RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 ABRACLQ9P1F3 81 aa22.74■■□□□ 1.23
SOX1-201ENST00000330949 IGLV3-16A0A075B6K0 115 aa22.73■■□□□ 1.23
SOX1-201ENST00000330949 PRKAR2AP13861 404 aaKnown RBP22.73■■□□□ 1.23
SOX1-201ENST00000330949 CNTN1Q12860 1018 aa22.73■■□□□ 1.23
SOX1-201ENST00000330949 HFEQ30201 348 aa22.73■■□□□ 1.23
SOX1-201ENST00000330949 TBC1D19Q8N5T2 526 aa22.73■■□□□ 1.23
SOX1-201ENST00000330949 PXT1Q8NFP0 134 aa22.73■■□□□ 1.23
SOX1-201ENST00000330949 PIGKQ92643 395 aa22.73■■□□□ 1.23
SOX1-201ENST00000330949 ART5Q96L15 291 aa22.73■■□□□ 1.23
SOX1-201ENST00000330949 PRRC1Q96M27 445 aa22.73■■□□□ 1.23
SOX1-201ENST00000330949 DDX31Q9H8H2 851 aaKnown RBP22.73■■□□□ 1.23
SOX1-201ENST00000330949 TP53BP1Q12888 1972 aaPredicted RBP22.73■■□□□ 1.23
SOX1-201ENST00000330949 OR5F1O95221 314 aa22.73■■□□□ 1.23
SOX1-201ENST00000330949 ECDO95905 644 aaPredicted RBP22.73■■□□□ 1.23
SOX1-201ENST00000330949 RORAP35398 523 aa22.73■■□□□ 1.23
SOX1-201ENST00000330949 ERVK-25P63136 954 aa22.73■■□□□ 1.23
SOX1-201ENST00000330949 E2F1Q01094 437 aa22.73■■□□□ 1.23
SOX1-201ENST00000330949 CEACAM19Q7Z692 300 aa22.73■■□□□ 1.23
SOX1-201ENST00000330949 HRASLSQ9HDD0 168 aa22.73■■□□□ 1.23
SOX1-201ENST00000330949 MED17Q9NVC6 651 aa22.73■■□□□ 1.23
SOX1-201ENST00000330949 ENTPD4Q9Y227 616 aa22.73■■□□□ 1.23
SOX1-201ENST00000330949 PLXNB3Q9ULL4 1909 aa22.72■■□□□ 1.23
SOX1-201ENST00000330949 RAB3BP20337 219 aa22.72■■□□□ 1.23
SOX1-201ENST00000330949 LGALS3BPQ08380 585 aa22.72■■□□□ 1.23
SOX1-201ENST00000330949 TSPAN31Q12999 210 aa22.72■■□□□ 1.23
SOX1-201ENST00000330949 C6orf132Q5T0Z8 1188 aa22.72■■□□□ 1.23
SOX1-201ENST00000330949 FAM83HQ6ZRV2 1179 aaPredicted RBP22.72■■□□□ 1.23
SOX1-201ENST00000330949 ACBD7Q8N6N7 88 aa22.72■■□□□ 1.23
SOX1-201ENST00000330949 ECHDC3Q96DC8 303 aa22.72■■□□□ 1.23
SOX1-201ENST00000330949 AUNIPQ9H7T9 357 aa22.72■■□□□ 1.23
SOX1-201ENST00000330949 RCE1Q9Y256 329 aa22.72■■□□□ 1.23
SOX1-201ENST00000330949 SLC38A8A6NNN8 435 aa22.72■■□□□ 1.23
SOX1-201ENST00000330949 SURF4O15260 269 aa22.72■■□□□ 1.23
SOX1-201ENST00000330949 YKT6O15498 198 aa22.72■■□□□ 1.23
SOX1-201ENST00000330949 FGF18O76093 207 aa22.72■■□□□ 1.23
SOX1-201ENST00000330949 CH25HO95992 272 aa22.72■■□□□ 1.23
SOX1-201ENST00000330949 CD96P40200 585 aa22.72■■□□□ 1.23
SOX1-201ENST00000330949 RAD52P43351 418 aa22.72■■□□□ 1.23
SOX1-201ENST00000330949 AP3S2P59780 193 aa22.72■■□□□ 1.23
SOX1-201ENST00000330949 ZNF660Q6AZW8 331 aaPredicted RBP22.72■■□□□ 1.23
SOX1-201ENST00000330949 TREX2Q9BQ50 279 aaPredicted RBP22.72■■□□□ 1.23
SOX1-201ENST00000330949 EXOSC3Q9NQT5 275 aaKnown RBP22.72■■□□□ 1.23
SOX1-201ENST00000330949 STOX2Q9P2F5 926 aaPredicted RBP22.72■■□□□ 1.23
SOX1-201ENST00000330949 CYB5R1Q9UHQ9 305 aa22.72■■□□□ 1.23
SOX1-201ENST00000330949 MRTO4Q9UKD2 239 aaKnown RBP22.72■■□□□ 1.23
SOX1-201ENST00000330949 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP22.72■■□□□ 1.23
SOX1-201ENST00000330949 SAP18O00422 153 aaKnown RBP22.72■■□□□ 1.23
SOX1-201ENST00000330949 PRAMEF2O60811 474 aa22.72■■□□□ 1.23
SOX1-201ENST00000330949 SIM1P81133 766 aaPredicted RBP22.72■■□□□ 1.23
SOX1-201ENST00000330949 PRSS45Q7RTY3 260 aa22.72■■□□□ 1.23
SOX1-201ENST00000330949 MEX3DQ86XN8 651 aaKnown RBP22.72■■□□□ 1.23
SOX1-201ENST00000330949 KRT78Q8N1N4 520 aa22.72■■□□□ 1.23
SOX1-201ENST00000330949 OR5W2Q8NH69 310 aa22.72■■□□□ 1.23
SOX1-201ENST00000330949 FOXJ1Q92949 421 aa22.72■■□□□ 1.23
SOX1-201ENST00000330949 TAS2R5Q9NYW4 299 aa22.72■■□□□ 1.23
SOX1-201ENST00000330949 TAAR2Q9P1P5 351 aa22.72■■□□□ 1.23
SOX1-201ENST00000330949 FOXE1O00358 373 aaPredicted RBP22.71■■□□□ 1.23
SOX1-201ENST00000330949 COCHO43405 550 aa22.71■■□□□ 1.23
SOX1-201ENST00000330949 SULT1B1O43704 296 aa22.71■■□□□ 1.23
SOX1-201ENST00000330949 ZDHHC11BP0C7U3 371 aa22.71■■□□□ 1.23
SOX1-201ENST00000330949 MTFR2Q6P444 385 aa22.71■■□□□ 1.23
SOX1-201ENST00000330949 ARL9Q6T311 187 aa22.71■■□□□ 1.23
SOX1-201ENST00000330949 ZNF600Q6ZNG1 722 aa22.71■■□□□ 1.23
SOX1-201ENST00000330949 ALG8Q9BVK2 526 aa22.71■■□□□ 1.23
SOX1-201ENST00000330949 ANKRD19PQ9H560 264 aa22.71■■□□□ 1.23
SOX1-201ENST00000330949 CWH43Q9H720 699 aa22.71■■□□□ 1.23
SOX1-201ENST00000330949 MBD1Q9UIS9 605 aaPredicted RBP22.71■■□□□ 1.23
SOX1-201ENST00000330949 SNRPGP15A8MWD9 76 aa22.71■■□□□ 1.23
SOX1-201ENST00000330949 STX11O75558 287 aa22.71■■□□□ 1.23
SOX1-201ENST00000330949 IL3P08700 152 aa22.71■■□□□ 1.23
SOX1-201ENST00000330949 TRIM23P36406 574 aa22.71■■□□□ 1.23
SOX1-201ENST00000330949 STAT5AP42229 794 aa22.71■■□□□ 1.23
SOX1-201ENST00000330949 ZNF626Q68DY1 528 aa22.71■■□□□ 1.23
SOX1-201ENST00000330949 TMPRSS11BQ86T26 416 aa22.71■■□□□ 1.23
SOX1-201ENST00000330949 SIRT6Q8N6T7 355 aa22.71■■□□□ 1.23
SOX1-201ENST00000330949 C7orf57Q8NEG2 295 aa22.71■■□□□ 1.23
SOX1-201ENST00000330949 SEMA4CQ9C0C4 833 aa22.71■■□□□ 1.23
SOX1-201ENST00000330949 NOX3Q9HBY0 568 aa22.71■■□□□ 1.23
SOX1-201ENST00000330949 DOCK6Q96HP0 2047 aa22.71■■□□□ 1.23
SOX1-201ENST00000330949 HMGN4O00479 90 aa22.7■■□□□ 1.22
SOX1-201ENST00000330949 SLC11A1P49279 550 aa22.7■■□□□ 1.22
SOX1-201ENST00000330949 CCDC157Q569K6 752 aa22.7■■□□□ 1.22
SOX1-201ENST00000330949 OR51G2Q8NGK0 314 aa22.7■■□□□ 1.22
SOX1-201ENST00000330949 PNPLA2Q96AD5 504 aa22.7■■□□□ 1.22
SOX1-201ENST00000330949 OR51I1Q9H343 314 aa22.7■■□□□ 1.22
SOX1-201ENST00000330949 FBXL3Q9UKT7 428 aa22.7■■□□□ 1.22
SOX1-201ENST00000330949 OR6C75A6NL08 312 aa22.7■■□□□ 1.22
SOX1-201ENST00000330949 KLK1P06870 262 aa22.7■■□□□ 1.22
SOX1-201ENST00000330949 PAICSP22234 425 aaKnown RBP22.7■■□□□ 1.22
SOX1-201ENST00000330949 MAPK3P27361 379 aaPredicted RBP22.7■■□□□ 1.22
SOX1-201ENST00000330949 PTSQ03393 145 aa22.7■■□□□ 1.22
SOX1-201ENST00000330949 ZNF783Q6ZMS7 281 aa22.7■■□□□ 1.22
SOX1-201ENST00000330949 KLHDC8AQ8IYD2 350 aa22.7■■□□□ 1.22
SOX1-201ENST00000330949 TMIEQ8NEW7 156 aa22.7■■□□□ 1.22
SOX1-201ENST00000330949 ASZ1Q8WWH4 475 aa22.7■■□□□ 1.22
SOX1-201ENST00000330949 OSTF1Q92882 214 aa22.7■■□□□ 1.22
SOX1-201ENST00000330949 ZNF768Q9H5H4 540 aaKnown RBP22.7■■□□□ 1.22
SOX1-201ENST00000330949 A0A087WUU8 490 aa22.69■■□□□ 1.22
SOX1-201ENST00000330949 TGFB1P01137 390 aa22.69■■□□□ 1.22
SOX1-201ENST00000330949 ATP1B2P14415 290 aaPredicted RBP22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms