RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 KDM4EB2RXH2 506 aaPredicted RBP7.62□□□□□ -1.19
ATG4A-201ENST00000343524 J3KTA2 159 aa7.62□□□□□ -1.19
ATG4A-201ENST00000343524 RNF13O43567 381 aa7.62□□□□□ -1.19
ATG4A-201ENST00000343524 SPDEFO95238 335 aa7.62□□□□□ -1.19
ATG4A-201ENST00000343524 LIMS3P0CW19 117 aa7.62□□□□□ -1.19
ATG4A-201ENST00000343524 LIMS4P0CW20 117 aa7.62□□□□□ -1.19
ATG4A-201ENST00000343524 CD8BP10966 210 aa7.62□□□□□ -1.19
ATG4A-201ENST00000343524 TNFRSF1BP20333 461 aa7.62□□□□□ -1.19
ATG4A-201ENST00000343524 FAUP35544 74 aaKnown RBP7.62□□□□□ -1.19
ATG4A-201ENST00000343524 MAPK9P45984 424 aa7.62□□□□□ -1.19
ATG4A-201ENST00000343524 HCCSP53701 268 aa7.62□□□□□ -1.19
ATG4A-201ENST00000343524 CDH4P55283 916 aa7.62□□□□□ -1.19
ATG4A-201ENST00000343524 PCBP3P57721 371 aaKnown RBP7.62□□□□□ -1.19
ATG4A-201ENST00000343524 YBEYP58557 167 aaPredicted RBP7.62□□□□□ -1.19
ATG4A-201ENST00000343524 TAS2R43P59537 309 aa7.62□□□□□ -1.19
ATG4A-201ENST00000343524 RAB2AP61019 212 aa7.62□□□□□ -1.19
ATG4A-201ENST00000343524 CACNG1Q06432 222 aa7.62□□□□□ -1.19
ATG4A-201ENST00000343524 SLC3A1Q07837 685 aa7.62□□□□□ -1.19
ATG4A-201ENST00000343524 PDZK1IP1Q13113 114 aa7.62□□□□□ -1.19
ATG4A-201ENST00000343524 SERTAD2Q14140 314 aa7.62□□□□□ -1.19
ATG4A-201ENST00000343524 ZNF345Q14585 488 aa7.62□□□□□ -1.19
ATG4A-201ENST00000343524 PEA15Q15121 130 aa7.62□□□□□ -1.19
ATG4A-201ENST00000343524 MAPK14Q16539 360 aa7.62□□□□□ -1.19
ATG4A-201ENST00000343524 CPSF6Q16630 551 aaKnown RBP eCLIP7.62□□□□□ -1.19
ATG4A-201ENST00000343524 UAP1L1Q3KQV9 507 aa7.62□□□□□ -1.19
ATG4A-201ENST00000343524 OLFML2AQ68BL7 652 aa7.62□□□□□ -1.19
ATG4A-201ENST00000343524 PGBD2Q6P3X8 592 aa7.62□□□□□ -1.19
ATG4A-201ENST00000343524 Q6ZTK2 550 aa7.62□□□□□ -1.19
ATG4A-201ENST00000343524 SSX9Q7RTT3 188 aa7.62□□□□□ -1.19
ATG4A-201ENST00000343524 SERINC5Q86VE9 423 aa7.62□□□□□ -1.19
ATG4A-201ENST00000343524 SERPINA12Q8IW75 414 aa7.62□□□□□ -1.19
ATG4A-201ENST00000343524 CLECL1Q8IZS7 167 aa7.62□□□□□ -1.19
ATG4A-201ENST00000343524 HDDC3Q8N4P3 179 aa7.62□□□□□ -1.19
ATG4A-201ENST00000343524 TMEM185AQ8NFB2 350 aa7.62□□□□□ -1.19
ATG4A-201ENST00000343524 OR11G2Q8NGC1 345 aa7.62□□□□□ -1.19
ATG4A-201ENST00000343524 GOT1L1Q8NHS2 421 aaPredicted RBP7.62□□□□□ -1.19
ATG4A-201ENST00000343524 NFKBIDQ8NI38 313 aa7.62□□□□□ -1.19
ATG4A-201ENST00000343524 SLC7A13Q8TCU3 470 aa7.62□□□□□ -1.19
ATG4A-201ENST00000343524 C2CD4CQ8TF44 421 aa7.62□□□□□ -1.19
ATG4A-201ENST00000343524 TRAPPC12Q8WVT3 735 aa7.62□□□□□ -1.19
ATG4A-201ENST00000343524 MAL2Q969L2 176 aa7.62□□□□□ -1.19
ATG4A-201ENST00000343524 EXOSC8Q96B26 276 aaKnown RBP7.62□□□□□ -1.19
ATG4A-201ENST00000343524 ZC3H10Q96K80 434 aaKnown RBP7.62□□□□□ -1.19
ATG4A-201ENST00000343524 KLHL5Q96PQ7 755 aa7.62□□□□□ -1.19
ATG4A-201ENST00000343524 SEC11CQ9BY50 192 aa7.62□□□□□ -1.19
ATG4A-201ENST00000343524 BHLHE41Q9C0J9 482 aaPredicted RBP7.62□□□□□ -1.19
ATG4A-201ENST00000343524 MFFQ9GZY8 342 aa7.62□□□□□ -1.19
ATG4A-201ENST00000343524 ALX4Q9H161 411 aaPredicted RBP7.62□□□□□ -1.19
ATG4A-201ENST00000343524 BARX1Q9HBU1 254 aaPredicted RBP7.62□□□□□ -1.19
ATG4A-201ENST00000343524 CSNK1G1Q9HCP0 422 aa7.62□□□□□ -1.19
ATG4A-201ENST00000343524 ASH2LQ9UBL3 628 aa7.62□□□□□ -1.19
ATG4A-201ENST00000343524 ST3GAL5Q9UNP4 418 aa7.62□□□□□ -1.19
ATG4A-201ENST00000343524 RASD1Q9Y272 281 aa7.62□□□□□ -1.19
ATG4A-201ENST00000343524 A0A1B0GWJ7 208 aa7.61□□□□□ -1.19
ATG4A-201ENST00000343524 GPR31O00270 319 aa7.61□□□□□ -1.19
ATG4A-201ENST00000343524 MAN2B1O00754 1011 aa7.61□□□□□ -1.19
ATG4A-201ENST00000343524 ARPC1BO15143 372 aaKnown RBP7.61□□□□□ -1.19
ATG4A-201ENST00000343524 PCDH7O60245 1069 aa7.61□□□□□ -1.19
ATG4A-201ENST00000343524 UGDHO60701 494 aa7.61□□□□□ -1.19
ATG4A-201ENST00000343524 NME6O75414 186 aaPredicted RBP7.61□□□□□ -1.19
ATG4A-201ENST00000343524 CLN5O75503 358 aa7.61□□□□□ -1.19
ATG4A-201ENST00000343524 B3GALT4O96024 378 aa7.61□□□□□ -1.19
ATG4A-201ENST00000343524 IFNA10P01566 189 aa7.61□□□□□ -1.19
ATG4A-201ENST00000343524 WNT1P04628 370 aa7.61□□□□□ -1.19
ATG4A-201ENST00000343524 C1SP09871 688 aa7.61□□□□□ -1.19
ATG4A-201ENST00000343524 ALPIP09923 528 aa7.61□□□□□ -1.19
ATG4A-201ENST00000343524 ARAFP10398 606 aa7.61□□□□□ -1.19
ATG4A-201ENST00000343524 KCNE1P15382 129 aa7.61□□□□□ -1.19
ATG4A-201ENST00000343524 THBS2P35442 1172 aa7.61□□□□□ -1.19
ATG4A-201ENST00000343524 GDNFP39905 211 aa7.61□□□□□ -1.19
ATG4A-201ENST00000343524 P2RY4P51582 365 aa7.61□□□□□ -1.19
ATG4A-201ENST00000343524 GAS1P54826 345 aa7.61□□□□□ -1.19
ATG4A-201ENST00000343524 SPCS3P61009 180 aa7.61□□□□□ -1.19
ATG4A-201ENST00000343524 SNRPEP62304 92 aaKnown RBP7.61□□□□□ -1.19
ATG4A-201ENST00000343524 CXADRP78310 365 aa7.61□□□□□ -1.19
ATG4A-201ENST00000343524 BLOC1S1P78537 153 aa7.61□□□□□ -1.19
ATG4A-201ENST00000343524 FAM189BP81408 668 aa7.61□□□□□ -1.19
ATG4A-201ENST00000343524 CDC42EP1Q00587 391 aa7.61□□□□□ -1.19
ATG4A-201ENST00000343524 BCL2L1Q07817 233 aa7.61□□□□□ -1.19
ATG4A-201ENST00000343524 SSX2Q16385 188 aa7.61□□□□□ -1.19
ATG4A-201ENST00000343524 SGCAQ16586 387 aa7.61□□□□□ -1.19
ATG4A-201ENST00000343524 NKAPLQ5M9Q1 402 aa7.61□□□□□ -1.19
ATG4A-201ENST00000343524 FAM74A1Q5RGS3 127 aa7.61□□□□□ -1.19
ATG4A-201ENST00000343524 LYPLAL1Q5VWZ2 237 aa7.61□□□□□ -1.19
ATG4A-201ENST00000343524 FRG2Q64ET8 278 aa7.61□□□□□ -1.19
ATG4A-201ENST00000343524 PSAPL1Q6NUJ1 521 aa7.61□□□□□ -1.19
ATG4A-201ENST00000343524 TMEM88Q6PEY1 159 aa7.61□□□□□ -1.19
ATG4A-201ENST00000343524 ZNF783Q6ZMS7 281 aa7.61□□□□□ -1.19
ATG4A-201ENST00000343524 GPRIN1Q7Z2K8 1008 aa7.61□□□□□ -1.19
ATG4A-201ENST00000343524 CBLN2Q8IUK8 224 aa7.61□□□□□ -1.19
ATG4A-201ENST00000343524 NAGSQ8N159 534 aa7.61□□□□□ -1.19
ATG4A-201ENST00000343524 ZNF561Q8N587 486 aa7.61□□□□□ -1.19
ATG4A-201ENST00000343524 HAVCR2Q8TDQ0 301 aa7.61□□□□□ -1.19
ATG4A-201ENST00000343524 RXFP4Q8TDU9 374 aa7.61□□□□□ -1.19
ATG4A-201ENST00000343524 NR4A3Q92570 626 aa7.61□□□□□ -1.19
ATG4A-201ENST00000343524 APIPQ96GX9 242 aa7.61□□□□□ -1.19
ATG4A-201ENST00000343524 ZNF354BQ96LW1 612 aa7.61□□□□□ -1.19
ATG4A-201ENST00000343524 SPATA33Q96N06 139 aa7.61□□□□□ -1.19
ATG4A-201ENST00000343524 FRG2BQ96QU4 278 aa7.61□□□□□ -1.19
ATG4A-201ENST00000343524 OCSTAMPQ9BR26 566 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms