RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 C17orf105B2RV13 164 aa16.97■□□□□ 0.31
CCDC43-201ENST00000315286 M0R3G1 203 aa16.97■□□□□ 0.31
CCDC43-201ENST00000315286 ADAM11O75078 769 aa16.97■□□□□ 0.31
CCDC43-201ENST00000315286 INHBBP09529 407 aa16.97■□□□□ 0.31
CCDC43-201ENST00000315286 GALNSP34059 522 aa16.97■□□□□ 0.31
CCDC43-201ENST00000315286 MED22Q15528 200 aa16.97■□□□□ 0.31
CCDC43-201ENST00000315286 SLC30A6Q6NXT4 461 aa16.97■□□□□ 0.31
CCDC43-201ENST00000315286 ZNF620Q6ZNG0 422 aa16.97■□□□□ 0.31
CCDC43-201ENST00000315286 ZNF367Q7RTV3 350 aa16.97■□□□□ 0.31
CCDC43-201ENST00000315286 ARHGAP22Q7Z5H3 698 aa16.97■□□□□ 0.31
CCDC43-201ENST00000315286 TMEM163Q8TC26 289 aa16.97■□□□□ 0.31
CCDC43-201ENST00000315286 PTPMT1Q8WUK0 201 aaPredicted RBP16.97■□□□□ 0.31
CCDC43-201ENST00000315286 TMEM239Q8WW34 195 aa16.97■□□□□ 0.31
CCDC43-201ENST00000315286 IER2Q9BTL4 223 aa16.97■□□□□ 0.31
CCDC43-201ENST00000315286 OCEL1Q9H607 264 aa16.97■□□□□ 0.31
CCDC43-201ENST00000315286 TBC1D23Q9NUY8 699 aa16.97■□□□□ 0.31
CCDC43-201ENST00000315286 IL20RAQ9UHF4 553 aa16.97■□□□□ 0.31
CCDC43-201ENST00000315286 CLEC2DQ9UHP7 191 aa16.97■□□□□ 0.31
CCDC43-201ENST00000315286 CCDC163A0A0D9SF12 145 aa16.97■□□□□ 0.31
CCDC43-201ENST00000315286 EFCAB9A8MZ26 197 aa16.97■□□□□ 0.31
CCDC43-201ENST00000315286 PRKNO60260 465 aaPredicted RBP16.97■□□□□ 0.31
CCDC43-201ENST00000315286 GADD45AP24522 165 aa16.97■□□□□ 0.31
CCDC43-201ENST00000315286 HOXA6P31267 233 aa16.97■□□□□ 0.31
CCDC43-201ENST00000315286 GCGRP47871 477 aa16.97■□□□□ 0.31
CCDC43-201ENST00000315286 WDR74Q6RFH5 385 aaPredicted RBP16.97■□□□□ 0.31
CCDC43-201ENST00000315286 GRAMD2AQ8IUY3 354 aa16.97■□□□□ 0.31
CCDC43-201ENST00000315286 PFN4Q8NHR9 129 aa16.97■□□□□ 0.31
CCDC43-201ENST00000315286 CCDC74AQ96AQ1 378 aa16.97■□□□□ 0.31
CCDC43-201ENST00000315286 MVB12AQ96EY5 273 aa16.97■□□□□ 0.31
CCDC43-201ENST00000315286 SENP5Q96HI0 755 aaPredicted RBP16.97■□□□□ 0.31
CCDC43-201ENST00000315286 SLC38A2Q96QD8 506 aa16.97■□□□□ 0.31
CCDC43-201ENST00000315286 ZNF559Q9BR84 538 aa16.97■□□□□ 0.31
CCDC43-201ENST00000315286 PELOQ9BRX2 385 aaKnown RBP16.97■□□□□ 0.31
CCDC43-201ENST00000315286 PNO1Q9NRX1 252 aaKnown RBP16.97■□□□□ 0.31
CCDC43-201ENST00000315286 C20orf141Q9NUB4 165 aa16.97■□□□□ 0.31
CCDC43-201ENST00000315286 DNAJB12Q9NXW2 375 aaKnown RBP16.97■□□□□ 0.31
CCDC43-201ENST00000315286 GMEB2Q9UKD1 530 aa16.97■□□□□ 0.31
CCDC43-201ENST00000315286 CBLCQ9ULV8 474 aa16.97■□□□□ 0.31
CCDC43-201ENST00000315286 OR10H1Q9Y4A9 318 aa16.97■□□□□ 0.31
CCDC43-201ENST00000315286 NPIPB9F8W1W9 429 aa16.96■□□□□ 0.31
CCDC43-201ENST00000315286 AIREO43918 545 aa16.96■□□□□ 0.31
CCDC43-201ENST00000315286 CH25HO95992 272 aa16.96■□□□□ 0.31
CCDC43-201ENST00000315286 CSTF2P33240 577 aaKnown RBP eCLIP16.96■□□□□ 0.31
CCDC43-201ENST00000315286 GRK5P34947 590 aa16.96■□□□□ 0.31
CCDC43-201ENST00000315286 ACAA2P42765 397 aaKnown RBP16.96■□□□□ 0.31
CCDC43-201ENST00000315286 RGS6P49758 472 aa16.96■□□□□ 0.31
CCDC43-201ENST00000315286 BIKQ13323 160 aa16.96■□□□□ 0.31
CCDC43-201ENST00000315286 ZNF141Q15928 474 aa16.96■□□□□ 0.31
CCDC43-201ENST00000315286 MOGQ16653 247 aa16.96■□□□□ 0.31
CCDC43-201ENST00000315286 PRSS42Q7Z5A4 293 aa16.96■□□□□ 0.31
CCDC43-201ENST00000315286 GPR135Q8IZ08 494 aa16.96■□□□□ 0.31
CCDC43-201ENST00000315286 RNF113BQ8IZP6 322 aaKnown RBP16.96■□□□□ 0.31
CCDC43-201ENST00000315286 SLC34A3Q8N130 599 aa16.96■□□□□ 0.31
CCDC43-201ENST00000315286 BCORP1Q8N888 145 aa16.96■□□□□ 0.31
CCDC43-201ENST00000315286 ZNF321PQ8N8H1 164 aa16.96■□□□□ 0.31
CCDC43-201ENST00000315286 GRHL3Q8TE85 626 aa16.96■□□□□ 0.31
CCDC43-201ENST00000315286 TSLPQ969D9 159 aa16.96■□□□□ 0.31
CCDC43-201ENST00000315286 CLIP3Q96DZ5 547 aa16.96■□□□□ 0.31
CCDC43-201ENST00000315286 MGLLQ99685 303 aa16.96■□□□□ 0.31
CCDC43-201ENST00000315286 SH3GL3Q99963 347 aa16.96■□□□□ 0.31
CCDC43-201ENST00000315286 NDC1Q9BTX1 674 aa16.96■□□□□ 0.31
CCDC43-201ENST00000315286 G6PC3Q9BUM1 346 aa16.96■□□□□ 0.31
CCDC43-201ENST00000315286 DPH1Q9BZG8 443 aa16.96■□□□□ 0.31
CCDC43-201ENST00000315286 TMEM27Q9HBJ8 222 aa16.96■□□□□ 0.31
CCDC43-201ENST00000315286 KRCC1Q9NPI7 259 aaPredicted RBP16.96■□□□□ 0.31
CCDC43-201ENST00000315286 ATP13A2Q9NQ11 1180 aa16.96■□□□□ 0.31
CCDC43-201ENST00000315286 FSCN3Q9NQT6 498 aa16.96■□□□□ 0.31
CCDC43-201ENST00000315286 FLRT3Q9NZU0 649 aa16.96■□□□□ 0.31
CCDC43-201ENST00000315286 MMACHCQ9Y4U1 282 aa16.96■□□□□ 0.31
CCDC43-201ENST00000315286 FER1L5A0AVI2 2057 aa16.96■□□□□ 0.3
CCDC43-201ENST00000315286 A8MUA0 341 aa16.95■□□□□ 0.3
CCDC43-201ENST00000315286 CKMT1AP12532 417 aa16.95■□□□□ 0.3
CCDC43-201ENST00000315286 FUT1P19526 365 aa16.95■□□□□ 0.3
CCDC43-201ENST00000315286 MAKP20794 623 aa16.95■□□□□ 0.3
CCDC43-201ENST00000315286 ATP12AP54707 1039 aa16.95■□□□□ 0.3
CCDC43-201ENST00000315286 MINDY4Q4G0A6 757 aa16.95■□□□□ 0.3
CCDC43-201ENST00000315286 ZNF613Q6PF04 617 aa16.95■□□□□ 0.3
CCDC43-201ENST00000315286 SLCO6A1Q86UG4 719 aa16.95■□□□□ 0.3
CCDC43-201ENST00000315286 ZSCAN1Q8NBB4 408 aa16.95■□□□□ 0.3
CCDC43-201ENST00000315286 DYNC2LI1Q8TCX1 351 aa16.95■□□□□ 0.3
CCDC43-201ENST00000315286 SAMD8Q96LT4 415 aa16.95■□□□□ 0.3
CCDC43-201ENST00000315286 OR1F2PQ96R84 312 aa16.95■□□□□ 0.3
CCDC43-201ENST00000315286 PLGRKTQ9HBL7 147 aa16.95■□□□□ 0.3
CCDC43-201ENST00000315286 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.95■□□□□ 0.3
CCDC43-201ENST00000315286 C14orf105Q9NVL8 296 aa16.95■□□□□ 0.3
CCDC43-201ENST00000315286 SERTAD3Q9UJW9 196 aa16.95■□□□□ 0.3
CCDC43-201ENST00000315286 CDH10Q9Y6N8 788 aa16.95■□□□□ 0.3
CCDC43-201ENST00000315286 KPNA4O00629 521 aaPredicted RBP16.95■□□□□ 0.3
CCDC43-201ENST00000315286 IFI30P13284 250 aa16.95■□□□□ 0.3
CCDC43-201ENST00000315286 EPHA8P29322 1005 aaPredicted RBP16.95■□□□□ 0.3
CCDC43-201ENST00000315286 BMXP51813 675 aa16.95■□□□□ 0.3
CCDC43-201ENST00000315286 EFNA3P52797 238 aa16.95■□□□□ 0.3
CCDC43-201ENST00000315286 PRKCDQ05655 676 aa16.95■□□□□ 0.3
CCDC43-201ENST00000315286 FGFBP1Q14512 234 aa16.95■□□□□ 0.3
CCDC43-201ENST00000315286 PMS2CLQ68D20 193 aa16.95■□□□□ 0.3
CCDC43-201ENST00000315286 MED25Q71SY5 747 aa16.95■□□□□ 0.3
CCDC43-201ENST00000315286 KANSL1Q7Z3B3 1105 aa16.95■□□□□ 0.3
CCDC43-201ENST00000315286 OR52I1Q8NGK6 324 aa16.95■□□□□ 0.3
CCDC43-201ENST00000315286 OR4C3Q8NH37 302 aa16.95■□□□□ 0.3
CCDC43-201ENST00000315286 EVA1AQ9H8M9 152 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms