RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 AICDAQ9GZX7 198 aa12.02□□□□□ -0.48
HMGCS1-201ENST00000325110 PRDM7Q9NQW5 492 aa12.02□□□□□ -0.48
HMGCS1-201ENST00000325110 STARD5Q9NSY2 213 aa12.02□□□□□ -0.48
HMGCS1-201ENST00000325110 ZNF443Q9Y2A4 671 aaPredicted RBP12.02□□□□□ -0.48
HMGCS1-201ENST00000325110 SLC27A6Q9Y2P4 619 aa12.02□□□□□ -0.48
HMGCS1-201ENST00000325110 ASB4Q9Y574 426 aa12.02□□□□□ -0.48
HMGCS1-201ENST00000325110 CDH10Q9Y6N8 788 aa12.02□□□□□ -0.48
HMGCS1-201ENST00000325110 XIRP2A4UGR9 3374 aa12.02□□□□□ -0.49
HMGCS1-201ENST00000325110 TRDV1A0A1B0GX56 115 aa12.02□□□□□ -0.49
HMGCS1-201ENST00000325110 HCN1O60741 890 aa12.02□□□□□ -0.49
HMGCS1-201ENST00000325110 PPP1R3DO95685 299 aa12.02□□□□□ -0.49
HMGCS1-201ENST00000325110 DHFRP00374 187 aa12.02□□□□□ -0.49
HMGCS1-201ENST00000325110 ENDOUP21128 410 aaKnown RBP12.02□□□□□ -0.49
HMGCS1-201ENST00000325110 FAPQ12884 760 aa12.02□□□□□ -0.49
HMGCS1-201ENST00000325110 TMEM52BQ4KMG9 183 aa12.02□□□□□ -0.49
HMGCS1-201ENST00000325110 LUZP2Q86TE4 346 aa12.02□□□□□ -0.49
HMGCS1-201ENST00000325110 AMIGO1Q86WK6 493 aa12.02□□□□□ -0.49
HMGCS1-201ENST00000325110 SIX5Q8N196 739 aa12.02□□□□□ -0.49
HMGCS1-201ENST00000325110 OR4M1Q8NGD0 313 aa12.02□□□□□ -0.49
HMGCS1-201ENST00000325110 DIO2Q92813 273 aa12.02□□□□□ -0.49
HMGCS1-201ENST00000325110 SMARCD2Q92925 531 aa12.02□□□□□ -0.49
HMGCS1-201ENST00000325110 ATF6BQ99941 703 aa12.02□□□□□ -0.49
HMGCS1-201ENST00000325110 CCDC3Q9BQI4 270 aa12.02□□□□□ -0.49
HMGCS1-201ENST00000325110 BRD7Q9NPI1 651 aa12.02□□□□□ -0.49
HMGCS1-201ENST00000325110 ACAD8Q9UKU7 415 aa12.02□□□□□ -0.49
HMGCS1-201ENST00000325110 NCKAP1Q9Y2A7 1128 aa12.02□□□□□ -0.49
HMGCS1-201ENST00000325110 CHST2Q9Y4C5 530 aa12.02□□□□□ -0.49
HMGCS1-201ENST00000325110 MAU2Q9Y6X3 613 aa12.02□□□□□ -0.49
HMGCS1-201ENST00000325110 A0A1W2PQ72 361 aa12.02□□□□□ -0.49
HMGCS1-201ENST00000325110 MEN1O00255 615 aa12.02□□□□□ -0.49
HMGCS1-201ENST00000325110 SURF4O15260 269 aa12.02□□□□□ -0.49
HMGCS1-201ENST00000325110 OR10H2O60403 315 aa12.02□□□□□ -0.49
HMGCS1-201ENST00000325110 RGS9O75916 674 aaPredicted RBP12.02□□□□□ -0.49
HMGCS1-201ENST00000325110 ACSL1P33121 698 aa12.02□□□□□ -0.49
HMGCS1-201ENST00000325110 STAT5AP42229 794 aa12.02□□□□□ -0.49
HMGCS1-201ENST00000325110 GNG2P59768 71 aa12.02□□□□□ -0.49
HMGCS1-201ENST00000325110 TP53I3Q53FA7 332 aa12.02□□□□□ -0.49
HMGCS1-201ENST00000325110 TANGO2Q6ICL3 276 aa12.02□□□□□ -0.49
HMGCS1-201ENST00000325110 ZNF322Q6U7Q0 402 aaPredicted RBP12.02□□□□□ -0.49
HMGCS1-201ENST00000325110 ZNF620Q6ZNG0 422 aa12.02□□□□□ -0.49
HMGCS1-201ENST00000325110 NUDT18Q6ZVK8 323 aa12.02□□□□□ -0.49
HMGCS1-201ENST00000325110 HCAR2Q8TDS4 363 aa12.02□□□□□ -0.49
HMGCS1-201ENST00000325110 ZMYND19Q96E35 227 aaPredicted RBP12.02□□□□□ -0.49
HMGCS1-201ENST00000325110 C4orf36Q96KX1 117 aa12.02□□□□□ -0.49
HMGCS1-201ENST00000325110 FAM83CQ9BQN1 747 aa12.02□□□□□ -0.49
HMGCS1-201ENST00000325110 FBXL4Q9UKA2 621 aa12.02□□□□□ -0.49
HMGCS1-201ENST00000325110 ADAM29Q9UKF5 820 aa12.02□□□□□ -0.49
HMGCS1-201ENST00000325110 GRXCR1A8MXD5 290 aa12.01□□□□□ -0.49
HMGCS1-201ENST00000325110 H0Y8X5 98 aa12.01□□□□□ -0.49
HMGCS1-201ENST00000325110 TEAD1P28347 426 aa12.01□□□□□ -0.49
HMGCS1-201ENST00000325110 ERP29P30040 261 aaKnown RBP12.01□□□□□ -0.49
HMGCS1-201ENST00000325110 GDI1P31150 447 aa12.01□□□□□ -0.49
HMGCS1-201ENST00000325110 DRD3P35462 400 aa12.01□□□□□ -0.49
HMGCS1-201ENST00000325110 EVX1P49640 407 aa12.01□□□□□ -0.49
HMGCS1-201ENST00000325110 PRMT2P55345 433 aa12.01□□□□□ -0.49
HMGCS1-201ENST00000325110 BNC1Q01954 994 aa12.01□□□□□ -0.49
HMGCS1-201ENST00000325110 EFR3AQ14156 821 aa12.01□□□□□ -0.49
HMGCS1-201ENST00000325110 NTRK2Q16620 822 aa12.01□□□□□ -0.49
HMGCS1-201ENST00000325110 GXYLT1Q4G148 440 aa12.01□□□□□ -0.49
HMGCS1-201ENST00000325110 MRPL2Q5T653 305 aaKnown RBP12.01□□□□□ -0.49
HMGCS1-201ENST00000325110 PPP2R2DQ66LE6 453 aa12.01□□□□□ -0.49
HMGCS1-201ENST00000325110 LYPD8Q6UX82 237 aa12.01□□□□□ -0.49
HMGCS1-201ENST00000325110 PARGQ86W56 976 aa12.01□□□□□ -0.49
HMGCS1-201ENST00000325110 OR5W2Q8NH69 310 aa12.01□□□□□ -0.49
HMGCS1-201ENST00000325110 CCL4L1Q8NHW4 92 aa12.01□□□□□ -0.49
HMGCS1-201ENST00000325110 TRMT10AQ8TBZ6 339 aaKnown RBP12.01□□□□□ -0.49
HMGCS1-201ENST00000325110 HHIPL1Q96JK4 782 aa12.01□□□□□ -0.49
HMGCS1-201ENST00000325110 COQ7Q99807 217 aa12.01□□□□□ -0.49
HMGCS1-201ENST00000325110 THAP7Q9BT49 309 aaPredicted RBP12.01□□□□□ -0.49
HMGCS1-201ENST00000325110 HCAR1Q9BXC0 346 aa12.01□□□□□ -0.49
HMGCS1-201ENST00000325110 BCL2L10Q9HD36 194 aa12.01□□□□□ -0.49
HMGCS1-201ENST00000325110 C20orf141Q9NUB4 165 aa12.01□□□□□ -0.49
HMGCS1-201ENST00000325110 FBXO34Q9NWN3 711 aa12.01□□□□□ -0.49
HMGCS1-201ENST00000325110 BABAM2Q9NXR7 383 aa12.01□□□□□ -0.49
HMGCS1-201ENST00000325110 CXorf51AA0A1B0GTR3 108 aa12.01□□□□□ -0.49
HMGCS1-201ENST00000325110 RNF13O43567 381 aa12.01□□□□□ -0.49
HMGCS1-201ENST00000325110 BMP8BP34820 402 aa12.01□□□□□ -0.49
HMGCS1-201ENST00000325110 GABRA3P34903 492 aa12.01□□□□□ -0.49
HMGCS1-201ENST00000325110 EVI2BP34910 448 aa12.01□□□□□ -0.49
HMGCS1-201ENST00000325110 GJA4P35212 333 aa12.01□□□□□ -0.49
HMGCS1-201ENST00000325110 OMPP47874 163 aa12.01□□□□□ -0.49
HMGCS1-201ENST00000325110 ATP12AP54707 1039 aa12.01□□□□□ -0.49
HMGCS1-201ENST00000325110 ZNF658BQ4V348 819 aaPredicted RBP12.01□□□□□ -0.49
HMGCS1-201ENST00000325110 PRRT3Q5FWE3 981 aa12.01□□□□□ -0.49
HMGCS1-201ENST00000325110 KIAA1324Q6UXG2 1013 aaKnown RBP12.01□□□□□ -0.49
HMGCS1-201ENST00000325110 RNF44Q7L0R7 432 aa12.01□□□□□ -0.49
HMGCS1-201ENST00000325110 BMP8AQ7Z5Y6 402 aa12.01□□□□□ -0.49
HMGCS1-201ENST00000325110 KIAA0907Q7Z7F0 614 aaPredicted RBP12.01□□□□□ -0.49
HMGCS1-201ENST00000325110 ASPGQ86U10 573 aa12.01□□□□□ -0.49
HMGCS1-201ENST00000325110 OR4K13Q8NH42 304 aa12.01□□□□□ -0.49
HMGCS1-201ENST00000325110 AKAP1Q92667 903 aaKnown RBP eCLIP12.01□□□□□ -0.49
HMGCS1-201ENST00000325110 RAB7BQ96AH8 199 aa12.01□□□□□ -0.49
HMGCS1-201ENST00000325110 ORAI1Q96D31 301 aa12.01□□□□□ -0.49
HMGCS1-201ENST00000325110 PTCHD1Q96NR3 888 aa12.01□□□□□ -0.49
HMGCS1-201ENST00000325110 CHIAQ9BZP6 476 aa12.01□□□□□ -0.49
HMGCS1-201ENST00000325110 ENKD1Q9H0I2 346 aa12.01□□□□□ -0.49
HMGCS1-201ENST00000325110 FGF22Q9HCT0 170 aa12.01□□□□□ -0.49
HMGCS1-201ENST00000325110 FGF20Q9NP95 211 aaPredicted RBP12.01□□□□□ -0.49
HMGCS1-201ENST00000325110 SIDT1Q9NXL6 827 aaKnown RBP12.01□□□□□ -0.49
HMGCS1-201ENST00000325110 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms