RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 NCF4Q15080 339 aa13.06□□□□□ -0.32
CDK5RAP1-202ENST00000346416 MOGQ16653 247 aa13.06□□□□□ -0.32
CDK5RAP1-202ENST00000346416 LYSMD4Q5XG99 296 aa13.06□□□□□ -0.32
CDK5RAP1-202ENST00000346416 SLC30A6Q6NXT4 461 aa13.06□□□□□ -0.32
CDK5RAP1-202ENST00000346416 ZNF620Q6ZNG0 422 aa13.06□□□□□ -0.32
CDK5RAP1-202ENST00000346416 D2HGDHQ8N465 521 aa13.06□□□□□ -0.32
CDK5RAP1-202ENST00000346416 ZNF615Q8N8J6 731 aa13.06□□□□□ -0.32
CDK5RAP1-202ENST00000346416 TMEM163Q8TC26 289 aa13.06□□□□□ -0.32
CDK5RAP1-202ENST00000346416 SLC38A2Q96QD8 506 aa13.06□□□□□ -0.32
CDK5RAP1-202ENST00000346416 KRCC1Q9NPI7 259 aaPredicted RBP13.06□□□□□ -0.32
CDK5RAP1-202ENST00000346416 TBC1D23Q9NUY8 699 aa13.06□□□□□ -0.32
CDK5RAP1-202ENST00000346416 GPR52Q9Y2T5 361 aa13.06□□□□□ -0.32
CDK5RAP1-202ENST00000346416 MN1Q10571 1320 aaPredicted RBP13.05□□□□□ -0.32
CDK5RAP1-202ENST00000346416 C17orf105B2RV13 164 aa13.05□□□□□ -0.32
CDK5RAP1-202ENST00000346416 RGS6P49758 472 aa13.05□□□□□ -0.32
CDK5RAP1-202ENST00000346416 RGS19P49795 217 aa13.05□□□□□ -0.32
CDK5RAP1-202ENST00000346416 SLCO6A1Q86UG4 719 aa13.05□□□□□ -0.32
CDK5RAP1-202ENST00000346416 GRAMD2AQ8IUY3 354 aa13.05□□□□□ -0.32
CDK5RAP1-202ENST00000346416 TMEM239Q8WW34 195 aa13.05□□□□□ -0.32
CDK5RAP1-202ENST00000346416 MVB12AQ96EY5 273 aa13.05□□□□□ -0.32
CDK5RAP1-202ENST00000346416 SLC41A2Q96JW4 573 aa13.05□□□□□ -0.32
CDK5RAP1-202ENST00000346416 MGLLQ99685 303 aa13.05□□□□□ -0.32
CDK5RAP1-202ENST00000346416 PELOQ9BRX2 385 aaKnown RBP13.05□□□□□ -0.32
CDK5RAP1-202ENST00000346416 G6PC3Q9BUM1 346 aa13.05□□□□□ -0.32
CDK5RAP1-202ENST00000346416 ENAMQ9NRM1 1142 aa13.05□□□□□ -0.32
CDK5RAP1-202ENST00000346416 SEMA5BQ9P283 1151 aa13.05□□□□□ -0.32
CDK5RAP1-202ENST00000346416 IL20RAQ9UHF4 553 aa13.05□□□□□ -0.32
CDK5RAP1-202ENST00000346416 CLEC2DQ9UHP7 191 aa13.05□□□□□ -0.32
CDK5RAP1-202ENST00000346416 GMEB2Q9UKD1 530 aa13.05□□□□□ -0.32
CDK5RAP1-202ENST00000346416 OR10H1Q9Y4A9 318 aa13.05□□□□□ -0.32
CDK5RAP1-202ENST00000346416 ADAM11O75078 769 aa13.04□□□□□ -0.32
CDK5RAP1-202ENST00000346416 CH25HO95992 272 aa13.04□□□□□ -0.32
CDK5RAP1-202ENST00000346416 CLPSP04118 112 aa13.04□□□□□ -0.32
CDK5RAP1-202ENST00000346416 CSTF2P33240 577 aaKnown RBP eCLIP13.04□□□□□ -0.32
CDK5RAP1-202ENST00000346416 GALNSP34059 522 aa13.04□□□□□ -0.32
CDK5RAP1-202ENST00000346416 CLK1P49759 484 aaKnown RBP13.04□□□□□ -0.32
CDK5RAP1-202ENST00000346416 BMXP51813 675 aa13.04□□□□□ -0.32
CDK5RAP1-202ENST00000346416 BIKQ13323 160 aa13.04□□□□□ -0.32
CDK5RAP1-202ENST00000346416 DOC2BQ14184 412 aa13.04□□□□□ -0.32
CDK5RAP1-202ENST00000346416 GPR135Q8IZ08 494 aa13.04□□□□□ -0.32
CDK5RAP1-202ENST00000346416 RNF113BQ8IZP6 322 aaKnown RBP13.04□□□□□ -0.32
CDK5RAP1-202ENST00000346416 SLC34A3Q8N130 599 aa13.04□□□□□ -0.32
CDK5RAP1-202ENST00000346416 OR4Q3Q8NH05 313 aa13.04□□□□□ -0.32
CDK5RAP1-202ENST00000346416 PFN4Q8NHR9 129 aa13.04□□□□□ -0.32
CDK5RAP1-202ENST00000346416 DYNC2LI1Q8TCX1 351 aa13.04□□□□□ -0.32
CDK5RAP1-202ENST00000346416 ZNF559Q9BR84 538 aa13.04□□□□□ -0.32
CDK5RAP1-202ENST00000346416 IER2Q9BTL4 223 aa13.04□□□□□ -0.32
CDK5RAP1-202ENST00000346416 PRRG3Q9BZD7 231 aa13.04□□□□□ -0.32
CDK5RAP1-202ENST00000346416 DPH1Q9BZG8 443 aa13.04□□□□□ -0.32
CDK5RAP1-202ENST00000346416 TMEM27Q9HBJ8 222 aa13.04□□□□□ -0.32
CDK5RAP1-202ENST00000346416 C20orf141Q9NUB4 165 aa13.04□□□□□ -0.32
CDK5RAP1-202ENST00000346416 C14orf105Q9NVL8 296 aa13.04□□□□□ -0.32
CDK5RAP1-202ENST00000346416 DNAJB12Q9NXW2 375 aaKnown RBP13.04□□□□□ -0.32
CDK5RAP1-202ENST00000346416 ZNF223Q9UK11 482 aaPredicted RBP13.04□□□□□ -0.32
CDK5RAP1-202ENST00000346416 CBLCQ9ULV8 474 aa13.04□□□□□ -0.32
CDK5RAP1-202ENST00000346416 ERGIC3Q9Y282 383 aa13.04□□□□□ -0.32
CDK5RAP1-202ENST00000346416 CDH10Q9Y6N8 788 aa13.04□□□□□ -0.32
CDK5RAP1-202ENST00000346416 ANKRD33BA6NCL7 494 aa13.04□□□□□ -0.32
CDK5RAP1-202ENST00000346416 NPIPB9F8W1W9 429 aa13.04□□□□□ -0.32
CDK5RAP1-202ENST00000346416 KPNA4O00629 521 aaPredicted RBP13.04□□□□□ -0.32
CDK5RAP1-202ENST00000346416 CKMT1AP12532 417 aa13.04□□□□□ -0.32
CDK5RAP1-202ENST00000346416 GRK5P34947 590 aa13.04□□□□□ -0.32
CDK5RAP1-202ENST00000346416 ZNF141Q15928 474 aa13.04□□□□□ -0.32
CDK5RAP1-202ENST00000346416 MINDY4Q4G0A6 757 aa13.04□□□□□ -0.32
CDK5RAP1-202ENST00000346416 ZNF613Q6PF04 617 aa13.04□□□□□ -0.32
CDK5RAP1-202ENST00000346416 WDR74Q6RFH5 385 aaPredicted RBP13.04□□□□□ -0.32
CDK5RAP1-202ENST00000346416 MAMSTRQ6ZN01 415 aa13.04□□□□□ -0.32
CDK5RAP1-202ENST00000346416 GATAD2AQ86YP4 633 aa13.04□□□□□ -0.32
CDK5RAP1-202ENST00000346416 BCORP1Q8N888 145 aa13.04□□□□□ -0.32
CDK5RAP1-202ENST00000346416 GRHL3Q8TE85 626 aa13.04□□□□□ -0.32
CDK5RAP1-202ENST00000346416 PTPMT1Q8WUK0 201 aaPredicted RBP13.04□□□□□ -0.32
CDK5RAP1-202ENST00000346416 ZHX1-C8orf76Q96EF9 292 aa13.04□□□□□ -0.32
CDK5RAP1-202ENST00000346416 SENP5Q96HI0 755 aaPredicted RBP13.04□□□□□ -0.32
CDK5RAP1-202ENST00000346416 OR1F2PQ96R84 312 aa13.04□□□□□ -0.32
CDK5RAP1-202ENST00000346416 PHOX2BQ99453 314 aa13.04□□□□□ -0.32
CDK5RAP1-202ENST00000346416 NUDT22Q9BRQ3 303 aa13.04□□□□□ -0.32
CDK5RAP1-202ENST00000346416 NDC1Q9BTX1 674 aa13.04□□□□□ -0.32
CDK5RAP1-202ENST00000346416 EVA1AQ9H8M9 152 aa13.04□□□□□ -0.32
CDK5RAP1-202ENST00000346416 ATP13A2Q9NQ11 1180 aa13.04□□□□□ -0.32
CDK5RAP1-202ENST00000346416 PNO1Q9NRX1 252 aaKnown RBP13.04□□□□□ -0.32
CDK5RAP1-202ENST00000346416 MMACHCQ9Y4U1 282 aa13.04□□□□□ -0.32
CDK5RAP1-202ENST00000346416 CCDC163A0A0D9SF12 145 aa13.03□□□□□ -0.32
CDK5RAP1-202ENST00000346416 PRODHO43272 600 aa13.03□□□□□ -0.32
CDK5RAP1-202ENST00000346416 NADKO95544 446 aaPredicted RBP13.03□□□□□ -0.32
CDK5RAP1-202ENST00000346416 PDGFBP01127 241 aaPredicted RBP13.03□□□□□ -0.32
CDK5RAP1-202ENST00000346416 RPLP0P05388 317 aaKnown RBP13.03□□□□□ -0.32
CDK5RAP1-202ENST00000346416 IFI30P13284 250 aa13.03□□□□□ -0.32
CDK5RAP1-202ENST00000346416 FUT1P19526 365 aa13.03□□□□□ -0.32
CDK5RAP1-202ENST00000346416 MAKP20794 623 aa13.03□□□□□ -0.32
CDK5RAP1-202ENST00000346416 HOXA6P31267 233 aa13.03□□□□□ -0.32
CDK5RAP1-202ENST00000346416 ACAA2P42765 397 aaKnown RBP13.03□□□□□ -0.32
CDK5RAP1-202ENST00000346416 GCGRP47871 477 aa13.03□□□□□ -0.32
CDK5RAP1-202ENST00000346416 ATP12AP54707 1039 aa13.03□□□□□ -0.32
CDK5RAP1-202ENST00000346416 RHAGQ02094 409 aa13.03□□□□□ -0.32
CDK5RAP1-202ENST00000346416 ZNF829Q3KNS6 432 aaPredicted RBP13.03□□□□□ -0.32
CDK5RAP1-202ENST00000346416 PRSS42Q7Z5A4 293 aa13.03□□□□□ -0.32
CDK5RAP1-202ENST00000346416 CLDN22Q8N7P3 220 aa13.03□□□□□ -0.32
CDK5RAP1-202ENST00000346416 ANKK1Q8NFD2 765 aa13.03□□□□□ -0.32
CDK5RAP1-202ENST00000346416 TSLPQ969D9 159 aa13.03□□□□□ -0.32
CDK5RAP1-202ENST00000346416 CCDC74AQ96AQ1 378 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms