RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 C18orf63Q68DL7 685 aa15.13■□□□□ 0.01
NPHP3-201ENST00000337331 TMEM107Q6UX40 140 aa15.13■□□□□ 0.01
NPHP3-201ENST00000337331 SETD7Q8WTS6 366 aaKnown RBP15.13■□□□□ 0.01
NPHP3-201ENST00000337331 GIMAP5Q96F15 307 aa15.13■□□□□ 0.01
NPHP3-201ENST00000337331 EPYCQ99645 322 aa15.13■□□□□ 0.01
NPHP3-201ENST00000337331 TCEAL7Q9BRU2 100 aa15.13■□□□□ 0.01
NPHP3-201ENST00000337331 OR8D2Q9GZM6 311 aa15.13■□□□□ 0.01
NPHP3-201ENST00000337331 ZNF350Q9GZX5 532 aa15.13■□□□□ 0.01
NPHP3-201ENST00000337331 SEC61A2Q9H9S3 476 aa15.13■□□□□ 0.01
NPHP3-201ENST00000337331 HEBP1Q9NRV9 189 aa15.13■□□□□ 0.01
NPHP3-201ENST00000337331 RNF186Q9NXI6 227 aa15.13■□□□□ 0.01
NPHP3-201ENST00000337331 EMC8O43402 210 aa15.13■□□□□ 0.01
NPHP3-201ENST00000337331 VAMP1P23763 118 aa15.13■□□□□ 0.01
NPHP3-201ENST00000337331 S100PP25815 95 aa15.13■□□□□ 0.01
NPHP3-201ENST00000337331 GJA5P36382 358 aa15.13■□□□□ 0.01
NPHP3-201ENST00000337331 POLR2GP62487 172 aaKnown RBP eCLIP15.13■□□□□ 0.01
NPHP3-201ENST00000337331 COL19A1Q14993 1142 aa15.13■□□□□ 0.01
NPHP3-201ENST00000337331 NNATQ16517 81 aa15.13■□□□□ 0.01
NPHP3-201ENST00000337331 LRFN4Q6PJG9 635 aa15.13■□□□□ 0.01
NPHP3-201ENST00000337331 ZNF101Q8IZC7 436 aa15.13■□□□□ 0.01
NPHP3-201ENST00000337331 ACBD7Q8N6N7 88 aa15.13■□□□□ 0.01
NPHP3-201ENST00000337331 OR2AJ1Q8NGZ0 328 aa15.13■□□□□ 0.01
NPHP3-201ENST00000337331 C16orf78Q8WTQ4 265 aa15.13■□□□□ 0.01
NPHP3-201ENST00000337331 SPHK1Q9NYA1 384 aa15.13■□□□□ 0.01
NPHP3-201ENST00000337331 MROH6A6NGR9 719 aa15.13■□□□□ 0.01
NPHP3-201ENST00000337331 DRGXA6NNA5 263 aa15.13■□□□□ 0.01
NPHP3-201ENST00000337331 D6RAR5 112 aa15.13■□□□□ 0.01
NPHP3-201ENST00000337331 PRKYO43930 277 aa15.13■□□□□ 0.01
NPHP3-201ENST00000337331 ADAP00813 363 aa15.13■□□□□ 0.01
NPHP3-201ENST00000337331 BTG1P62324 171 aa15.13■□□□□ 0.01
NPHP3-201ENST00000337331 HTR4Q13639 388 aa15.13■□□□□ 0.01
NPHP3-201ENST00000337331 UBXN2BQ14CS0 331 aa15.13■□□□□ 0.01
NPHP3-201ENST00000337331 PAQR6Q6TCH4 344 aa15.13■□□□□ 0.01
NPHP3-201ENST00000337331 MSANTD1Q6ZTZ1 278 aa15.13■□□□□ 0.01
NPHP3-201ENST00000337331 CNOT9Q92600 299 aaKnown RBP15.13■□□□□ 0.01
NPHP3-201ENST00000337331 S100A16Q96FQ6 103 aaKnown RBP15.13■□□□□ 0.01
NPHP3-201ENST00000337331 ACPTQ9BZG2 426 aa15.13■□□□□ 0.01
NPHP3-201ENST00000337331 NMNAT1Q9HAN9 279 aaPredicted RBP15.13■□□□□ 0.01
NPHP3-201ENST00000337331 ASB4Q9Y574 426 aa15.13■□□□□ 0.01
NPHP3-201ENST00000337331 UBR2Q8IWV8 1755 aa15.12■□□□□ 0.01
NPHP3-201ENST00000337331 CDC123O75794 336 aaPredicted RBP15.12■□□□□ 0.01
NPHP3-201ENST00000337331 TNFP01375 233 aa15.12■□□□□ 0.01
NPHP3-201ENST00000337331 GABRA3P34903 492 aa15.12■□□□□ 0.01
NPHP3-201ENST00000337331 BEX5Q5H9J7 111 aa15.12■□□□□ 0.01
NPHP3-201ENST00000337331 METTL11BQ5VVY1 283 aa15.12■□□□□ 0.01
NPHP3-201ENST00000337331 SLC22A10Q63ZE4 541 aa15.12■□□□□ 0.01
NPHP3-201ENST00000337331 GPR139Q6DWJ6 353 aa15.12■□□□□ 0.01
NPHP3-201ENST00000337331 TMEM207Q6UWW9 146 aa15.12■□□□□ 0.01
NPHP3-201ENST00000337331 SUN3Q8TAQ9 357 aa15.12■□□□□ 0.01
NPHP3-201ENST00000337331 TRMT10AQ8TBZ6 339 aaKnown RBP15.12■□□□□ 0.01
NPHP3-201ENST00000337331 CCDC107Q8WV48 283 aa15.12■□□□□ 0.01
NPHP3-201ENST00000337331 ECHDC3Q96DC8 303 aa15.12■□□□□ 0.01
NPHP3-201ENST00000337331 HSPA12BQ96MM6 686 aa15.12■□□□□ 0.01
NPHP3-201ENST00000337331 CA5BQ9Y2D0 317 aa15.12■□□□□ 0.01
NPHP3-201ENST00000337331 IGLON5A6NGN9 336 aa15.12■□□□□ 0.01
NPHP3-201ENST00000337331 S100A11P31949 105 aa15.12■□□□□ 0.01
NPHP3-201ENST00000337331 NAA10P41227 235 aaPredicted RBP15.12■□□□□ 0.01
NPHP3-201ENST00000337331 RAB33AQ14088 237 aa15.12■□□□□ 0.01
NPHP3-201ENST00000337331 IRF3Q14653 427 aa15.12■□□□□ 0.01
NPHP3-201ENST00000337331 TRILQ7L0X0 811 aa15.12■□□□□ 0.01
NPHP3-201ENST00000337331 CEACAM19Q7Z692 300 aa15.12■□□□□ 0.01
NPHP3-201ENST00000337331 GID4Q8IVV7 300 aa15.12■□□□□ 0.01
NPHP3-201ENST00000337331 RLIMQ9NVW2 624 aa15.12■□□□□ 0.01
NPHP3-201ENST00000337331 ASPDHA6ND91 283 aa15.12■□□□□ 0.01
NPHP3-201ENST00000337331 OR6C65A6NJZ3 312 aa15.12■□□□□ 0.01
NPHP3-201ENST00000337331 PRSS23O95084 383 aa15.12■□□□□ 0.01
NPHP3-201ENST00000337331 CYBAP13498 195 aa15.12■□□□□ 0.01
NPHP3-201ENST00000337331 PGAM2P15259 253 aa15.12■□□□□ 0.01
NPHP3-201ENST00000337331 ACVR1BP36896 505 aa15.12■□□□□ 0.01
NPHP3-201ENST00000337331 BAMBIQ13145 260 aa15.12■□□□□ 0.01
NPHP3-201ENST00000337331 DHCR24Q15392 516 aa15.12■□□□□ 0.01
NPHP3-201ENST00000337331 OR4N5Q8IXE1 308 aa15.12■□□□□ 0.01
NPHP3-201ENST00000337331 GATSQ8NAP1 163 aa15.12■□□□□ 0.01
NPHP3-201ENST00000337331 PXYLP1Q8TE99 480 aa15.12■□□□□ 0.01
NPHP3-201ENST00000337331 C15orf40Q8WUR7 153 aa15.12■□□□□ 0.01
NPHP3-201ENST00000337331 ACOT12Q8WYK0 555 aa15.12■□□□□ 0.01
NPHP3-201ENST00000337331 NSMAFQ92636 917 aa15.12■□□□□ 0.01
NPHP3-201ENST00000337331 KIAA1143Q96AT1 154 aaPredicted RBP15.12■□□□□ 0.01
NPHP3-201ENST00000337331 MOAP1Q96BY2 351 aa15.12■□□□□ 0.01
NPHP3-201ENST00000337331 NPAS1Q99742 590 aa15.12■□□□□ 0.01
NPHP3-201ENST00000337331 IL20RAQ9UHF4 553 aa15.12■□□□□ 0.01
NPHP3-201ENST00000337331 SNX11Q9Y5W9 270 aa15.12■□□□□ 0.01
NPHP3-201ENST00000337331 C1orf226A1L170 272 aa15.11■□□□□ 0.01
NPHP3-201ENST00000337331 CHP2O43745 196 aa15.11■□□□□ 0.01
NPHP3-201ENST00000337331 GPR4P46093 362 aa15.11■□□□□ 0.01
NPHP3-201ENST00000337331 MTNR1AP48039 350 aa15.11■□□□□ 0.01
NPHP3-201ENST00000337331 NRG3P56975 720 aa15.11■□□□□ 0.01
NPHP3-201ENST00000337331 SELENOWP63302 87 aa15.11■□□□□ 0.01
NPHP3-201ENST00000337331 PIN1Q13526 163 aaPredicted RBP15.11■□□□□ 0.01
NPHP3-201ENST00000337331 CBARPQ8N350 705 aaPredicted RBP15.11■□□□□ 0.01
NPHP3-201ENST00000337331 SCARB1Q8WTV0 552 aa15.11■□□□□ 0.01
NPHP3-201ENST00000337331 RAB7BQ96AH8 199 aa15.11■□□□□ 0.01
NPHP3-201ENST00000337331 CREBZFQ9NS37 354 aa15.11■□□□□ 0.01
NPHP3-201ENST00000337331 SLC22A11Q9NSA0 550 aa15.11■□□□□ 0.01
NPHP3-201ENST00000337331 RASD1Q9Y272 281 aa15.11■□□□□ 0.01
NPHP3-201ENST00000337331 J3KTA2 159 aa15.11■□□□□ 0.01
NPHP3-201ENST00000337331 GABRB1P18505 474 aa15.11■□□□□ 0.01
NPHP3-201ENST00000337331 RASGEF1BQ0VAM2 473 aa15.11■□□□□ 0.01
NPHP3-201ENST00000337331 KIAA0319Q5VV43 1072 aa15.11■□□□□ 0.01
NPHP3-201ENST00000337331 C17orf99Q6UX52 265 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms