RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 SLC47A1Q96FL8 570 aa17.4■□□□□ 0.38
CHMP4A-201ENST00000347519 SIGLEC12Q96PQ1 595 aa17.4■□□□□ 0.38
CHMP4A-201ENST00000347519 ARHGDIGQ99819 225 aa17.4■□□□□ 0.38
CHMP4A-201ENST00000347519 GALNT9Q9HCQ5 603 aa17.4■□□□□ 0.38
CHMP4A-201ENST00000347519 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.4■□□□□ 0.38
CHMP4A-201ENST00000347519 ZNF232Q9UNY5 417 aa17.4■□□□□ 0.38
CHMP4A-201ENST00000347519 SH3GLB1Q9Y371 365 aa17.4■□□□□ 0.38
CHMP4A-201ENST00000347519 HEATR5AQ86XA9 2040 aa17.39■□□□□ 0.37
CHMP4A-201ENST00000347519 LOC400499M0QZD8 3231 aa17.39■□□□□ 0.37
CHMP4A-201ENST00000347519 CDHR4A6H8M9 788 aa17.39■□□□□ 0.37
CHMP4A-201ENST00000347519 G3V3Y1 287 aa17.39■□□□□ 0.37
CHMP4A-201ENST00000347519 H3BNX3 289 aa17.39■□□□□ 0.37
CHMP4A-201ENST00000347519 ADAM11O75078 769 aa17.39■□□□□ 0.37
CHMP4A-201ENST00000347519 CASP3P42574 277 aa17.39■□□□□ 0.37
CHMP4A-201ENST00000347519 OC90Q02509 493 aaPredicted RBP17.39■□□□□ 0.37
CHMP4A-201ENST00000347519 NPTX1Q15818 432 aa17.39■□□□□ 0.37
CHMP4A-201ENST00000347519 NRF1Q16656 503 aa17.39■□□□□ 0.37
CHMP4A-201ENST00000347519 IQCCQ4KMZ1 466 aa17.39■□□□□ 0.37
CHMP4A-201ENST00000347519 IFI44LQ53G44 452 aa17.39■□□□□ 0.37
CHMP4A-201ENST00000347519 PRAMEF20Q5VT98 475 aa17.39■□□□□ 0.37
CHMP4A-201ENST00000347519 RTL4Q6ZR62 310 aa17.39■□□□□ 0.37
CHMP4A-201ENST00000347519 FKBP9P1Q75LS8 142 aa17.39■□□□□ 0.37
CHMP4A-201ENST00000347519 CARM1Q86X55 608 aa17.39■□□□□ 0.37
CHMP4A-201ENST00000347519 VANGL1Q8TAA9 524 aaPredicted RBP17.39■□□□□ 0.37
CHMP4A-201ENST00000347519 PAQR8Q8TEZ7 354 aa17.39■□□□□ 0.37
CHMP4A-201ENST00000347519 DUS3LQ96G46 650 aaKnown RBP17.39■□□□□ 0.37
CHMP4A-201ENST00000347519 CRELD1Q96HD1 420 aa17.39■□□□□ 0.37
CHMP4A-201ENST00000347519 C7orf34Q96L11 122 aa17.39■□□□□ 0.37
CHMP4A-201ENST00000347519 PRR14Q9BWN1 585 aa17.39■□□□□ 0.37
CHMP4A-201ENST00000347519 TRIM45Q9H8W5 580 aaPredicted RBP17.39■□□□□ 0.37
CHMP4A-201ENST00000347519 CCM2LQ9NUG4 571 aaPredicted RBP17.39■□□□□ 0.37
CHMP4A-201ENST00000347519 DNAJB12Q9NXW2 375 aaKnown RBP17.39■□□□□ 0.37
CHMP4A-201ENST00000347519 BAG5Q9UL15 447 aa17.39■□□□□ 0.37
CHMP4A-201ENST00000347519 AURKCQ9UQB9 309 aa17.39■□□□□ 0.37
CHMP4A-201ENST00000347519 PTPRQQ9UMZ3 2332 aa17.38■□□□□ 0.37
CHMP4A-201ENST00000347519 A0A0G2JMM0 328 aa17.38■□□□□ 0.37
CHMP4A-201ENST00000347519 A0A1W2PPB8 328 aa17.38■□□□□ 0.37
CHMP4A-201ENST00000347519 A0A1W2PQD3 144 aa17.38■□□□□ 0.37
CHMP4A-201ENST00000347519 A0A1W2PRS3 328 aa17.38■□□□□ 0.37
CHMP4A-201ENST00000347519 KIR3DP1A8MWS1 328 aa17.38■□□□□ 0.37
CHMP4A-201ENST00000347519 SYT5O00445 386 aa17.38■□□□□ 0.37
CHMP4A-201ENST00000347519 TP53I11O14683 189 aa17.38■□□□□ 0.37
CHMP4A-201ENST00000347519 TPST2O60704 377 aa17.38■□□□□ 0.37
CHMP4A-201ENST00000347519 NEURL1O76050 574 aa17.38■□□□□ 0.37
CHMP4A-201ENST00000347519 ANGPTL1O95841 491 aa17.38■□□□□ 0.37
CHMP4A-201ENST00000347519 GPIP06744 558 aa17.38■□□□□ 0.37
CHMP4A-201ENST00000347519 GKN3PP0CG01 181 aa17.38■□□□□ 0.37
CHMP4A-201ENST00000347519 UMPSP11172 480 aa17.38■□□□□ 0.37
CHMP4A-201ENST00000347519 PRG2P13727 222 aa17.38■□□□□ 0.37
CHMP4A-201ENST00000347519 HPGDP15428 266 aa17.38■□□□□ 0.37
CHMP4A-201ENST00000347519 CYB561P49447 251 aa17.38■□□□□ 0.37
CHMP4A-201ENST00000347519 UCNP55089 124 aa17.38■□□□□ 0.37
CHMP4A-201ENST00000347519 CXADRP78310 365 aa17.38■□□□□ 0.37
CHMP4A-201ENST00000347519 VLDLRP98155 873 aa17.38■□□□□ 0.37
CHMP4A-201ENST00000347519 HOXC5Q00444 222 aa17.38■□□□□ 0.37
CHMP4A-201ENST00000347519 INPP5JQ15735 1006 aaPredicted RBP17.38■□□□□ 0.37
CHMP4A-201ENST00000347519 TBR1Q16650 682 aa17.38■□□□□ 0.37
CHMP4A-201ENST00000347519 SPINK14Q6IE38 97 aa17.38■□□□□ 0.37
CHMP4A-201ENST00000347519 TSPYL5Q86VY4 417 aaPredicted RBP17.38■□□□□ 0.37
CHMP4A-201ENST00000347519 GPALPP1Q8IXQ4 340 aa17.38■□□□□ 0.37
CHMP4A-201ENST00000347519 DND1Q8IYX4 353 aaKnown RBP17.38■□□□□ 0.37
CHMP4A-201ENST00000347519 ZNF527Q8NB42 609 aa17.38■□□□□ 0.37
CHMP4A-201ENST00000347519 GOLM1Q8NBJ4 401 aa17.38■□□□□ 0.37
CHMP4A-201ENST00000347519 PHOSPHO1Q8TCT1 267 aa17.38■□□□□ 0.37
CHMP4A-201ENST00000347519 RASSF5Q8WWW0 418 aa17.38■□□□□ 0.37
CHMP4A-201ENST00000347519 LZICQ8WZA0 190 aa17.38■□□□□ 0.37
CHMP4A-201ENST00000347519 UTP23Q9BRU9 249 aaKnown RBP17.38■□□□□ 0.37
CHMP4A-201ENST00000347519 UGT2B28Q9BY64 529 aa17.38■□□□□ 0.37
CHMP4A-201ENST00000347519 HES7Q9BYE0 225 aa17.38■□□□□ 0.37
CHMP4A-201ENST00000347519 TBL1XR1Q9BZK7 514 aa17.38■□□□□ 0.37
CHMP4A-201ENST00000347519 AMBRA1Q9C0C7 1298 aa17.38■□□□□ 0.37
CHMP4A-201ENST00000347519 CACYBPQ9HB71 228 aaKnown RBP17.38■□□□□ 0.37
CHMP4A-201ENST00000347519 LRFN1Q9P244 771 aa17.38■□□□□ 0.37
CHMP4A-201ENST00000347519 ABI3Q9P2A4 366 aa17.38■□□□□ 0.37
CHMP4A-201ENST00000347519 ABCG2Q9UNQ0 655 aa17.38■□□□□ 0.37
CHMP4A-201ENST00000347519 NTNG1Q9Y2I2 539 aa17.38■□□□□ 0.37
CHMP4A-201ENST00000347519 CSAG2Q9Y5P2 127 aa17.38■□□□□ 0.37
CHMP4A-201ENST00000347519 hCG_2039718K7EN88 272 aa17.37■□□□□ 0.37
CHMP4A-201ENST00000347519 SEMA7AO75326 666 aa17.37■□□□□ 0.37
CHMP4A-201ENST00000347519 CSTAP01040 98 aa17.37■□□□□ 0.37
CHMP4A-201ENST00000347519 UBTFL6P0CB48 400 aaPredicted RBP17.37■□□□□ 0.37
CHMP4A-201ENST00000347519 SLC7A1P30825 629 aa17.37■□□□□ 0.37
CHMP4A-201ENST00000347519 ADH7P40394 386 aa17.37■□□□□ 0.37
CHMP4A-201ENST00000347519 ZNF136P52737 540 aa17.37■□□□□ 0.37
CHMP4A-201ENST00000347519 CBLN3Q6UW01 205 aa17.37■□□□□ 0.37
CHMP4A-201ENST00000347519 IGFL2Q6UWQ7 119 aa17.37■□□□□ 0.37
CHMP4A-201ENST00000347519 PAPD5Q8NDF8 572 aaKnown RBP17.37■□□□□ 0.37
CHMP4A-201ENST00000347519 CATSPER1Q8NEC5 780 aa17.37■□□□□ 0.37
CHMP4A-201ENST00000347519 FAM71CQ8NEG0 241 aa17.37■□□□□ 0.37
CHMP4A-201ENST00000347519 OR6T1Q8NGN1 323 aa17.37■□□□□ 0.37
CHMP4A-201ENST00000347519 OIT3Q8WWZ8 545 aa17.37■□□□□ 0.37
CHMP4A-201ENST00000347519 PROX1Q92786 737 aa17.37■□□□□ 0.37
CHMP4A-201ENST00000347519 SGCZQ96LD1 299 aa17.37■□□□□ 0.37
CHMP4A-201ENST00000347519 MAGIXQ9H6Y5 334 aa17.37■□□□□ 0.37
CHMP4A-201ENST00000347519 METTL7AQ9H8H3 244 aa17.37■□□□□ 0.37
CHMP4A-201ENST00000347519 S100A14Q9HCY8 104 aa17.37■□□□□ 0.37
CHMP4A-201ENST00000347519 CARD8Q9Y2G2 431 aa17.37■□□□□ 0.37
CHMP4A-201ENST00000347519 H0YHG0 523 aa17.36■□□□□ 0.37
CHMP4A-201ENST00000347519 NDUFB5O43674 189 aa17.36■□□□□ 0.37
CHMP4A-201ENST00000347519 FKBP6O75344 327 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms