RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 ACOT11Q8WXI4 607 aaPredicted RBP13.43□□□□□ -0.26
CPSF7-201ENST00000340437 SLC6A17Q9H1V8 727 aa13.43□□□□□ -0.26
CPSF7-201ENST00000340437 APOBEC3BQ9UH17 382 aaKnown RBP13.43□□□□□ -0.26
CPSF7-201ENST00000340437 EFCAB14O75071 495 aa13.42□□□□□ -0.26
CPSF7-201ENST00000340437 SNRPBP14678 240 aaKnown RBP13.42□□□□□ -0.26
CPSF7-201ENST00000340437 GIFP27352 417 aa13.42□□□□□ -0.26
CPSF7-201ENST00000340437 RAB28P51157 221 aa13.42□□□□□ -0.26
CPSF7-201ENST00000340437 OR12D2P58182 307 aa13.42□□□□□ -0.26
CPSF7-201ENST00000340437 FAM209AQ5JX71 171 aa13.42□□□□□ -0.26
CPSF7-201ENST00000340437 ABHD17CQ6PCB6 329 aa13.42□□□□□ -0.26
CPSF7-201ENST00000340437 MRPL43Q8N983 215 aaKnown RBP13.42□□□□□ -0.26
CPSF7-201ENST00000340437 OR13C2Q8NGS9 318 aa13.42□□□□□ -0.26
CPSF7-201ENST00000340437 OR5W2Q8NH69 310 aa13.42□□□□□ -0.26
CPSF7-201ENST00000340437 FANK1Q8TC84 345 aa13.42□□□□□ -0.26
CPSF7-201ENST00000340437 DIO2Q92813 273 aa13.42□□□□□ -0.26
CPSF7-201ENST00000340437 FAM83CQ9BQN1 747 aa13.42□□□□□ -0.26
CPSF7-201ENST00000340437 SPRTNQ9H040 489 aaPredicted RBP13.42□□□□□ -0.26
CPSF7-201ENST00000340437 PCBD2Q9H0N5 130 aa13.42□□□□□ -0.26
CPSF7-201ENST00000340437 INSL6Q9Y581 213 aa13.42□□□□□ -0.26
CPSF7-201ENST00000340437 ZNF106Q9H2Y7 1883 aaKnown RBP13.42□□□□□ -0.26
CPSF7-201ENST00000340437 C1QTNF3-AMACRE9PGA6 284 aa13.42□□□□□ -0.26
CPSF7-201ENST00000340437 SSNA1O43805 119 aa13.42□□□□□ -0.26
CPSF7-201ENST00000340437 LDB3O75112 727 aa13.42□□□□□ -0.26
CPSF7-201ENST00000340437 THY1P04216 161 aa13.42□□□□□ -0.26
CPSF7-201ENST00000340437 HOXD11P31277 338 aaPredicted RBP13.42□□□□□ -0.26
CPSF7-201ENST00000340437 NAA10P41227 235 aaPredicted RBP13.42□□□□□ -0.26
CPSF7-201ENST00000340437 PUS10Q3MIT2 529 aaKnown RBP13.42□□□□□ -0.26
CPSF7-201ENST00000340437 AADACL4Q5VUY2 407 aa13.42□□□□□ -0.26
CPSF7-201ENST00000340437 YAF2Q8IY57 180 aa13.42□□□□□ -0.26
CPSF7-201ENST00000340437 LINC00471Q8N535 108 aa13.42□□□□□ -0.26
CPSF7-201ENST00000340437 OR7G2Q8NG99 324 aa13.42□□□□□ -0.26
CPSF7-201ENST00000340437 TRMT10AQ8TBZ6 339 aaKnown RBP13.42□□□□□ -0.26
CPSF7-201ENST00000340437 C4orf36Q96KX1 117 aa13.42□□□□□ -0.26
CPSF7-201ENST00000340437 WASH6PQ9NQA3 447 aa13.42□□□□□ -0.26
CPSF7-201ENST00000340437 BABAM2Q9NXR7 383 aa13.42□□□□□ -0.26
CPSF7-201ENST00000340437 STMN3Q9NZ72 180 aa13.42□□□□□ -0.26
CPSF7-201ENST00000340437 RGS9O75916 674 aaPredicted RBP13.42□□□□□ -0.26
CPSF7-201ENST00000340437 ZIC2O95409 532 aaPredicted RBP13.42□□□□□ -0.26
CPSF7-201ENST00000340437 POU3F3P20264 500 aaPredicted RBP13.42□□□□□ -0.26
CPSF7-201ENST00000340437 HLA-DMAP28067 261 aa13.42□□□□□ -0.26
CPSF7-201ENST00000340437 SGCGQ13326 291 aa13.42□□□□□ -0.26
CPSF7-201ENST00000340437 TP53I3Q53FA7 332 aa13.42□□□□□ -0.26
CPSF7-201ENST00000340437 NATD1Q8N6N6 113 aa13.42□□□□□ -0.26
CPSF7-201ENST00000340437 ZNF433Q8N7K0 673 aaPredicted RBP13.42□□□□□ -0.26
CPSF7-201ENST00000340437 ZNF671Q8TAW3 534 aa13.42□□□□□ -0.26
CPSF7-201ENST00000340437 GSDMCQ9BYG8 508 aa13.42□□□□□ -0.26
CPSF7-201ENST00000340437 SLC6A20Q9NP91 592 aa13.42□□□□□ -0.26
CPSF7-201ENST00000340437 BRD7Q9NPI1 651 aa13.42□□□□□ -0.26
CPSF7-201ENST00000340437 ASB4Q9Y574 426 aa13.42□□□□□ -0.26
CPSF7-201ENST00000340437 PCDHGB7Q9Y5F8 929 aa13.42□□□□□ -0.26
CPSF7-201ENST00000340437 KDM4EB2RXH2 506 aaPredicted RBP13.41□□□□□ -0.26
CPSF7-201ENST00000340437 PEX12O00623 359 aa13.41□□□□□ -0.26
CPSF7-201ENST00000340437 CLEC3AO75596 197 aa13.41□□□□□ -0.26
CPSF7-201ENST00000340437 ZNF888P0CJ79 500 aaPredicted RBP13.41□□□□□ -0.26
CPSF7-201ENST00000340437 LAMP2P13473 410 aa13.41□□□□□ -0.26
CPSF7-201ENST00000340437 TEAD1P28347 426 aa13.41□□□□□ -0.26
CPSF7-201ENST00000340437 GRPRP30550 384 aa13.41□□□□□ -0.26
CPSF7-201ENST00000340437 OR3A3P47888 321 aa13.41□□□□□ -0.26
CPSF7-201ENST00000340437 ATP12AP54707 1039 aa13.41□□□□□ -0.26
CPSF7-201ENST00000340437 POU4F3Q15319 338 aa13.41□□□□□ -0.26
CPSF7-201ENST00000340437 TRMT12Q53H54 448 aaKnown RBP13.41□□□□□ -0.26
CPSF7-201ENST00000340437 SFRP4Q6FHJ7 346 aaPredicted RBP13.41□□□□□ -0.26
CPSF7-201ENST00000340437 VITQ6UXI7 678 aa13.41□□□□□ -0.26
CPSF7-201ENST00000340437 SERPINA12Q8IW75 414 aa13.41□□□□□ -0.26
CPSF7-201ENST00000340437 OR14C36Q8NHC7 312 aa13.41□□□□□ -0.26
CPSF7-201ENST00000340437 DNAJA3Q96EY1 480 aa13.41□□□□□ -0.26
CPSF7-201ENST00000340437 ORAI3Q9BRQ5 295 aa13.41□□□□□ -0.26
CPSF7-201ENST00000340437 DPCDQ9BVM2 203 aaPredicted RBP13.41□□□□□ -0.26
CPSF7-201ENST00000340437 MKRN2Q9H000 416 aaKnown RBP13.41□□□□□ -0.26
CPSF7-201ENST00000340437 PRDM7Q9NQW5 492 aa13.41□□□□□ -0.26
CPSF7-201ENST00000340437 CA5BQ9Y2D0 317 aa13.41□□□□□ -0.26
CPSF7-201ENST00000340437 SNRNP200O75643 2136 aaKnown RBP13.41□□□□□ -0.26
CPSF7-201ENST00000340437 ICMTO60725 284 aa13.41□□□□□ -0.26
CPSF7-201ENST00000340437 MT-ND4P03905 459 aa13.41□□□□□ -0.26
CPSF7-201ENST00000340437 CLDN20P56880 219 aa13.41□□□□□ -0.26
CPSF7-201ENST00000340437 FGFBP1Q14512 234 aa13.41□□□□□ -0.26
CPSF7-201ENST00000340437 LYPD4Q6UWN0 246 aa13.41□□□□□ -0.26
CPSF7-201ENST00000340437 C17orf47Q8NEP4 570 aa13.41□□□□□ -0.26
CPSF7-201ENST00000340437 CCDC120Q96HB5 630 aa13.41□□□□□ -0.26
CPSF7-201ENST00000340437 LINC00615Q96LM1 132 aaPredicted RBP13.41□□□□□ -0.26
CPSF7-201ENST00000340437 ABHD1Q96SE0 405 aa13.41□□□□□ -0.26
CPSF7-201ENST00000340437 CD180Q99467 661 aa13.41□□□□□ -0.26
CPSF7-201ENST00000340437 DENND4CQ5VZ89 1909 aa13.41□□□□□ -0.26
CPSF7-201ENST00000340437 SLC9B1P1A6NJY1 282 aa13.41□□□□□ -0.26
CPSF7-201ENST00000340437 PROM1O43490 865 aa13.41□□□□□ -0.26
CPSF7-201ENST00000340437 OR5F1O95221 314 aa13.41□□□□□ -0.26
CPSF7-201ENST00000340437 CRYZL1O95825 349 aa13.41□□□□□ -0.26
CPSF7-201ENST00000340437 DHFRP00374 187 aa13.41□□□□□ -0.26
CPSF7-201ENST00000340437 MAKP20794 623 aa13.41□□□□□ -0.26
CPSF7-201ENST00000340437 AK4P27144 223 aaPredicted RBP13.41□□□□□ -0.26
CPSF7-201ENST00000340437 FGF9P31371 208 aaPredicted RBP13.41□□□□□ -0.26
CPSF7-201ENST00000340437 ACSL1P33121 698 aa13.41□□□□□ -0.26
CPSF7-201ENST00000340437 ZNF620Q6ZNG0 422 aa13.41□□□□□ -0.26
CPSF7-201ENST00000340437 TOMM5Q8N4H5 51 aa13.41□□□□□ -0.26
CPSF7-201ENST00000340437 MED18Q9BUE0 208 aa13.41□□□□□ -0.26
CPSF7-201ENST00000340437 GON7Q9BXV9 100 aa13.41□□□□□ -0.26
CPSF7-201ENST00000340437 KCNN2Q9H2S1 579 aa13.41□□□□□ -0.26
CPSF7-201ENST00000340437 ING4Q9UNL4 249 aa13.41□□□□□ -0.26
CPSF7-201ENST00000340437 AK6Q9Y3D8 172 aaKnown RBP13.41□□□□□ -0.26
CPSF7-201ENST00000340437 UNC119BA6NIH7 251 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms