RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 C6P13671 934 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 GIFP27352 417 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 RFC3P40938 356 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 ERVFC1P60507 584 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 TNK1Q13470 666 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 TMEM183BQ1AE95 376 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 GLYR1Q49A26 553 aaPredicted RBP5.22□□□□□ -1.57
PTPRB-202ENST00000334414 LYPD4Q6UWN0 246 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 OR51L1Q8NGJ5 315 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 PHOSPHO1Q8TCT1 267 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 CMTM3Q96MX0 182 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 PKMYT1Q99640 499 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 LMF2Q9BU23 707 aaKnown RBP5.22□□□□□ -1.57
PTPRB-202ENST00000334414 C1QTNF2Q9BXJ5 285 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 PBX4Q9BYU1 374 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 ADAM7Q9H2U9 754 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 NTN4Q9HB63 628 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 C2orf42Q9NWW7 574 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 PGAP2Q9UHJ9 254 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 LOC102725191A0A1B0GVB3 256 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 RNF225M0QZC1 329 aaPredicted RBP5.22□□□□□ -1.57
PTPRB-202ENST00000334414 BRINP1O60477 761 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 CYTIPO60759 359 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 BCKDHBP21953 392 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 UBE2G2P60604 165 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 IQCJQ1A5X6 159 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 TPRG1Q6ZUI0 275 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 TMUB2Q71RG4 321 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 SPRED1Q7Z699 444 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 ADIPOR2Q86V24 386 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 OR14L1PQ8NHC6 308 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 CERKQ8TCT0 537 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 SLC25A46Q96AG3 418 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 SLC25A44Q96H78 314 aaPredicted RBP5.22□□□□□ -1.57
PTPRB-202ENST00000334414 SEC61A2Q9H9S3 476 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 NRIP3Q9NQ35 241 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 SLC22A14Q9Y267 594 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 V9GY05 133 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 MYH1P12882 1939 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 MYH4Q9Y623 1939 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 A0A1W2PPV4 95 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 CLDN5O00501 218 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 ALPLP05186 524 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 RAB6AP20340 208 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 DDCP20711 480 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 ETV4P43268 484 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 TLE1Q04724 770 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 TAF10Q12962 218 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 SERTAD2Q14140 314 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 TMEM135Q86UB9 458 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 GNPNAT1Q96EK6 184 aaPredicted RBP5.22□□□□□ -1.57
PTPRB-202ENST00000334414 GPR20Q99678 358 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 GSX2Q9BZM3 304 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 SLC35A3Q9Y2D2 325 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 ZNF142P52746 1687 aaPredicted RBP5.22□□□□□ -1.57
PTPRB-202ENST00000334414 PRAMEF11O60813 436 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 IRF2P14316 349 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 PRKACGP22612 351 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 ZNF136P52737 540 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 ERVK-21P61565 698 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 WDR5P61964 334 aaKnown RBP5.22□□□□□ -1.57
PTPRB-202ENST00000334414 PLGLB1Q02325 96 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 AAK1Q2M2I8 961 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 BTNL8Q6UX41 500 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 ANKRD9Q96BM1 317 aaPredicted RBP5.22□□□□□ -1.57
PTPRB-202ENST00000334414 SLC38A3Q99624 504 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 RRAGCQ9HB90 399 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 RNF24Q9Y225 148 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 PIK3C2AO00443 1686 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 MYH10P35580 1976 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 TRAV18A0A075B6X5 111 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 TMEM150BA6NC51 233 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 VSTM2BA6NLU5 285 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 OR5K4A6NMS3 321 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 SLC35E2BP0CK96 405 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 PTAFRP25105 342 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 CHRNA4P43681 627 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 ADGRF1Q5T601 910 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 OR13D1Q8NGV5 346 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 OR6N1Q8NGY5 312 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 M1APQ8TC57 530 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 MR1Q95460 341 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 P2RX7Q99572 595 aaKnown RBP5.22□□□□□ -1.57
PTPRB-202ENST00000334414 DHRS4Q9BTZ2 278 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 GAR1Q9NY12 217 aaKnown RBP5.22□□□□□ -1.57
PTPRB-202ENST00000334414 TIMM8BQ9Y5J9 83 aaPredicted RBP5.22□□□□□ -1.57
PTPRB-202ENST00000334414 MT-ND4P03905 459 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 FGF7P21781 194 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 MLLT10P55197 1068 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 NFATC2Q13469 925 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 LRRC32Q14392 662 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 NXPE4Q6UWF7 544 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 LYSMD2Q8IV50 215 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 SIGLECL1Q8N7X8 197 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 OR5L2Q8NGL0 311 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 PPP1R35Q8TAP8 253 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 CD200R1Q8TD46 325 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 ST7LQ8TDW4 575 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 GABARAPL1Q9H0R8 117 aa5.22□□□□□ -1.57
PTPRB-202ENST00000334414 COPS3Q9UNS2 423 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms