RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 ACOT11Q8WXI4 607 aaPredicted RBP17.24■□□□□ 0.35
HOXA9-201ENST00000343483 LMF2Q9BU23 707 aaKnown RBP17.24■□□□□ 0.35
HOXA9-201ENST00000343483 EGLN3Q9H6Z9 239 aa17.24■□□□□ 0.35
HOXA9-201ENST00000343483 ERVK-19Q9WJR5 959 aa17.24■□□□□ 0.35
HOXA9-201ENST00000343483 PCDHGA3Q9Y5H0 932 aa17.24■□□□□ 0.35
HOXA9-201ENST00000343483 CDHR4A6H8M9 788 aa17.24■□□□□ 0.35
HOXA9-201ENST00000343483 DBTP11182 482 aaKnown RBP17.24■□□□□ 0.35
HOXA9-201ENST00000343483 OR1D4P47884 311 aa17.24■□□□□ 0.35
HOXA9-201ENST00000343483 BNC1Q01954 994 aa17.24■□□□□ 0.35
HOXA9-201ENST00000343483 GINS1Q14691 196 aa17.24■□□□□ 0.35
HOXA9-201ENST00000343483 SHBQ15464 509 aa17.24■□□□□ 0.35
HOXA9-201ENST00000343483 ZNF404Q494X3 552 aa17.24■□□□□ 0.35
HOXA9-201ENST00000343483 KIF18BQ86Y91 864 aa17.24■□□□□ 0.35
HOXA9-201ENST00000343483 TCEANCQ8N8B7 351 aa17.24■□□□□ 0.35
HOXA9-201ENST00000343483 KBTBD8Q8NFY9 601 aa17.24■□□□□ 0.35
HOXA9-201ENST00000343483 OR8J1Q8NGP2 316 aa17.24■□□□□ 0.35
HOXA9-201ENST00000343483 HOXB13Q92826 284 aaPredicted RBP17.24■□□□□ 0.35
HOXA9-201ENST00000343483 VSTM2LQ96N03 204 aa17.24■□□□□ 0.35
HOXA9-201ENST00000343483 MGLLQ99685 303 aa17.24■□□□□ 0.35
HOXA9-201ENST00000343483 CHCHD6Q9BRQ6 235 aa17.24■□□□□ 0.35
HOXA9-201ENST00000343483 PLA2G12AQ9BZM1 189 aa17.24■□□□□ 0.35
HOXA9-201ENST00000343483 DSN1Q9H410 356 aa17.24■□□□□ 0.35
HOXA9-201ENST00000343483 KPNA4O00629 521 aaPredicted RBP17.23■□□□□ 0.35
HOXA9-201ENST00000343483 PRAMEF2O60811 474 aa17.23■□□□□ 0.35
HOXA9-201ENST00000343483 HNRNPCP07910 306 aaKnown RBP eCLIP17.23■□□□□ 0.35
HOXA9-201ENST00000343483 GNSP15586 552 aa17.23■□□□□ 0.35
HOXA9-201ENST00000343483 GPR3P46089 330 aa17.23■□□□□ 0.35
HOXA9-201ENST00000343483 GPLD1P80108 840 aa17.23■□□□□ 0.35
HOXA9-201ENST00000343483 NNATQ16517 81 aa17.23■□□□□ 0.35
HOXA9-201ENST00000343483 DECR1Q16698 335 aa17.23■□□□□ 0.35
HOXA9-201ENST00000343483 TSTQ16762 297 aaKnown RBP17.23■□□□□ 0.35
HOXA9-201ENST00000343483 SOWAHCQ53LP3 525 aaPredicted RBP17.23■□□□□ 0.35
HOXA9-201ENST00000343483 PRAMEF17Q5VTA0 474 aa17.23■□□□□ 0.35
HOXA9-201ENST00000343483 LSRQ86X29 649 aaPredicted RBP17.23■□□□□ 0.35
HOXA9-201ENST00000343483 NRMQ8IXM6 262 aa17.23■□□□□ 0.35
HOXA9-201ENST00000343483 RNF217Q8TC41 542 aa17.23■□□□□ 0.35
HOXA9-201ENST00000343483 IER2Q9BTL4 223 aa17.23■□□□□ 0.35
HOXA9-201ENST00000343483 MMP27Q9H306 513 aa17.23■□□□□ 0.35
HOXA9-201ENST00000343483 RNF167Q9H6Y7 350 aa17.23■□□□□ 0.35
HOXA9-201ENST00000343483 POLE3Q9NRF9 147 aa17.23■□□□□ 0.35
HOXA9-201ENST00000343483 DHCR7Q9UBM7 475 aaKnown RBP17.23■□□□□ 0.35
HOXA9-201ENST00000343483 DAPK2Q9UIK4 370 aa17.23■□□□□ 0.35
HOXA9-201ENST00000343483 SPEGQ15772 3267 aa17.22■□□□□ 0.35
HOXA9-201ENST00000343483 METTL15A6NJ78 407 aa17.22■□□□□ 0.35
HOXA9-201ENST00000343483 HTR2AP28223 471 aa17.22■□□□□ 0.35
HOXA9-201ENST00000343483 OMPP47874 163 aa17.22■□□□□ 0.35
HOXA9-201ENST00000343483 GIPRP48546 466 aa17.22■□□□□ 0.35
HOXA9-201ENST00000343483 TSPAN31Q12999 210 aa17.22■□□□□ 0.35
HOXA9-201ENST00000343483 TRIM16LQ309B1 348 aa17.22■□□□□ 0.35
HOXA9-201ENST00000343483 PERM1Q5SV97 790 aa17.22■□□□□ 0.35
HOXA9-201ENST00000343483 PDZK1Q5T2W1 519 aa17.22■□□□□ 0.35
HOXA9-201ENST00000343483 MFSD4BQ5TF39 518 aa17.22■□□□□ 0.35
HOXA9-201ENST00000343483 MEDAGQ5VYS4 303 aa17.22■□□□□ 0.35
HOXA9-201ENST00000343483 GATAD2AQ86YP4 633 aa17.22■□□□□ 0.35
HOXA9-201ENST00000343483 TEX47Q8TBZ9 253 aa17.22■□□□□ 0.35
HOXA9-201ENST00000343483 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.22■□□□□ 0.35
HOXA9-201ENST00000343483 ARSGQ96EG1 525 aa17.22■□□□□ 0.35
HOXA9-201ENST00000343483 RPL36Q9Y3U8 105 aaKnown RBP17.22■□□□□ 0.35
HOXA9-201ENST00000343483 MUC6Q6W4X9 2439 aa17.22■□□□□ 0.35
HOXA9-201ENST00000343483 H3BMH7 237 aa17.22■□□□□ 0.35
HOXA9-201ENST00000343483 PIP5K1CO60331 668 aa17.22■□□□□ 0.35
HOXA9-201ENST00000343483 SOX30O94993 753 aa17.22■□□□□ 0.35
HOXA9-201ENST00000343483 FOLR1P15328 257 aa17.22■□□□□ 0.35
HOXA9-201ENST00000343483 CSTF2P33240 577 aaKnown RBP eCLIP17.22■□□□□ 0.35
HOXA9-201ENST00000343483 GPR4P46093 362 aa17.22■□□□□ 0.35
HOXA9-201ENST00000343483 SMSP52788 366 aa17.22■□□□□ 0.35
HOXA9-201ENST00000343483 ACSM5Q6NUN0 579 aa17.22■□□□□ 0.35
HOXA9-201ENST00000343483 MBOAT2Q6ZWT7 520 aa17.22■□□□□ 0.35
HOXA9-201ENST00000343483 BCDIN3DQ7Z5W3 292 aaKnown RBP17.22■□□□□ 0.35
HOXA9-201ENST00000343483 SNX29P2Q8IUI4 249 aa17.22■□□□□ 0.35
HOXA9-201ENST00000343483 CARFQ8N187 725 aa17.22■□□□□ 0.35
HOXA9-201ENST00000343483 AMER2Q8N7J2 671 aa17.22■□□□□ 0.35
HOXA9-201ENST00000343483 OR1L3Q8NH93 324 aa17.22■□□□□ 0.35
HOXA9-201ENST00000343483 PMM1Q92871 262 aa17.22■□□□□ 0.35
HOXA9-201ENST00000343483 TMEM80Q96HE8 168 aa17.22■□□□□ 0.35
HOXA9-201ENST00000343483 CENPOQ9BU64 300 aa17.22■□□□□ 0.35
HOXA9-201ENST00000343483 TSSK6Q9BXA6 273 aa17.22■□□□□ 0.35
HOXA9-201ENST00000343483 TRAPPC13A5PLN9 417 aa17.21■□□□□ 0.35
HOXA9-201ENST00000343483 TLX2O43763 284 aaPredicted RBP17.21■□□□□ 0.35
HOXA9-201ENST00000343483 PRKYO43930 277 aa17.21■□□□□ 0.35
HOXA9-201ENST00000343483 IGKV1D-16P01601 117 aa17.21■□□□□ 0.35
HOXA9-201ENST00000343483 PCYT1AP49585 367 aa17.21■□□□□ 0.35
HOXA9-201ENST00000343483 ZNF91Q05481 1191 aa17.21■□□□□ 0.35
HOXA9-201ENST00000343483 OCLNQ16625 522 aa17.21■□□□□ 0.35
HOXA9-201ENST00000343483 NPSR1Q6W5P4 371 aa17.21■□□□□ 0.35
HOXA9-201ENST00000343483 GPR135Q8IZ08 494 aa17.21■□□□□ 0.35
HOXA9-201ENST00000343483 C16orf52Q8NHV5 167 aa17.21■□□□□ 0.35
HOXA9-201ENST00000343483 CCDC74AQ96AQ1 378 aa17.21■□□□□ 0.35
HOXA9-201ENST00000343483 PTCHD1Q96NR3 888 aa17.21■□□□□ 0.35
HOXA9-201ENST00000343483 NUDT22Q9BRQ3 303 aa17.21■□□□□ 0.35
HOXA9-201ENST00000343483 OR10A5Q9H207 317 aa17.21■□□□□ 0.35
HOXA9-201ENST00000343483 Q9N2J8 555 aa17.21■□□□□ 0.35
HOXA9-201ENST00000343483 GMEB2Q9UKD1 530 aa17.21■□□□□ 0.35
HOXA9-201ENST00000343483 PCDH15Q96QU1 1955 aa17.21■□□□□ 0.35
HOXA9-201ENST00000343483 MN1Q10571 1320 aaPredicted RBP17.21■□□□□ 0.34
HOXA9-201ENST00000343483 CCRL2O00421 344 aa17.2■□□□□ 0.34
HOXA9-201ENST00000343483 HYAL3O43820 417 aaPredicted RBP17.2■□□□□ 0.34
HOXA9-201ENST00000343483 CDK5Q00535 292 aa17.2■□□□□ 0.34
HOXA9-201ENST00000343483 IFITM3Q01628 133 aa17.2■□□□□ 0.34
HOXA9-201ENST00000343483 SERTAD2Q14140 314 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms