RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 ACTRT2Q8TDY3 377 aa24.96■■□□□ 1.59
ATPAF1-201ENST00000329231 MAELQ96JY0 434 aaKnown RBP24.96■■□□□ 1.59
ATPAF1-201ENST00000329231 TEX37Q96LM6 180 aa24.96■■□□□ 1.59
ATPAF1-201ENST00000329231 C7orf26Q96N11 449 aa24.96■■□□□ 1.59
ATPAF1-201ENST00000329231 CLCF1Q9UBD9 225 aa24.96■■□□□ 1.59
ATPAF1-201ENST00000329231 H3BNH8 94 aa24.95■■□□□ 1.58
ATPAF1-201ENST00000329231 IL18BPO95998 194 aa24.95■■□□□ 1.58
ATPAF1-201ENST00000329231 TMIGD3P0DMS9 266 aaPredicted RBP24.95■■□□□ 1.58
ATPAF1-201ENST00000329231 IDO1P14902 403 aa24.95■■□□□ 1.58
ATPAF1-201ENST00000329231 ASCL1P50553 236 aa24.95■■□□□ 1.58
ATPAF1-201ENST00000329231 POMZP3Q6PJE2 187 aa24.95■■□□□ 1.58
ATPAF1-201ENST00000329231 GRAMD2AQ8IUY3 354 aa24.95■■□□□ 1.58
ATPAF1-201ENST00000329231 MIPOL1Q8TD10 442 aa24.95■■□□□ 1.58
ATPAF1-201ENST00000329231 CCDC115Q96NT0 180 aa24.95■■□□□ 1.58
ATPAF1-201ENST00000329231 STOML1Q9UBI4 398 aa24.95■■□□□ 1.58
ATPAF1-201ENST00000329231 BTNL2Q9UIR0 455 aa24.95■■□□□ 1.58
ATPAF1-201ENST00000329231 VDAC3Q9Y277 283 aa24.95■■□□□ 1.58
ATPAF1-201ENST00000329231 AP4B1Q9Y6B7 739 aa24.95■■□□□ 1.58
ATPAF1-201ENST00000329231 H3BML4 177 aa24.94■■□□□ 1.58
ATPAF1-201ENST00000329231 RCBTB2O95199 551 aa24.94■■□□□ 1.58
ATPAF1-201ENST00000329231 ZNF17P17021 662 aa24.94■■□□□ 1.58
ATPAF1-201ENST00000329231 ZNF41P51814 821 aaPredicted RBP24.94■■□□□ 1.58
ATPAF1-201ENST00000329231 ATP12AP54707 1039 aa24.94■■□□□ 1.58
ATPAF1-201ENST00000329231 LRRC74AQ0VAA2 488 aa24.94■■□□□ 1.58
ATPAF1-201ENST00000329231 CD226Q15762 336 aa24.94■■□□□ 1.58
ATPAF1-201ENST00000329231 TMEM44Q2T9K0 475 aa24.94■■□□□ 1.58
ATPAF1-201ENST00000329231 SLC9B1Q4ZJI4 515 aa24.94■■□□□ 1.58
ATPAF1-201ENST00000329231 KLHL26Q53HC5 615 aa24.94■■□□□ 1.58
ATPAF1-201ENST00000329231 GLB1L3Q8NCI6 653 aaPredicted RBP24.94■■□□□ 1.58
ATPAF1-201ENST00000329231 CHDHQ8NE62 594 aaPredicted RBP24.94■■□□□ 1.58
ATPAF1-201ENST00000329231 B4GALNT2Q8NHY0 566 aa24.94■■□□□ 1.58
ATPAF1-201ENST00000329231 PHOSPHO1Q8TCT1 267 aa24.94■■□□□ 1.58
ATPAF1-201ENST00000329231 SH3YL1Q96HL8 342 aaPredicted RBP24.94■■□□□ 1.58
ATPAF1-201ENST00000329231 SDF2Q99470 211 aa24.94■■□□□ 1.58
ATPAF1-201ENST00000329231 SERHL2Q9H4I8 314 aa24.94■■□□□ 1.58
ATPAF1-201ENST00000329231 EXD2Q9NVH0 621 aa24.94■■□□□ 1.58
ATPAF1-201ENST00000329231 TEX15Q9BXT5 2789 aa24.93■■□□□ 1.58
ATPAF1-201ENST00000329231 SYT5O00445 386 aa24.93■■□□□ 1.58
ATPAF1-201ENST00000329231 HCRTR2O43614 444 aa24.93■■□□□ 1.58
ATPAF1-201ENST00000329231 AGR2O95994 175 aa24.93■■□□□ 1.58
ATPAF1-201ENST00000329231 PGRP06401 933 aa24.93■■□□□ 1.58
ATPAF1-201ENST00000329231 MAVSQ7Z434 540 aa24.93■■□□□ 1.58
ATPAF1-201ENST00000329231 ZBTB8AQ96BR9 441 aa24.93■■□□□ 1.58
ATPAF1-201ENST00000329231 OR52E6Q96RD3 313 aa24.93■■□□□ 1.58
ATPAF1-201ENST00000329231 SFXN3Q9BWM7 321 aa24.93■■□□□ 1.58
ATPAF1-201ENST00000329231 OR51I1Q9H343 314 aa24.93■■□□□ 1.58
ATPAF1-201ENST00000329231 KIAA1549Q9HCM3 1950 aa24.93■■□□□ 1.58
ATPAF1-201ENST00000329231 NPIPA5A0A0B4J1W7 369 aa24.92■■□□□ 1.58
ATPAF1-201ENST00000329231 NPIPA7E9PJI5 369 aa24.92■■□□□ 1.58
ATPAF1-201ENST00000329231 SEC14L5O43304 696 aa24.92■■□□□ 1.58
ATPAF1-201ENST00000329231 NPIPA8P0DM63 369 aa24.92■■□□□ 1.58
ATPAF1-201ENST00000329231 IL12AP29459 219 aa24.92■■□□□ 1.58
ATPAF1-201ENST00000329231 CHI3L1P36222 383 aaPredicted RBP24.92■■□□□ 1.58
ATPAF1-201ENST00000329231 PEX19P40855 299 aa24.92■■□□□ 1.58
ATPAF1-201ENST00000329231 SUCLG1P53597 346 aaKnown RBP24.92■■□□□ 1.58
ATPAF1-201ENST00000329231 FBXL19-AS1Q494R0 122 aa24.92■■□□□ 1.58
ATPAF1-201ENST00000329231 PDCD4Q53EL6 469 aaKnown RBP24.92■■□□□ 1.58
ATPAF1-201ENST00000329231 ATAD3BQ5T9A4 648 aa24.92■■□□□ 1.58
ATPAF1-201ENST00000329231 SAXO2Q658L1 398 aa24.92■■□□□ 1.58
ATPAF1-201ENST00000329231 C16orf62Q7Z3J2 963 aa24.92■■□□□ 1.58
ATPAF1-201ENST00000329231 P4HA3Q7Z4N8 544 aa24.92■■□□□ 1.58
ATPAF1-201ENST00000329231 GTPBP8Q8N3Z3 284 aaPredicted RBP24.92■■□□□ 1.58
ATPAF1-201ENST00000329231 TRIML2Q8N7C3 387 aa24.92■■□□□ 1.58
ATPAF1-201ENST00000329231 CKAP2Q8WWK9 683 aa24.92■■□□□ 1.58
ATPAF1-201ENST00000329231 INTS12Q96CB8 462 aaKnown RBP24.92■■□□□ 1.58
ATPAF1-201ENST00000329231 NEURL3Q96EH8 262 aa24.92■■□□□ 1.58
ATPAF1-201ENST00000329231 SLC35A5Q9BS91 424 aa24.92■■□□□ 1.58
ATPAF1-201ENST00000329231 MED17Q9NVC6 651 aa24.92■■□□□ 1.58
ATPAF1-201ENST00000329231 KCNN3Q9UGI6 736 aa24.92■■□□□ 1.58
ATPAF1-201ENST00000329231 FOXD3Q9UJU5 478 aaPredicted RBP24.92■■□□□ 1.58
ATPAF1-201ENST00000329231 DTNAQ9Y4J8 743 aa24.92■■□□□ 1.58
ATPAF1-201ENST00000329231 USH1CQ9Y6N9 552 aa24.92■■□□□ 1.58
ATPAF1-201ENST00000329231 C7orf72A4D263 438 aa24.91■■□□□ 1.58
ATPAF1-201ENST00000329231 C9JVG2 144 aa24.91■■□□□ 1.58
ATPAF1-201ENST00000329231 NPIPB9F8W1W9 429 aa24.91■■□□□ 1.58
ATPAF1-201ENST00000329231 ZNF195O14628 629 aa24.91■■□□□ 1.58
ATPAF1-201ENST00000329231 TNFRSF21O75509 655 aa24.91■■□□□ 1.58
ATPAF1-201ENST00000329231 STX11O75558 287 aa24.91■■□□□ 1.58
ATPAF1-201ENST00000329231 UQCRC1P31930 480 aa24.91■■□□□ 1.58
ATPAF1-201ENST00000329231 AGFG1P52594 562 aaKnown RBP24.91■■□□□ 1.58
ATPAF1-201ENST00000329231 DLX5P56178 289 aa24.91■■□□□ 1.58
ATPAF1-201ENST00000329231 CLDN15P56746 228 aa24.91■■□□□ 1.58
ATPAF1-201ENST00000329231 RPS3AP61247 264 aaKnown RBP24.91■■□□□ 1.58
ATPAF1-201ENST00000329231 EEF1A1P68104 462 aaKnown RBP24.91■■□□□ 1.58
ATPAF1-201ENST00000329231 TLE4Q04727 773 aa24.91■■□□□ 1.58
ATPAF1-201ENST00000329231 GSTA3Q16772 222 aa24.91■■□□□ 1.58
ATPAF1-201ENST00000329231 PLPPR5Q32ZL2 321 aa24.91■■□□□ 1.58
ATPAF1-201ENST00000329231 ARHGAP11BQ3KRB8 267 aa24.91■■□□□ 1.58
ATPAF1-201ENST00000329231 EEF1A1P5Q5VTE0 462 aa24.91■■□□□ 1.58
ATPAF1-201ENST00000329231 PLXDC2Q6UX71 529 aa24.91■■□□□ 1.58
ATPAF1-201ENST00000329231 SMPDL3BQ92485 455 aa24.91■■□□□ 1.58
ATPAF1-201ENST00000329231 RNASE6Q93091 150 aaKnown RBP24.91■■□□□ 1.58
ATPAF1-201ENST00000329231 MAGEB18Q96M61 343 aa24.91■■□□□ 1.58
ATPAF1-201ENST00000329231 PANX1Q96RD7 426 aa24.91■■□□□ 1.58
ATPAF1-201ENST00000329231 NMUR2Q9GZQ4 415 aa24.91■■□□□ 1.58
ATPAF1-201ENST00000329231 SLCO1B3Q9NPD5 702 aa24.91■■□□□ 1.58
ATPAF1-201ENST00000329231 PCNX3Q9H6A9 2034 aa24.91■■□□□ 1.58
ATPAF1-201ENST00000329231 SLC22A20A6NK97 555 aa24.9■■□□□ 1.58
ATPAF1-201ENST00000329231 SHISA8B8ZZ34 492 aa24.9■■□□□ 1.58
ATPAF1-201ENST00000329231 GTPBP1O00178 669 aaKnown RBP24.9■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms