RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 CHMP24386 653 aa14.11□□□□□ -0.15
UBE3B-202ENST00000342494 PCGF2P35227 344 aa14.11□□□□□ -0.15
UBE3B-202ENST00000342494 ZNF81P51508 661 aa14.11□□□□□ -0.15
UBE3B-202ENST00000342494 IST1P53990 364 aa14.11□□□□□ -0.15
UBE3B-202ENST00000342494 COL28A1Q2UY09 1125 aa14.11□□□□□ -0.15
UBE3B-202ENST00000342494 SDR9C7Q8NEX9 313 aa14.11□□□□□ -0.15
UBE3B-202ENST00000342494 MAN2C1Q9NTJ4 1040 aa14.11□□□□□ -0.15
UBE3B-202ENST00000342494 B3GNT2Q9NY97 397 aa14.11□□□□□ -0.15
UBE3B-202ENST00000342494 MRPL15Q9P015 296 aaKnown RBP14.11□□□□□ -0.15
UBE3B-202ENST00000342494 KLHL9Q9P2J3 617 aa14.11□□□□□ -0.15
UBE3B-202ENST00000342494 A0A0A6YYH2 397 aa14.1□□□□□ -0.15
UBE3B-202ENST00000342494 FAM230AA0A1W2PPH8 454 aa14.1□□□□□ -0.15
UBE3B-202ENST00000342494 A6NJ64 397 aa14.1□□□□□ -0.15
UBE3B-202ENST00000342494 PCP4L1A6NKN8 68 aa14.1□□□□□ -0.15
UBE3B-202ENST00000342494 SLC1A7O00341 560 aa14.1□□□□□ -0.15
UBE3B-202ENST00000342494 C1SP09871 688 aa14.1□□□□□ -0.15
UBE3B-202ENST00000342494 PRDX1Q06830 199 aaKnown RBP14.1□□□□□ -0.15
UBE3B-202ENST00000342494 MBTPS1Q14703 1052 aa14.1□□□□□ -0.15
UBE3B-202ENST00000342494 OR9Q2Q8NGE9 314 aa14.1□□□□□ -0.15
UBE3B-202ENST00000342494 CDC6Q99741 560 aa14.1□□□□□ -0.15
UBE3B-202ENST00000342494 GSTO2Q9H4Y5 243 aa14.1□□□□□ -0.15
UBE3B-202ENST00000342494 OBP2BQ9NPH6 170 aa14.1□□□□□ -0.15
UBE3B-202ENST00000342494 CUEDC1Q9NWM3 386 aaPredicted RBP14.1□□□□□ -0.15
UBE3B-202ENST00000342494 C12orf71A8MTZ7 269 aa14.1□□□□□ -0.15
UBE3B-202ENST00000342494 IFNA1P01562 189 aa14.1□□□□□ -0.15
UBE3B-202ENST00000342494 AMY2AP04746 511 aa14.1□□□□□ -0.15
UBE3B-202ENST00000342494 FGF4P08620 206 aa14.1□□□□□ -0.15
UBE3B-202ENST00000342494 H2AFB2P0C5Z0 115 aa14.1□□□□□ -0.15
UBE3B-202ENST00000342494 RAB3AP20336 220 aa14.1□□□□□ -0.15
UBE3B-202ENST00000342494 MAP2K3P46734 347 aa14.1□□□□□ -0.15
UBE3B-202ENST00000342494 FXYD4P59646 89 aa14.1□□□□□ -0.15
UBE3B-202ENST00000342494 DCDP81605 110 aaKnown RBP14.1□□□□□ -0.15
UBE3B-202ENST00000342494 MOGSQ13724 837 aa14.1□□□□□ -0.15
UBE3B-202ENST00000342494 CCDC58Q4VC31 144 aa14.1□□□□□ -0.15
UBE3B-202ENST00000342494 CMTM1Q8IZ96 169 aa14.1□□□□□ -0.15
UBE3B-202ENST00000342494 CCDC71LQ8N9Z2 235 aa14.1□□□□□ -0.15
UBE3B-202ENST00000342494 OR14A16Q8NHC5 309 aa14.1□□□□□ -0.15
UBE3B-202ENST00000342494 FER1L6-AS2Q96M78 137 aa14.1□□□□□ -0.15
UBE3B-202ENST00000342494 BTBD2Q9BX70 525 aa14.1□□□□□ -0.15
UBE3B-202ENST00000342494 ABCG5Q9H222 651 aa14.1□□□□□ -0.15
UBE3B-202ENST00000342494 MYEF2Q9P2K5 600 aaKnown RBP14.1□□□□□ -0.15
UBE3B-202ENST00000342494 ADAMTS6Q9UKP5 1117 aa14.1□□□□□ -0.15
UBE3B-202ENST00000342494 DCDC2BA2VCK2 349 aa14.1□□□□□ -0.15
UBE3B-202ENST00000342494 SSX5O60225 188 aa14.1□□□□□ -0.15
UBE3B-202ENST00000342494 WDPCPO95876 746 aa14.1□□□□□ -0.15
UBE3B-202ENST00000342494 ATF4P18848 351 aaPredicted RBP14.1□□□□□ -0.15
UBE3B-202ENST00000342494 NPR2P20594 1047 aa14.1□□□□□ -0.15
UBE3B-202ENST00000342494 AOAHP28039 575 aa14.1□□□□□ -0.15
UBE3B-202ENST00000342494 RGRP47804 291 aa14.1□□□□□ -0.15
UBE3B-202ENST00000342494 ERVK-25P63136 954 aa14.1□□□□□ -0.15
UBE3B-202ENST00000342494 TP53I3Q53FA7 332 aa14.1□□□□□ -0.15
UBE3B-202ENST00000342494 HES5Q5TA89 166 aa14.1□□□□□ -0.15
UBE3B-202ENST00000342494 WDR53Q7Z5U6 358 aaPredicted RBP14.1□□□□□ -0.15
UBE3B-202ENST00000342494 OR2A12Q8NGT7 310 aa14.1□□□□□ -0.15
UBE3B-202ENST00000342494 SUN5Q8TC36 379 aa14.1□□□□□ -0.15
UBE3B-202ENST00000342494 ISOC1Q96CN7 298 aa14.1□□□□□ -0.15
UBE3B-202ENST00000342494 SLC6A16Q9GZN6 736 aa14.1□□□□□ -0.15
UBE3B-202ENST00000342494 ZBP1Q9H171 429 aa14.1□□□□□ -0.15
UBE3B-202ENST00000342494 B3GNT3Q9Y2A9 372 aa14.1□□□□□ -0.15
UBE3B-202ENST00000342494 B3GALT1Q9Y5Z6 326 aa14.1□□□□□ -0.15
UBE3B-202ENST00000342494 TRAV18A0A075B6X5 111 aa14.1□□□□□ -0.15
UBE3B-202ENST00000342494 LOC285095A0A1B0GVY8 99 aa14.1□□□□□ -0.15
UBE3B-202ENST00000342494 AHRP35869 848 aa14.1□□□□□ -0.15
UBE3B-202ENST00000342494 PBX2P40425 430 aa14.1□□□□□ -0.15
UBE3B-202ENST00000342494 PCBD1P61457 104 aa14.1□□□□□ -0.15
UBE3B-202ENST00000342494 SENP5Q96HI0 755 aaPredicted RBP14.1□□□□□ -0.15
UBE3B-202ENST00000342494 ULBP2Q9BZM5 246 aa14.1□□□□□ -0.15
UBE3B-202ENST00000342494 TAS2R8Q9NYW2 309 aa14.1□□□□□ -0.15
UBE3B-202ENST00000342494 LHX3Q9UBR4 397 aa14.1□□□□□ -0.15
UBE3B-202ENST00000342494 HSF5Q4G112 596 aaPredicted RBP14.1□□□□□ -0.15
UBE3B-202ENST00000342494 C9orf135Q5VTT2 229 aa14.1□□□□□ -0.15
UBE3B-202ENST00000342494 TSPYL5Q86VY4 417 aaPredicted RBP14.1□□□□□ -0.15
UBE3B-202ENST00000342494 OR5K2Q8NHB8 316 aa14.1□□□□□ -0.15
UBE3B-202ENST00000342494 SPPL3Q8TCT6 385 aa14.1□□□□□ -0.15
UBE3B-202ENST00000342494 TOMM40LQ969M1 308 aa14.1□□□□□ -0.15
UBE3B-202ENST00000342494 LGALS12Q96DT0 336 aa14.1□□□□□ -0.15
UBE3B-202ENST00000342494 INTS14Q96SY0 518 aa14.1□□□□□ -0.15
UBE3B-202ENST00000342494 SDR39U1Q9NRG7 319 aaPredicted RBP14.1□□□□□ -0.15
UBE3B-202ENST00000342494 GHRLQ9UBU3 117 aa14.1□□□□□ -0.15
UBE3B-202ENST00000342494 CCL26Q9Y258 94 aa14.1□□□□□ -0.15
UBE3B-202ENST00000342494 AKAP12Q02952 1782 aa14.09□□□□□ -0.15
UBE3B-202ENST00000342494 EEF1E1-BLOC1S5C9J1V9 151 aa14.09□□□□□ -0.15
UBE3B-202ENST00000342494 GPR39O43194 453 aa14.09□□□□□ -0.15
UBE3B-202ENST00000342494 RPS17P08708 135 aaKnown RBP14.09□□□□□ -0.15
UBE3B-202ENST00000342494 BMP1P13497 986 aa14.09□□□□□ -0.15
UBE3B-202ENST00000342494 CAPN3P20807 821 aa14.09□□□□□ -0.15
UBE3B-202ENST00000342494 ITGB8P26012 769 aa14.09□□□□□ -0.15
UBE3B-202ENST00000342494 RGS6P49758 472 aa14.09□□□□□ -0.15
UBE3B-202ENST00000342494 FOXA1P55317 472 aa14.09□□□□□ -0.15
UBE3B-202ENST00000342494 PTPRRQ15256 657 aa14.09□□□□□ -0.15
UBE3B-202ENST00000342494 SIX1Q15475 284 aaPredicted RBP14.09□□□□□ -0.15
UBE3B-202ENST00000342494 ZNF595Q8IYB9 648 aa14.09□□□□□ -0.15
UBE3B-202ENST00000342494 NTMT1Q9BV86 223 aa14.09□□□□□ -0.15
UBE3B-202ENST00000342494 ACPTQ9BZG2 426 aa14.09□□□□□ -0.15
UBE3B-202ENST00000342494 PLEKHJ1Q9NW61 149 aa14.09□□□□□ -0.15
UBE3B-202ENST00000342494 C14orf119Q9NWQ9 140 aa14.09□□□□□ -0.15
UBE3B-202ENST00000342494 VSX1Q9NZR4 365 aaPredicted RBP14.09□□□□□ -0.15
UBE3B-202ENST00000342494 CSNK1G3Q9Y6M4 447 aa14.09□□□□□ -0.15
UBE3B-202ENST00000342494 KCNK5O95279 499 aa14.09□□□□□ -0.15
UBE3B-202ENST00000342494 PTHP01270 115 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms