RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 PDX1P52945 283 aa7.22□□□□□ -1.25
CNOT4-201ENST00000315544 CSTF1Q05048 431 aaKnown RBP7.22□□□□□ -1.25
CNOT4-201ENST00000315544 CRMP1Q14194 572 aa7.22□□□□□ -1.25
CNOT4-201ENST00000315544 GALEQ14376 348 aa7.22□□□□□ -1.25
CNOT4-201ENST00000315544 C10orf91Q5T1B1 145 aa7.22□□□□□ -1.25
CNOT4-201ENST00000315544 PARGQ86W56 976 aa7.22□□□□□ -1.25
CNOT4-201ENST00000315544 TRAPPC5Q8IUR0 188 aa7.22□□□□□ -1.25
CNOT4-201ENST00000315544 SLC22A18ASQ8N1D0 253 aa7.22□□□□□ -1.25
CNOT4-201ENST00000315544 VWA5B2Q8N398 1253 aa7.22□□□□□ -1.25
CNOT4-201ENST00000315544 IQCF1Q8N6M8 205 aa7.22□□□□□ -1.25
CNOT4-201ENST00000315544 ZNF366Q8N895 744 aa7.22□□□□□ -1.25
CNOT4-201ENST00000315544 UXS1Q8NBZ7 420 aa7.22□□□□□ -1.25
CNOT4-201ENST00000315544 OR2L3Q8NG85 312 aa7.22□□□□□ -1.25
CNOT4-201ENST00000315544 OR5AK3PQ8NH89 298 aa7.22□□□□□ -1.25
CNOT4-201ENST00000315544 UTP15Q8TED0 518 aaKnown RBP7.22□□□□□ -1.25
CNOT4-201ENST00000315544 PMM1Q92871 262 aa7.22□□□□□ -1.25
CNOT4-201ENST00000315544 TMCO6Q96DC7 493 aa7.22□□□□□ -1.25
CNOT4-201ENST00000315544 ZHX1-C8orf76Q96EF9 292 aa7.22□□□□□ -1.25
CNOT4-201ENST00000315544 C16orf58Q96GQ5 468 aa7.22□□□□□ -1.25
CNOT4-201ENST00000315544 IL17FQ96PD4 163 aa7.22□□□□□ -1.25
CNOT4-201ENST00000315544 OR7D2Q96RA2 312 aa7.22□□□□□ -1.25
CNOT4-201ENST00000315544 TSSK6Q9BXA6 273 aa7.22□□□□□ -1.25
CNOT4-201ENST00000315544 ELOVL6Q9H5J4 265 aa7.22□□□□□ -1.25
CNOT4-201ENST00000315544 C14orf119Q9NWQ9 140 aa7.22□□□□□ -1.25
CNOT4-201ENST00000315544 PLSCR5A0PG75 271 aa7.22□□□□□ -1.25
CNOT4-201ENST00000315544 TBX1O43435 398 aa7.22□□□□□ -1.25
CNOT4-201ENST00000315544 GADD45GO95257 159 aa7.22□□□□□ -1.25
CNOT4-201ENST00000315544 PRG2P13727 222 aa7.22□□□□□ -1.25
CNOT4-201ENST00000315544 IGFBP3P17936 291 aaPredicted RBP7.22□□□□□ -1.25
CNOT4-201ENST00000315544 NNMTP40261 264 aa7.22□□□□□ -1.25
CNOT4-201ENST00000315544 OLR1P78380 273 aa7.22□□□□□ -1.25
CNOT4-201ENST00000315544 PSG6Q00889 435 aa7.22□□□□□ -1.25
CNOT4-201ENST00000315544 PLA2G7Q13093 441 aa7.22□□□□□ -1.25
CNOT4-201ENST00000315544 RUNX2Q13950 521 aa7.22□□□□□ -1.25
CNOT4-201ENST00000315544 ZNF234Q14588 700 aa7.22□□□□□ -1.25
CNOT4-201ENST00000315544 ZNF141Q15928 474 aa7.22□□□□□ -1.25
CNOT4-201ENST00000315544 PERM1Q5SV97 790 aa7.22□□□□□ -1.25
CNOT4-201ENST00000315544 OLFML2AQ68BL7 652 aa7.22□□□□□ -1.25
CNOT4-201ENST00000315544 C18orf63Q68DL7 685 aa7.22□□□□□ -1.25
CNOT4-201ENST00000315544 MFSD12Q6NUT3 480 aa7.22□□□□□ -1.25
CNOT4-201ENST00000315544 DTX1Q86Y01 620 aa7.22□□□□□ -1.25
CNOT4-201ENST00000315544 SIX5Q8N196 739 aa7.22□□□□□ -1.25
CNOT4-201ENST00000315544 F2RL3Q96RI0 385 aa7.22□□□□□ -1.25
CNOT4-201ENST00000315544 ROGDIQ9GZN7 287 aa7.22□□□□□ -1.25
CNOT4-201ENST00000315544 OR51I1Q9H343 314 aa7.22□□□□□ -1.25
CNOT4-201ENST00000315544 RANGRFQ9HD47 186 aaPredicted RBP7.22□□□□□ -1.25
CNOT4-201ENST00000315544 FITM1A5D6W6 292 aa7.21□□□□□ -1.25
CNOT4-201ENST00000315544 A8MX80 341 aa7.21□□□□□ -1.25
CNOT4-201ENST00000315544 IRF1P10914 325 aa7.21□□□□□ -1.25
CNOT4-201ENST00000315544 SDC2P34741 201 aa7.21□□□□□ -1.25
CNOT4-201ENST00000315544 PTGS2P35354 604 aa7.21□□□□□ -1.25
CNOT4-201ENST00000315544 P2RX3P56373 397 aa7.21□□□□□ -1.25
CNOT4-201ENST00000315544 FAPQ12884 760 aa7.21□□□□□ -1.25
CNOT4-201ENST00000315544 GSG1Q2KHT4 349 aa7.21□□□□□ -1.25
CNOT4-201ENST00000315544 ITPRIPL2Q3MIP1 535 aa7.21□□□□□ -1.25
CNOT4-201ENST00000315544 CCDC58Q4VC31 144 aa7.21□□□□□ -1.25
CNOT4-201ENST00000315544 KRT74Q7RTS7 529 aa7.21□□□□□ -1.25
CNOT4-201ENST00000315544 C1orf210Q8IVY1 113 aa7.21□□□□□ -1.25
CNOT4-201ENST00000315544 EIF4E3Q8N5X7 224 aaKnown RBP7.21□□□□□ -1.25
CNOT4-201ENST00000315544 CADM4Q8NFZ8 388 aa7.21□□□□□ -1.25
CNOT4-201ENST00000315544 OR4D9Q8NGE8 314 aa7.21□□□□□ -1.25
CNOT4-201ENST00000315544 OR5M3Q8NGP4 307 aa7.21□□□□□ -1.25
CNOT4-201ENST00000315544 HPS1Q92902 700 aa7.21□□□□□ -1.25
CNOT4-201ENST00000315544 MCHR2Q969V1 340 aa7.21□□□□□ -1.25
CNOT4-201ENST00000315544 RBP7Q96R05 134 aa7.21□□□□□ -1.25
CNOT4-201ENST00000315544 SPON2Q9BUD6 331 aa7.21□□□□□ -1.25
CNOT4-201ENST00000315544 SCRT1Q9BWW7 348 aa7.21□□□□□ -1.25
CNOT4-201ENST00000315544 APOL5Q9BWW9 433 aa7.21□□□□□ -1.25
CNOT4-201ENST00000315544 CCDC86Q9H6F5 360 aaKnown RBP7.21□□□□□ -1.25
CNOT4-201ENST00000315544 GIMAP4Q9NUV9 329 aa7.21□□□□□ -1.25
CNOT4-201ENST00000315544 TOR4AQ9NXH8 423 aa7.21□□□□□ -1.25
CNOT4-201ENST00000315544 MRPS2Q9Y399 296 aaKnown RBP7.21□□□□□ -1.25
CNOT4-201ENST00000315544 CMAHPQ9Y471 501 aa7.21□□□□□ -1.25
CNOT4-201ENST00000315544 TMEM272A0A1B0GTI8 110 aa7.21□□□□□ -1.26
CNOT4-201ENST00000315544 BRINP1O60477 761 aa7.21□□□□□ -1.26
CNOT4-201ENST00000315544 RAB36O95755 333 aa7.21□□□□□ -1.26
CNOT4-201ENST00000315544 HNRNPCP07910 306 aaKnown RBP eCLIP7.21□□□□□ -1.26
CNOT4-201ENST00000315544 COL9A1P20849 921 aa7.21□□□□□ -1.26
CNOT4-201ENST00000315544 HIST1H1TP22492 207 aaPredicted RBP7.21□□□□□ -1.26
CNOT4-201ENST00000315544 ADPRHP54922 357 aa7.21□□□□□ -1.26
CNOT4-201ENST00000315544 RPE65Q16518 533 aa7.21□□□□□ -1.26
CNOT4-201ENST00000315544 NPSR1Q6W5P4 371 aa7.21□□□□□ -1.26
CNOT4-201ENST00000315544 ZNF557Q8N988 423 aaPredicted RBP7.21□□□□□ -1.26
CNOT4-201ENST00000315544 NPEPL1Q8NDH3 523 aa7.21□□□□□ -1.26
CNOT4-201ENST00000315544 TMEM255BQ8WV15 326 aa7.21□□□□□ -1.26
CNOT4-201ENST00000315544 KLK6Q92876 244 aa7.21□□□□□ -1.26
CNOT4-201ENST00000315544 DPH7Q9BTV6 452 aa7.21□□□□□ -1.26
CNOT4-201ENST00000315544 DNAJB12Q9NXW2 375 aaKnown RBP7.21□□□□□ -1.26
CNOT4-201ENST00000315544 C5AR2Q9P296 337 aa7.21□□□□□ -1.26
CNOT4-201ENST00000315544 FAF1Q9UNN5 650 aaPredicted RBP7.21□□□□□ -1.26
CNOT4-201ENST00000315544 SLC22A7Q9Y694 548 aa7.21□□□□□ -1.26
CNOT4-201ENST00000315544 FAM157AC9JC47 383 aa7.21□□□□□ -1.26
CNOT4-201ENST00000315544 NDUFA2O43678 99 aa7.21□□□□□ -1.26
CNOT4-201ENST00000315544 PAHP00439 452 aa7.21□□□□□ -1.26
CNOT4-201ENST00000315544 EGFP01133 1207 aa7.21□□□□□ -1.26
CNOT4-201ENST00000315544 NUDT1P36639 197 aa7.21□□□□□ -1.26
CNOT4-201ENST00000315544 LSM3P62310 102 aaKnown RBP7.21□□□□□ -1.26
CNOT4-201ENST00000315544 LRRC32Q14392 662 aa7.21□□□□□ -1.26
CNOT4-201ENST00000315544 LGALSLQ3ZCW2 172 aaPredicted RBP7.21□□□□□ -1.26
CNOT4-201ENST00000315544 PMS2CLQ68D20 193 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms