RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 DNAJB12Q9NXW2 375 aaKnown RBP10.11□□□□□ -0.79
ECM1-201ENST00000346569 FOXJ2Q9P0K8 574 aa10.11□□□□□ -0.79
ECM1-201ENST00000346569 MRTO4Q9UKD2 239 aaKnown RBP10.11□□□□□ -0.79
ECM1-201ENST00000346569 FARSAQ9Y285 508 aaKnown RBP10.11□□□□□ -0.79
ECM1-201ENST00000346569 HS3ST3B1Q9Y662 390 aa10.11□□□□□ -0.79
ECM1-201ENST00000346569 NCOR2Q9Y618 2525 aa10.1□□□□□ -0.79
ECM1-201ENST00000346569 A0A087WUU8 490 aa10.1□□□□□ -0.79
ECM1-201ENST00000346569 IGHV1-45A0A0A0MS14 117 aa10.1□□□□□ -0.79
ECM1-201ENST00000346569 SPAARA0A1B0GVQ0 90 aa10.1□□□□□ -0.79
ECM1-201ENST00000346569 CDC14CA4D256 554 aa10.1□□□□□ -0.79
ECM1-201ENST00000346569 SERINC4A6NH21 518 aa10.1□□□□□ -0.79
ECM1-201ENST00000346569 FAAHO00519 579 aa10.1□□□□□ -0.79
ECM1-201ENST00000346569 AP3D1O14617 1153 aa10.1□□□□□ -0.79
ECM1-201ENST00000346569 TERTO14746 1132 aaKnown RBP10.1□□□□□ -0.79
ECM1-201ENST00000346569 ZNF354AO60765 605 aaPredicted RBP10.1□□□□□ -0.79
ECM1-201ENST00000346569 ADAM11O75078 769 aa10.1□□□□□ -0.79
ECM1-201ENST00000346569 REM1O75628 298 aa10.1□□□□□ -0.79
ECM1-201ENST00000346569 OR5F1O95221 314 aa10.1□□□□□ -0.79
ECM1-201ENST00000346569 LYPD3O95274 346 aa10.1□□□□□ -0.79
ECM1-201ENST00000346569 IGHEP01854 428 aa10.1□□□□□ -0.79
ECM1-201ENST00000346569 GNAO1P09471 354 aa10.1□□□□□ -0.79
ECM1-201ENST00000346569 GKN3PP0CG01 181 aa10.1□□□□□ -0.79
ECM1-201ENST00000346569 TCN2P20062 427 aa10.1□□□□□ -0.79
ECM1-201ENST00000346569 MMP11P24347 488 aa10.1□□□□□ -0.79
ECM1-201ENST00000346569 IGFBP5P24593 272 aa10.1□□□□□ -0.79
ECM1-201ENST00000346569 PSPHP78330 225 aa10.1□□□□□ -0.79
ECM1-201ENST00000346569 ST3GAL3Q11203 375 aa10.1□□□□□ -0.79
ECM1-201ENST00000346569 SSPNQ14714 243 aa10.1□□□□□ -0.79
ECM1-201ENST00000346569 TMEM164Q5U3C3 297 aa10.1□□□□□ -0.79
ECM1-201ENST00000346569 DESI1Q6ICB0 168 aa10.1□□□□□ -0.79
ECM1-201ENST00000346569 PODNL1Q6PEZ8 512 aa10.1□□□□□ -0.79
ECM1-201ENST00000346569 KIRREL2Q6UWL6 708 aa10.1□□□□□ -0.79
ECM1-201ENST00000346569 TMPRSS12Q86WS5 348 aa10.1□□□□□ -0.79
ECM1-201ENST00000346569 ATG16L2Q8NAA4 619 aa10.1□□□□□ -0.79
ECM1-201ENST00000346569 OR9Q2Q8NGE9 314 aa10.1□□□□□ -0.79
ECM1-201ENST00000346569 ADAMTS16Q8TE57 1224 aa10.1□□□□□ -0.79
ECM1-201ENST00000346569 CYGBQ8WWM9 190 aa10.1□□□□□ -0.79
ECM1-201ENST00000346569 GAL3ST4Q96RP7 486 aa10.1□□□□□ -0.79
ECM1-201ENST00000346569 ADOQ96SZ5 270 aa10.1□□□□□ -0.79
ECM1-201ENST00000346569 NIPSNAP1Q9BPW8 284 aa10.1□□□□□ -0.79
ECM1-201ENST00000346569 FAM117AQ9C073 453 aa10.1□□□□□ -0.79
ECM1-201ENST00000346569 GRIP2Q9C0E4 1043 aa10.1□□□□□ -0.79
ECM1-201ENST00000346569 LIN28AQ9H9Z2 209 aaKnown RBP10.1□□□□□ -0.79
ECM1-201ENST00000346569 CTPS2Q9NRF8 586 aa10.1□□□□□ -0.79
ECM1-201ENST00000346569 FLRT3Q9NZU0 649 aa10.1□□□□□ -0.79
ECM1-201ENST00000346569 TCFL5Q9UL49 500 aa10.1□□□□□ -0.79
ECM1-201ENST00000346569 TMCC3Q9ULS5 477 aa10.1□□□□□ -0.79
ECM1-201ENST00000346569 NTNG1Q9Y2I2 539 aa10.1□□□□□ -0.79
ECM1-201ENST00000346569 LOC100130705A0A1B0GUX0 176 aa10.09□□□□□ -0.79
ECM1-201ENST00000346569 CPSF4LA6NMK7 179 aaKnown RBP10.09□□□□□ -0.79
ECM1-201ENST00000346569 SOCS6O14544 535 aa10.09□□□□□ -0.79
ECM1-201ENST00000346569 ABCB7O75027 752 aa10.09□□□□□ -0.79
ECM1-201ENST00000346569 ZFAND5O76080 213 aa10.09□□□□□ -0.79
ECM1-201ENST00000346569 UTS2O95399 124 aa10.09□□□□□ -0.79
ECM1-201ENST00000346569 NADKO95544 446 aaPredicted RBP10.09□□□□□ -0.79
ECM1-201ENST00000346569 NGFRP08138 427 aa10.09□□□□□ -0.79
ECM1-201ENST00000346569 ITGAMP11215 1152 aa10.09□□□□□ -0.79
ECM1-201ENST00000346569 COX6A1P12074 109 aa10.09□□□□□ -0.79
ECM1-201ENST00000346569 CYP4B1P13584 511 aa10.09□□□□□ -0.79
ECM1-201ENST00000346569 CEACAM1P13688 526 aa10.09□□□□□ -0.79
ECM1-201ENST00000346569 NAGAP17050 411 aa10.09□□□□□ -0.79
ECM1-201ENST00000346569 HTR2AP28223 471 aa10.09□□□□□ -0.79
ECM1-201ENST00000346569 ABCD3P28288 659 aa10.09□□□□□ -0.79
ECM1-201ENST00000346569 NPRL3Q12980 569 aa10.09□□□□□ -0.79
ECM1-201ENST00000346569 TRAM2Q15035 370 aa10.09□□□□□ -0.79
ECM1-201ENST00000346569 OR1Q1Q15612 314 aa10.09□□□□□ -0.79
ECM1-201ENST00000346569 C3orf38Q5JPI3 329 aa10.09□□□□□ -0.79
ECM1-201ENST00000346569 CD300LDQ6UXZ3 194 aa10.09□□□□□ -0.79
ECM1-201ENST00000346569 GDF7Q7Z4P5 450 aa10.09□□□□□ -0.79
ECM1-201ENST00000346569 ZER1Q7Z7L7 766 aa10.09□□□□□ -0.79
ECM1-201ENST00000346569 NKAIN4Q8IVV8 208 aa10.09□□□□□ -0.79
ECM1-201ENST00000346569 PRR22Q8IZ63 422 aa10.09□□□□□ -0.79
ECM1-201ENST00000346569 TAGAPQ8N103 731 aa10.09□□□□□ -0.79
ECM1-201ENST00000346569 LINC00471Q8N535 108 aa10.09□□□□□ -0.79
ECM1-201ENST00000346569 LSMEM1Q8N8F7 131 aa10.09□□□□□ -0.79
ECM1-201ENST00000346569 FAM71CQ8NEG0 241 aa10.09□□□□□ -0.79
ECM1-201ENST00000346569 TOR1AIP2Q8NFQ8 470 aa10.09□□□□□ -0.79
ECM1-201ENST00000346569 OR11G2Q8NGC1 345 aa10.09□□□□□ -0.79
ECM1-201ENST00000346569 OR5L2Q8NGL0 311 aa10.09□□□□□ -0.79
ECM1-201ENST00000346569 M1APQ8TC57 530 aa10.09□□□□□ -0.79
ECM1-201ENST00000346569 CT55Q8WUE5 264 aa10.09□□□□□ -0.79
ECM1-201ENST00000346569 NACC2Q96BF6 587 aa10.09□□□□□ -0.79
ECM1-201ENST00000346569 OMA1Q96E52 524 aa10.09□□□□□ -0.79
ECM1-201ENST00000346569 SLC41A3Q96GZ6 507 aa10.09□□□□□ -0.79
ECM1-201ENST00000346569 CNBD2Q96M20 576 aa10.09□□□□□ -0.79
ECM1-201ENST00000346569 MUS81Q96NY9 551 aa10.09□□□□□ -0.79
ECM1-201ENST00000346569 PRSS27Q9BQR3 290 aa10.09□□□□□ -0.79
ECM1-201ENST00000346569 DGCR6LQ9BY27 220 aa10.09□□□□□ -0.79
ECM1-201ENST00000346569 KRT84Q9NSB2 600 aa10.09□□□□□ -0.79
ECM1-201ENST00000346569 NDRG4Q9ULP0 352 aaKnown RBP10.09□□□□□ -0.79
ECM1-201ENST00000346569 MGAT4BQ9UQ53 548 aa10.09□□□□□ -0.79
ECM1-201ENST00000346569 SLC35A3Q9Y2D2 325 aa10.09□□□□□ -0.79
ECM1-201ENST00000346569 NPFFR2Q9Y5X5 522 aa10.09□□□□□ -0.79
ECM1-201ENST00000346569 A0A1W2PQD3 144 aa10.08□□□□□ -0.8
ECM1-201ENST00000346569 TRAPPC13A5PLN9 417 aa10.08□□□□□ -0.8
ECM1-201ENST00000346569 MAGEA13PA6NCF6 341 aa10.08□□□□□ -0.8
ECM1-201ENST00000346569 OR6C70A6NIJ9 312 aa10.08□□□□□ -0.8
ECM1-201ENST00000346569 ALG1L2C9J202 215 aa10.08□□□□□ -0.8
ECM1-201ENST00000346569 ADAM10O14672 748 aa10.08□□□□□ -0.8
ECM1-201ENST00000346569 FADS1O60427 444 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms