RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 GLTPQ9NZD2 209 aa7.48□□□□□ -1.21
CIITA-201ENST00000324288 ZNFX1Q9P2E3 1918 aaKnown RBP7.48□□□□□ -1.21
CIITA-201ENST00000324288 SURF4O15260 269 aa7.47□□□□□ -1.21
CIITA-201ENST00000324288 KDELR3O43731 214 aa7.47□□□□□ -1.21
CIITA-201ENST00000324288 CASP6P55212 293 aa7.47□□□□□ -1.21
CIITA-201ENST00000324288 FAM111BQ6SJ93 734 aa7.47□□□□□ -1.21
CIITA-201ENST00000324288 OR52P1PQ8NH57 321 aa7.47□□□□□ -1.21
CIITA-201ENST00000324288 ACOT11Q8WXI4 607 aaPredicted RBP7.47□□□□□ -1.21
CIITA-201ENST00000324288 GCDHQ92947 438 aaPredicted RBP7.47□□□□□ -1.21
CIITA-201ENST00000324288 CCDC74BQ96LY2 380 aa7.47□□□□□ -1.21
CIITA-201ENST00000324288 NECTIN4Q96NY8 510 aa7.47□□□□□ -1.21
CIITA-201ENST00000324288 DZANK1Q9NVP4 752 aa7.47□□□□□ -1.21
CIITA-201ENST00000324288 ASB4Q9Y574 426 aa7.47□□□□□ -1.21
CIITA-201ENST00000324288 M0R3H8 397 aa7.47□□□□□ -1.21
CIITA-201ENST00000324288 FKBP1BP68106 108 aa7.47□□□□□ -1.21
CIITA-201ENST00000324288 GALNT2Q10471 571 aa7.47□□□□□ -1.21
CIITA-201ENST00000324288 CLVS2Q5SYC1 327 aa7.47□□□□□ -1.21
CIITA-201ENST00000324288 UNQ6126/PRO20091Q6UXV3 157 aa7.47□□□□□ -1.21
CIITA-201ENST00000324288 ZNF695Q8IW36 515 aa7.47□□□□□ -1.21
CIITA-201ENST00000324288 CHPT1Q8WUD6 406 aa7.47□□□□□ -1.21
CIITA-201ENST00000324288 PATZ1Q9HBE1 687 aaKnown RBP7.47□□□□□ -1.21
CIITA-201ENST00000324288 F5H5K5 113 aa7.47□□□□□ -1.21
CIITA-201ENST00000324288 SCO1O75880 301 aa7.47□□□□□ -1.21
CIITA-201ENST00000324288 ITGB2P05107 769 aa7.47□□□□□ -1.21
CIITA-201ENST00000324288 BMP4P12644 408 aa7.47□□□□□ -1.21
CIITA-201ENST00000324288 C21orf62-AS1Q17RA5 79 aa7.47□□□□□ -1.21
CIITA-201ENST00000324288 PAN3Q58A45 887 aaKnown RBP7.47□□□□□ -1.21
CIITA-201ENST00000324288 TMEM41BQ5BJD5 291 aa7.47□□□□□ -1.21
CIITA-201ENST00000324288 STEAP3Q658P3 488 aa7.47□□□□□ -1.21
CIITA-201ENST00000324288 PLAG1Q6DJT9 500 aa7.47□□□□□ -1.21
CIITA-201ENST00000324288 PRSS48Q7RTY5 328 aa7.47□□□□□ -1.21
CIITA-201ENST00000324288 ZNF551Q7Z340 670 aaPredicted RBP7.47□□□□□ -1.21
CIITA-201ENST00000324288 ZDHHC12Q96GR4 267 aa7.47□□□□□ -1.21
CIITA-201ENST00000324288 SLC45A3Q96JT2 553 aa7.47□□□□□ -1.21
CIITA-201ENST00000324288 NTMT1Q9BV86 223 aa7.47□□□□□ -1.21
CIITA-201ENST00000324288 IGLV3-22A0A075B6J6 115 aa7.47□□□□□ -1.21
CIITA-201ENST00000324288 TYROBPO43914 113 aa7.47□□□□□ -1.21
CIITA-201ENST00000324288 SNAPINO95295 136 aa7.47□□□□□ -1.21
CIITA-201ENST00000324288 PRSS56P0CW18 603 aa7.47□□□□□ -1.21
CIITA-201ENST00000324288 TRIM61Q5EBN2 209 aa7.47□□□□□ -1.21
CIITA-201ENST00000324288 C3orf38Q5JPI3 329 aa7.47□□□□□ -1.21
CIITA-201ENST00000324288 METAP1DQ6UB28 335 aaPredicted RBP7.47□□□□□ -1.21
CIITA-201ENST00000324288 ZNF578Q96N58 590 aaPredicted RBP7.47□□□□□ -1.21
CIITA-201ENST00000324288 CPNE5Q9HCH3 593 aa7.47□□□□□ -1.21
CIITA-201ENST00000324288 GAB2Q9UQC2 676 aa7.47□□□□□ -1.21
CIITA-201ENST00000324288 CTXN1P60606 82 aa7.47□□□□□ -1.21
CIITA-201ENST00000324288 SF3A2Q15428 464 aaKnown RBP7.47□□□□□ -1.21
CIITA-201ENST00000324288 OGFOD3Q6PK18 319 aa7.47□□□□□ -1.21
CIITA-201ENST00000324288 NIPA2Q8N8Q9 360 aa7.47□□□□□ -1.21
CIITA-201ENST00000324288 NT5C3BQ969T7 300 aa7.47□□□□□ -1.21
CIITA-201ENST00000324288 SHDQ96IW2 340 aa7.47□□□□□ -1.21
CIITA-201ENST00000324288 TMEM235A6NFC5 223 aa7.47□□□□□ -1.21
CIITA-201ENST00000324288 PRAMEF11O60813 436 aa7.47□□□□□ -1.21
CIITA-201ENST00000324288 GJB5O95377 273 aa7.47□□□□□ -1.21
CIITA-201ENST00000324288 SLC35E2BP0CK96 405 aa7.47□□□□□ -1.21
CIITA-201ENST00000324288 LAMP1P11279 417 aa7.47□□□□□ -1.21
CIITA-201ENST00000324288 IL1RNP18510 177 aa7.47□□□□□ -1.21
CIITA-201ENST00000324288 PRSS3P35030 304 aa7.47□□□□□ -1.21
CIITA-201ENST00000324288 OR14L1PQ8NHC6 308 aa7.47□□□□□ -1.21
CIITA-201ENST00000324288 ZNF416Q9BWM5 594 aa7.47□□□□□ -1.21
CIITA-201ENST00000324288 VSX1Q9NZR4 365 aaPredicted RBP7.47□□□□□ -1.21
CIITA-201ENST00000324288 INSL5Q9Y5Q6 135 aa7.47□□□□□ -1.21
CIITA-201ENST00000324288 A0A0U1RQS6 177 aa7.47□□□□□ -1.21
CIITA-201ENST00000324288 TEX51A0A1B0GUA7 166 aa7.47□□□□□ -1.21
CIITA-201ENST00000324288 ZNF736B4DX44 427 aaPredicted RBP7.47□□□□□ -1.21
CIITA-201ENST00000324288 H3BUI4 141 aa7.47□□□□□ -1.21
CIITA-201ENST00000324288 TO15178 435 aa7.47□□□□□ -1.21
CIITA-201ENST00000324288 RAB3DO95716 219 aa7.47□□□□□ -1.21
CIITA-201ENST00000324288 POLR2HP52434 150 aaKnown RBP7.47□□□□□ -1.21
CIITA-201ENST00000324288 DHCR24Q15392 516 aa7.47□□□□□ -1.21
CIITA-201ENST00000324288 SLC22A6Q4U2R8 563 aa7.47□□□□□ -1.21
CIITA-201ENST00000324288 PLAC9Q5JTB6 97 aa7.47□□□□□ -1.21
CIITA-201ENST00000324288 SLC6A19Q695T7 634 aa7.47□□□□□ -1.21
CIITA-201ENST00000324288 NIPAL3Q6P499 406 aa7.47□□□□□ -1.21
CIITA-201ENST00000324288 ZFAND4Q86XD8 727 aa7.47□□□□□ -1.21
CIITA-201ENST00000324288 FAM160A2Q8N612 972 aaPredicted RBP7.47□□□□□ -1.21
CIITA-201ENST00000324288 ZNF610Q8N9Z0 462 aa7.47□□□□□ -1.21
CIITA-201ENST00000324288 OR10K1Q8NGX5 313 aa7.47□□□□□ -1.21
CIITA-201ENST00000324288 ZNF75AQ96N20 296 aa7.47□□□□□ -1.21
CIITA-201ENST00000324288 ZNF599Q96NL3 588 aa7.47□□□□□ -1.21
CIITA-201ENST00000324288 POLHQ9Y253 713 aa7.47□□□□□ -1.21
CIITA-201ENST00000324288 INSL6Q9Y581 213 aa7.47□□□□□ -1.21
CIITA-201ENST00000324288 CTDSP2O14595 271 aa7.47□□□□□ -1.21
CIITA-201ENST00000324288 SLC16A5O15375 505 aa7.47□□□□□ -1.21
CIITA-201ENST00000324288 NUDT21O43809 227 aaKnown RBP7.47□□□□□ -1.21
CIITA-201ENST00000324288 GGT1P19440 569 aa7.47□□□□□ -1.21
CIITA-201ENST00000324288 UBE2NP61088 152 aaKnown RBP7.47□□□□□ -1.21
CIITA-201ENST00000324288 SFRP5Q5T4F7 317 aa7.47□□□□□ -1.21
CIITA-201ENST00000324288 TPRG1Q6ZUI0 275 aa7.47□□□□□ -1.21
CIITA-201ENST00000324288 C6orf120Q7Z4R8 191 aa7.47□□□□□ -1.21
CIITA-201ENST00000324288 MIB2Q96AX9 1013 aa7.47□□□□□ -1.21
CIITA-201ENST00000324288 SIGLEC10Q96LC7 697 aa7.47□□□□□ -1.21
CIITA-201ENST00000324288 RDH14Q9HBH5 336 aa7.47□□□□□ -1.21
CIITA-201ENST00000324288 SULT1C4O75897 302 aa7.47□□□□□ -1.21
CIITA-201ENST00000324288 FGF18O76093 207 aa7.47□□□□□ -1.21
CIITA-201ENST00000324288 RIDAP52758 137 aaKnown RBP7.47□□□□□ -1.21
CIITA-201ENST00000324288 HOXC5Q00444 222 aa7.47□□□□□ -1.21
CIITA-201ENST00000324288 AKR1C1Q04828 323 aa7.47□□□□□ -1.21
CIITA-201ENST00000324288 ILKQ13418 452 aa7.47□□□□□ -1.21
CIITA-201ENST00000324288 NSDHLQ15738 373 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms