7 123 aa24.78■■□□□ 1.56
SSBP4-202ENST00000348495 MT-ND1P03886 318 aa24.78■■□□□ 1.56
SSBP4-202ENST00000348495 PTGDSP41222 190 aa24.78■■□□□ 1.56
SSBP4-202ENST00000348495 GAS1P54826 345 aa24.78■■□□□ 1.56
SSBP4-202ENST00000348495 RAPSNQ13702 412 aa24.78■■□□□ 1.56
SSBP4-202ENST00000348495 INO80CQ6PI98 192 aaPredicted RBP24.78■■□□□ 1.56
SSBP4-202ENST00000348495 OR6T1Q8NGN1 323 aa24.78■■□□□ 1.56
SSBP4-202ENST00000348495 PAQR8Q8TEZ7 354 aa24.78■■□□□ 1.56
SSBP4-202ENST00000348495 SLC35B4Q969S0 331 aa24.78■■□□□ 1.56
SSBP4-202ENST00000348495 NTNG2Q96CW9 530 aa24.78■■□□□ 1.56
SSBP4-202ENST00000348495 AMBRA1Q9C0C7 1298 aa24.78■■□□□ 1.56
SSBP4-202ENST00000348495 ABI3Q9P2A4 366 aa24.78■■□□□ 1.56
SSBP4-202ENST00000348495 H3BNH8 94 aa24.78■■□□□ 1.56
SSBP4-202ENST00000348495 FRS3O43559 492 aa24.78■■□□□ 1.56
SSBP4-202ENST00000348495 CYB561P49447 251 aa24.78■■□□□ 1.56
SSBP4-202ENST00000348495 NPTX1Q15818 432 aa24.78■■□□□ 1.56
SSBP4-202ENST00000348495 LRRC69Q6ZNQ3 347 aa24.78■■□□□ 1.56
SSBP4-202ENST00000348495 RTL4Q6ZR62 310 aa24.78■■□□□ 1.56
SSBP4-202ENST00000348495 RBM45Q8IUH3 476 aaKnown RBP24.78■■□□□ 1.56
SSBP4-202ENST00000348495 ZDHHC21Q8IVQ6 265 aa24.78■■□□□ 1.56
SSBP4-202ENST00000348495 FDCSPQ8NFU4 85 aa24.78■■□□□ 1.56
SSBP4-202ENST00000348495 DCLRE1BQ9H816 532 aa24.78■■□□□ 1.56
SSBP4-202ENST00000348495 EVA1AQ9H8M9 152 aa24.78■■□□□ 1.56
SSBP4-202ENST00000348495 ANKRD10Q9NXR5 420 aa24.78■■□□□ 1.56
SSBP4-202ENST00000348495 NDUFAF4Q9P032 175 aa24.78■■□□□ 1.56
SSBP4-202ENST00000348495 CNOT11Q9UKZ1 510 aaKnown RBP24.78■■□□□ 1.56
SSBP4-202ENST00000348495 A0A087WV48 116 aa24.77■■□□□ 1.56
SSBP4-202ENST00000348495 hCG_2039718K7EN88 272 aa24.77■■□□□ 1.56
SSBP4-202ENST00000348495 SEMA7AO75326 666 aa24.77■■□□□ 1.56
SSBP4-202ENST00000348495 ANGPTL1O95841 491 aa24.77■■□□□ 1.56
SSBP4-202ENST00000348495 CSTAP01040 98 aa24.77■■□□□ 1.56
SSBP4-202ENST00000348495 IFNW1P05000 195 aa24.77■■□□□ 1.56
SSBP4-202ENST00000348495 FABP3P05413 133 aa24.77■■□□□ 1.56
SSBP4-202ENST00000348495 ENDOUP21128 410 aaKnown RBP24.77■■□□□ 1.56
SSBP4-202ENST00000348495 ITPKBP27987 946 aa24.77■■□□□ 1.56
SSBP4-202ENST00000348495 CASP3P42574 277 aa24.77■■□□□ 1.56
SSBP4-202ENST00000348495 ZNF136P52737 540 aa24.77■■□□□ 1.56
SSBP4-202ENST00000348495 MFAP5Q13361 173 aa24.77■■□□□ 1.56
SSBP4-202ENST00000348495 TUBA3CQ13748 450 aa24.77■■□□□ 1.56
SSBP4-202ENST00000348495 RCN1Q15293 331 aa24.77■■□□□ 1.56
SSBP4-202ENST00000348495 BICRALQ6AI39 1079 aa24.77■■□□□ 1.56
SSBP4-202ENST00000348495 TUBA3EQ6PEY2 450 aa24.77■■□□□ 1.56
SSBP4-202ENST00000348495 LINC00696Q6ZRV3 163 aa24.77■■□□□ 1.56
SSBP4-202ENST00000348495 CYP4Z2PQ8N1L4 340 aa24.77■■□□□ 1.56
SSBP4-202ENST00000348495 GATSQ8NAP1 163 aa24.77■■□□□ 1.56
SSBP4-202ENST00000348495 VANGL1Q8TAA9 524 aaPredicted RBP24.77■■□□□ 1.56
SSBP4-202ENST00000348495 PHOSPHO1Q8TCT1 267 aa24.77■■□□□ 1.56
SSBP4-202ENST00000348495 CPNE5Q9HCH3 593 aa24.77■■□□□ 1.56
SSBP4-202ENST00000348495 HNRNPRO43390 633 aaKnown RBP24.76■■□□□ 1.55
SSBP4-202ENST00000348495 NDUFB5O43674 189 aa24.76■■□□□ 1.55
SSBP4-202ENST00000348495 TIPRLO75663 272 aa24.76■■□□□ 1.55
SSBP4-202ENST00000348495 UBL4AP11441 157 aa24.76■■□□□ 1.55
SSBP4-202ENST00000348495 CD96P40200 585 aa24.76■■□□□ 1.55
SSBP4-202ENST00000348495 RPP38P78345 283 aaKnown RBP24.76■■□□□ 1.55
SSBP4-202ENST00000348495 SNTA1Q13424 505 aa24.76■■□□□ 1.55
SSBP4-202ENST00000348495 ZNF300Q96RE9 604 aaPredicted RBP24.76■■□□□ 1.55
SSBP4-202ENST00000348495 RNF32Q9H0A6 362 aa24.76■■□□□ 1.55
SSBP4-202ENST00000348495 YY1AP1Q9H869 796 aa24.76■■□□□ 1.55
SSBP4-202ENST00000348495 ENPP4Q9Y6X5 453 aa24.76■■□□□ 1.55
SSBP4-202ENST00000348495 H0Y3Z8 333 aa24.75■■□□□ 1.55
SSBP4-202ENST00000348495 OIP5O43482 229 aa24.75■■□□□ 1.55
SSBP4-202ENST00000348495 SCO2O43819 266 aa24.75■■□□□ 1.55
SSBP4-202ENST00000348495 TPST2O60704 377 aa24.75■■□□□ 1.55
SSBP4-202ENST00000348495 WDPCPO95876 746 aa24.75■■□□□ 1.55
SSBP4-202ENST00000348495 UBTFL6P0CB48 400 aaPredicted RBP24.75■■□□□ 1.55
SSBP4-202ENST00000348495 CCL3P10147 92 aa24.75■■□□□ 1.55
SSBP4-202ENST00000348495 CLK3P49761 638 aaKnown RBP24.75■■□□□ 1.55
SSBP4-202ENST00000348495 UCNP55089 124 aa24.75■■□□□ 1.55
SSBP4-202ENST00000348495 RGS8P57771 180 aaPredicted RBP24.75■■□□□ 1.55
SSBP4-202ENST00000348495 SKP2Q13309 424 aa24.75■■□□□ 1.55
SSBP4-202ENST00000348495 NDUFAF6Q330K2 333 aa24.75■■□□□ 1.55
SSBP4-202ENST00000348495 MDGA2Q7Z553 956 aa24.75■■□□□ 1.55
SSBP4-202ENST00000348495 LILRA2Q8N149 483 aa24.75■■□□□ 1.55
SSBP4-202ENST00000348495 PHF10Q8WUB8 498 aaKnown RBP24.75■■□□□ 1.55
SSBP4-202ENST00000348495 UTP23Q9BRU9 249 aaKnown RBP24.75■■□□□ 1.55
SSBP4-202ENST00000348495 METTL7AQ9H8H3 244 aa24.75■■□□□ 1.55
SSBP4-202ENST00000348495 GALNT9Q9HCQ5 603 aa24.75■■□□□ 1.55
SSBP4-202ENST00000348495 EXOSC3Q9NQT5 275 aaKnown RBP24.75■■□□□ 1.55
SSBP4-202ENST00000348495 CFAP47Q6ZTR5 3102 aa24.75■■□□□ 1.55
SSBP4-202ENST00000348495 ZNF264O43296 627 aa24.75■■□□□ 1.55
SSBP4-202ENST00000348495 ADAM11O75078 769 aa24.75■■□□□ 1.55
SSBP4-202ENST00000348495 PRG2P13727 222 aa24.75■■□□□ 1.55
SSBP4-202ENST00000348495 TMPRSS3P57727 454 aa24.75■■□□□ 1.55
SSBP4-202ENST00000348495 SLC22A10Q63ZE4 541 aa24.75■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms