RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 TVP23BQ9NYZ1 205 aa13.81□□□□□ -0.2
TPM3-205ENST00000328159 FBXO4Q9UKT5 387 aa13.81□□□□□ -0.2
TPM3-205ENST00000328159 SRPK3Q9UPE1 567 aa13.81□□□□□ -0.2
TPM3-205ENST00000328159 COL5A1P20908 1838 aaPredicted RBP13.8□□□□□ -0.2
TPM3-205ENST00000328159 TCRBV16S1A1N1A0A5B0 115 aa13.8□□□□□ -0.2
TPM3-205ENST00000328159 EFCAB10A6NFE3 127 aa13.8□□□□□ -0.2
TPM3-205ENST00000328159 TRIM64BA6NI03 449 aa13.8□□□□□ -0.2
TPM3-205ENST00000328159 ENTPD6O75354 484 aa13.8□□□□□ -0.2
TPM3-205ENST00000328159 STSP08842 583 aa13.8□□□□□ -0.2
TPM3-205ENST00000328159 ACVR2AP27037 513 aa13.8□□□□□ -0.2
TPM3-205ENST00000328159 C21orf33P30042 268 aaPredicted RBP13.8□□□□□ -0.2
TPM3-205ENST00000328159 GPR4P46093 362 aa13.8□□□□□ -0.2
TPM3-205ENST00000328159 SMSP52788 366 aa13.8□□□□□ -0.2
TPM3-205ENST00000328159 EFNA3P52797 238 aa13.8□□□□□ -0.2
TPM3-205ENST00000328159 SLC37A1P57057 533 aa13.8□□□□□ -0.2
TPM3-205ENST00000328159 FGFBP1Q14512 234 aa13.8□□□□□ -0.2
TPM3-205ENST00000328159 ELAVL1Q15717 326 aaKnown RBP13.8□□□□□ -0.2
TPM3-205ENST00000328159 ZSWIM7Q19AV6 140 aa13.8□□□□□ -0.2
TPM3-205ENST00000328159 ACSM5Q6NUN0 579 aa13.8□□□□□ -0.2
TPM3-205ENST00000328159 RABEPKQ7Z6M1 372 aa13.8□□□□□ -0.2
TPM3-205ENST00000328159 STX19Q8N4C7 294 aa13.8□□□□□ -0.2
TPM3-205ENST00000328159 TCEANCQ8N8B7 351 aa13.8□□□□□ -0.2
TPM3-205ENST00000328159 DTWD2Q8NBA8 298 aa13.8□□□□□ -0.2
TPM3-205ENST00000328159 ZSCAN1Q8NBB4 408 aa13.8□□□□□ -0.2
TPM3-205ENST00000328159 RAB2BQ8WUD1 216 aa13.8□□□□□ -0.2
TPM3-205ENST00000328159 CLIP3Q96DZ5 547 aa13.8□□□□□ -0.2
TPM3-205ENST00000328159 SLC46A1Q96NT5 459 aa13.8□□□□□ -0.2
TPM3-205ENST00000328159 SYNDIG1Q9H7V2 258 aa13.8□□□□□ -0.2
TPM3-205ENST00000328159 TMEM27Q9HBJ8 222 aa13.8□□□□□ -0.2
TPM3-205ENST00000328159 KRCC1Q9NPI7 259 aaPredicted RBP13.8□□□□□ -0.2
TPM3-205ENST00000328159 DNAJB12Q9NXW2 375 aaKnown RBP13.8□□□□□ -0.2
TPM3-205ENST00000328159 CNOT2Q9NZN8 540 aaKnown RBP13.8□□□□□ -0.2
TPM3-205ENST00000328159 SELENONQ9NZV5 590 aa13.8□□□□□ -0.2
TPM3-205ENST00000328159 CLCA3PQ9Y6N3 262 aa13.8□□□□□ -0.2
TPM3-205ENST00000328159 ZDBF2Q9HCK1 2354 aa13.8□□□□□ -0.2
TPM3-205ENST00000328159 IGHV5-10-1A0A0J9YXX1 117 aa13.79□□□□□ -0.2
TPM3-205ENST00000328159 LCKP06239 509 aa13.79□□□□□ -0.2
TPM3-205ENST00000328159 PSMB9P28065 219 aa13.79□□□□□ -0.2
TPM3-205ENST00000328159 RORAP35398 523 aa13.79□□□□□ -0.2
TPM3-205ENST00000328159 PCYT1AP49585 367 aa13.79□□□□□ -0.2
TPM3-205ENST00000328159 ST3GAL4Q11206 333 aa13.79□□□□□ -0.2
TPM3-205ENST00000328159 TBCEQ15813 527 aaPredicted RBP13.79□□□□□ -0.2
TPM3-205ENST00000328159 OCLNQ16625 522 aa13.79□□□□□ -0.2
TPM3-205ENST00000328159 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.79□□□□□ -0.2
TPM3-205ENST00000328159 UBE2UQ5VVX9 321 aa13.79□□□□□ -0.2
TPM3-205ENST00000328159 ZNF613Q6PF04 617 aa13.79□□□□□ -0.2
TPM3-205ENST00000328159 WDR88Q6ZMY6 472 aa13.79□□□□□ -0.2
TPM3-205ENST00000328159 PRSS58Q8IYP2 241 aa13.79□□□□□ -0.2
TPM3-205ENST00000328159 POGLUT1Q8NBL1 392 aa13.79□□□□□ -0.2
TPM3-205ENST00000328159 OR8D4Q8NGM9 314 aa13.79□□□□□ -0.2
TPM3-205ENST00000328159 SLC2A12Q8TD20 617 aa13.79□□□□□ -0.2
TPM3-205ENST00000328159 FCGR1BQ92637 280 aa13.79□□□□□ -0.2
TPM3-205ENST00000328159 OR8D2Q9GZM6 311 aa13.79□□□□□ -0.2
TPM3-205ENST00000328159 DNAJC27Q9NZQ0 273 aa13.79□□□□□ -0.2
TPM3-205ENST00000328159 ENPP5Q9UJA9 477 aa13.79□□□□□ -0.2
TPM3-205ENST00000328159 TMEM221A6NGB7 291 aa13.78□□□□□ -0.2
TPM3-205ENST00000328159 M0R296 226 aa13.78□□□□□ -0.2
TPM3-205ENST00000328159 PRKYO43930 277 aa13.78□□□□□ -0.2
TPM3-205ENST00000328159 CER1O95813 267 aa13.78□□□□□ -0.2
TPM3-205ENST00000328159 DDAH2O95865 285 aa13.78□□□□□ -0.2
TPM3-205ENST00000328159 IGKV3-11P04433 115 aa13.78□□□□□ -0.2
TPM3-205ENST00000328159 PIPP12273 146 aaPredicted RBP13.78□□□□□ -0.2
TPM3-205ENST00000328159 CCNA2P20248 432 aa13.78□□□□□ -0.2
TPM3-205ENST00000328159 PPICP45877 212 aa13.78□□□□□ -0.2
TPM3-205ENST00000328159 SLC15A1P46059 708 aa13.78□□□□□ -0.2
TPM3-205ENST00000328159 ST13P50502 369 aaKnown RBP13.78□□□□□ -0.2
TPM3-205ENST00000328159 NSDHLQ15738 373 aa13.78□□□□□ -0.2
TPM3-205ENST00000328159 RHBDD2Q6NTF9 364 aa13.78□□□□□ -0.2
TPM3-205ENST00000328159 SLC27A4Q6P1M0 643 aa13.78□□□□□ -0.2
TPM3-205ENST00000328159 SLC16A12Q6ZSM3 486 aa13.78□□□□□ -0.2
TPM3-205ENST00000328159 COX15Q7KZN9 410 aa13.78□□□□□ -0.2
TPM3-205ENST00000328159 ANKRD13BQ86YJ7 626 aa13.78□□□□□ -0.2
TPM3-205ENST00000328159 CMIPQ8IY22 773 aa13.78□□□□□ -0.2
TPM3-205ENST00000328159 RNF113BQ8IZP6 322 aaKnown RBP13.78□□□□□ -0.2
TPM3-205ENST00000328159 FAM26EQ8N5C1 309 aa13.78□□□□□ -0.2
TPM3-205ENST00000328159 ZNF721Q8TF20 911 aa13.78□□□□□ -0.2
TPM3-205ENST00000328159 TMEM239Q8WW34 195 aa13.78□□□□□ -0.2
TPM3-205ENST00000328159 SLC35B4Q969S0 331 aa13.78□□□□□ -0.2
TPM3-205ENST00000328159 RNF31Q96EP0 1072 aa13.78□□□□□ -0.2
TPM3-205ENST00000328159 CCDC74BQ96LY2 380 aa13.78□□□□□ -0.2
TPM3-205ENST00000328159 OR6C1Q96RD1 312 aa13.78□□□□□ -0.2
TPM3-205ENST00000328159 TRIM2Q9C040 744 aa13.78□□□□□ -0.2
TPM3-205ENST00000328159 SLC7A5P2Q9GIP4 190 aa13.78□□□□□ -0.2
TPM3-205ENST00000328159 GPN2Q9H9Y4 310 aaPredicted RBP13.78□□□□□ -0.2
TPM3-205ENST00000328159 ZNF223Q9UK11 482 aaPredicted RBP13.78□□□□□ -0.2
TPM3-205ENST00000328159 CFL2Q9Y281 166 aa13.78□□□□□ -0.2
TPM3-205ENST00000328159 USP34Q70CQ2 3546 aa13.78□□□□□ -0.2
TPM3-205ENST00000328159 A0A1W2PPW3 197 aa13.78□□□□□ -0.2
TPM3-205ENST00000328159 ARHGAP33O14559 1287 aa13.78□□□□□ -0.2
TPM3-205ENST00000328159 POLR1CO15160 346 aaPredicted RBP13.78□□□□□ -0.2
TPM3-205ENST00000328159 TLX2O43763 284 aaPredicted RBP13.78□□□□□ -0.2
TPM3-205ENST00000328159 PTNP21246 168 aa13.78□□□□□ -0.2
TPM3-205ENST00000328159 ACAA2P42765 397 aaKnown RBP13.78□□□□□ -0.2
TPM3-205ENST00000328159 ROR2Q01974 943 aaKnown RBP13.78□□□□□ -0.2
TPM3-205ENST00000328159 IRF3Q14653 427 aa13.78□□□□□ -0.2
TPM3-205ENST00000328159 TRIM61Q5EBN2 209 aa13.78□□□□□ -0.2
TPM3-205ENST00000328159 SLC25A30Q5SVS4 291 aa13.78□□□□□ -0.2
TPM3-205ENST00000328159 MRGPREQ86SM8 312 aa13.78□□□□□ -0.2
TPM3-205ENST00000328159 LAPTM4BQ86VI4 370 aa13.78□□□□□ -0.2
TPM3-205ENST00000328159 RNF217Q8TC41 542 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms