RNA–Protein interactions for RNA: ENST00000314595.5

POLR2B-201, Transcript of RNA polymerase II subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR2B, Length 3,748 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2B-201ENST00000314595 FAM71CQ8NEG0 241 aa3.89□□□□□ -1.79
POLR2B-201ENST00000314595 IPMKQ8NFU5 416 aa3.89□□□□□ -1.79
POLR2B-201ENST00000314595 OR6S1Q8NH40 331 aa3.89□□□□□ -1.79
POLR2B-201ENST00000314595 ASB13Q8WXK3 278 aa3.89□□□□□ -1.79
POLR2B-201ENST00000314595 ZNF669Q96BR6 464 aaPredicted RBP3.89□□□□□ -1.79
POLR2B-201ENST00000314595 TEAD3Q99594 435 aa3.89□□□□□ -1.79
POLR2B-201ENST00000314595 C12orf57Q99622 126 aa3.89□□□□□ -1.79
POLR2B-201ENST00000314595 TIMP4Q99727 224 aa3.89□□□□□ -1.79
POLR2B-201ENST00000314595 C19orf43Q9BQ61 176 aa3.89□□□□□ -1.79
POLR2B-201ENST00000314595 COPS4Q9BT78 406 aa3.89□□□□□ -1.79
POLR2B-201ENST00000314595 KATNB1Q9BVA0 655 aa3.89□□□□□ -1.79
POLR2B-201ENST00000314595 CINPQ9BW66 212 aaPredicted RBP3.89□□□□□ -1.79
POLR2B-201ENST00000314595 REXO4Q9GZR2 422 aaKnown RBP3.89□□□□□ -1.79
POLR2B-201ENST00000314595 KLHL1Q9NR64 748 aa3.89□□□□□ -1.79
POLR2B-201ENST00000314595 PCDHB16Q9NRJ7 776 aa3.89□□□□□ -1.79
POLR2B-201ENST00000314595 HPF1Q9NWY4 346 aa3.89□□□□□ -1.79
POLR2B-201ENST00000314595 WARS2Q9UGM6 360 aaKnown RBP3.89□□□□□ -1.79
POLR2B-201ENST00000314595 CA5BQ9Y2D0 317 aa3.89□□□□□ -1.79
POLR2B-201ENST00000314595 GLYATL1P3A0A0U1RQE8 302 aa3.88□□□□□ -1.79
POLR2B-201ENST00000314595 CPED1A4D0V7 1026 aa3.88□□□□□ -1.79
POLR2B-201ENST00000314595 OR7A17O14581 309 aa3.88□□□□□ -1.79
POLR2B-201ENST00000314595 PRICKLE3O43900 615 aaPredicted RBP3.88□□□□□ -1.79
POLR2B-201ENST00000314595 PSIP1O75475 530 aaKnown RBP3.88□□□□□ -1.79
POLR2B-201ENST00000314595 PTBP3O95758 552 aaKnown RBP3.88□□□□□ -1.79
POLR2B-201ENST00000314595 ESR1P03372 595 aa3.88□□□□□ -1.79
POLR2B-201ENST00000314595 CAPN1P07384 714 aa3.88□□□□□ -1.79
POLR2B-201ENST00000314595 F7P08709 466 aaPredicted RBP3.88□□□□□ -1.79
POLR2B-201ENST00000314595 TIMP2P16035 220 aa3.88□□□□□ -1.79
POLR2B-201ENST00000314595 COL8A1P27658 744 aa3.88□□□□□ -1.79
POLR2B-201ENST00000314595 SOX6P35712 828 aa3.88□□□□□ -1.79
POLR2B-201ENST00000314595 IGFALSP35858 605 aa3.88□□□□□ -1.79
POLR2B-201ENST00000314595 PPP3R1P63098 170 aa3.88□□□□□ -1.79
POLR2B-201ENST00000314595 CHRNB3Q05901 458 aa3.88□□□□□ -1.79
POLR2B-201ENST00000314595 ZNF155Q12901 538 aaPredicted RBP3.88□□□□□ -1.79
POLR2B-201ENST00000314595 NFYCQ13952 458 aa3.88□□□□□ -1.79
POLR2B-201ENST00000314595 DEFB133Q30KQ1 61 aa3.88□□□□□ -1.79
POLR2B-201ENST00000314595 ZNF805Q5CZA5 627 aa3.88□□□□□ -1.79
POLR2B-201ENST00000314595 PRAMEF14Q5SWL7 426 aa3.88□□□□□ -1.79
POLR2B-201ENST00000314595 RPS27LQ71UM5 84 aaKnown RBP3.88□□□□□ -1.79
POLR2B-201ENST00000314595 EIF3MQ7L2H7 374 aaKnown RBP3.88□□□□□ -1.79
POLR2B-201ENST00000314595 KLBQ86Z14 1044 aa3.88□□□□□ -1.79
POLR2B-201ENST00000314595 PHC2Q8IXK0 858 aa3.88□□□□□ -1.79
POLR2B-201ENST00000314595 SYTL1Q8IYJ3 562 aa3.88□□□□□ -1.79
POLR2B-201ENST00000314595 ZNF540Q8NDQ6 660 aa3.88□□□□□ -1.79
POLR2B-201ENST00000314595 B3GNT7Q8NFL0 401 aa3.88□□□□□ -1.79
POLR2B-201ENST00000314595 OR2A12Q8NGT7 310 aa3.88□□□□□ -1.79
POLR2B-201ENST00000314595 TEX47Q8TBZ9 253 aa3.88□□□□□ -1.79
POLR2B-201ENST00000314595 GANCQ8TET4 914 aa3.88□□□□□ -1.79
POLR2B-201ENST00000314595 SELENOMQ8WWX9 145 aa3.88□□□□□ -1.79
POLR2B-201ENST00000314595 TM4SF18Q96CE8 201 aa3.88□□□□□ -1.79
POLR2B-201ENST00000314595 PIP5K1AQ99755 562 aa3.88□□□□□ -1.79
POLR2B-201ENST00000314595 ZNF251Q9BRH9 671 aa3.88□□□□□ -1.79
POLR2B-201ENST00000314595 FN3KQ9H479 309 aa3.88□□□□□ -1.79
POLR2B-201ENST00000314595 GALNT9Q9HCQ5 603 aa3.88□□□□□ -1.79
POLR2B-201ENST00000314595 FGF20Q9NP95 211 aaPredicted RBP3.88□□□□□ -1.79
POLR2B-201ENST00000314595 TXNL4BQ9NX01 149 aaKnown RBP3.88□□□□□ -1.79
POLR2B-201ENST00000314595 AASSQ9UDR5 926 aa3.88□□□□□ -1.79
POLR2B-201ENST00000314595 BTNL2Q9UIR0 455 aa3.88□□□□□ -1.79
POLR2B-201ENST00000314595 SCP2D1Q9UJQ7 156 aa3.88□□□□□ -1.79
POLR2B-201ENST00000314595 SLC39A10Q9ULF5 831 aa3.88□□□□□ -1.79
POLR2B-201ENST00000314595 TMCC3Q9ULS5 477 aa3.88□□□□□ -1.79
POLR2B-201ENST00000314595 GPR34Q9UPC5 381 aa3.88□□□□□ -1.79
POLR2B-201ENST00000314595 B3GALT1Q9Y5Z6 326 aa3.88□□□□□ -1.79
POLR2B-201ENST00000314595 SDK1Q7Z5N4 2213 aa3.88□□□□□ -1.79
POLR2B-201ENST00000314595 KCNE1BA0A087WTH5 132 aa3.88□□□□□ -1.79
POLR2B-201ENST00000314595 ELOVL7A1L3X0 281 aa3.88□□□□□ -1.79
POLR2B-201ENST00000314595 SMLR1H3BR10 107 aa3.88□□□□□ -1.79
POLR2B-201ENST00000314595 RFXANKO14593 260 aa3.88□□□□□ -1.79
POLR2B-201ENST00000314595 LYRM1O43325 122 aa3.88□□□□□ -1.79
POLR2B-201ENST00000314595 MMP20O60882 483 aa3.88□□□□□ -1.79
POLR2B-201ENST00000314595 TBL1XO60907 577 aa3.88□□□□□ -1.79
POLR2B-201ENST00000314595 PEX14O75381 377 aa3.88□□□□□ -1.79
POLR2B-201ENST00000314595 RECQL5O94762 991 aaPredicted RBP3.88□□□□□ -1.79
POLR2B-201ENST00000314595 AQP8O94778 261 aa3.88□□□□□ -1.79
POLR2B-201ENST00000314595 SOD1P00441 154 aa3.88□□□□□ -1.79
POLR2B-201ENST00000314595 LPLP06858 475 aa3.88□□□□□ -1.79
POLR2B-201ENST00000314595 ADRB3P13945 408 aa3.88□□□□□ -1.79
POLR2B-201ENST00000314595 ATF4P18848 351 aaPredicted RBP3.88□□□□□ -1.79
POLR2B-201ENST00000314595 MPGP29372 298 aa3.88□□□□□ -1.79
POLR2B-201ENST00000314595 RFC3P40938 356 aa3.88□□□□□ -1.79
POLR2B-201ENST00000314595 CCT3P49368 545 aaKnown RBP3.88□□□□□ -1.79
POLR2B-201ENST00000314595 MVDP53602 400 aa3.88□□□□□ -1.79
POLR2B-201ENST00000314595 KCNK10P57789 538 aa3.88□□□□□ -1.79
POLR2B-201ENST00000314595 LSM3P62310 102 aaKnown RBP3.88□□□□□ -1.79
POLR2B-201ENST00000314595 HGFACQ04756 655 aa3.88□□□□□ -1.79
POLR2B-201ENST00000314595 NR6A1Q15406 480 aa3.88□□□□□ -1.79
POLR2B-201ENST00000314595 SF1Q15637 639 aaKnown RBP3.88□□□□□ -1.79
POLR2B-201ENST00000314595 DEFB109BQ30KR1 87 aa3.88□□□□□ -1.79
POLR2B-201ENST00000314595 TIMM50Q3ZCQ8 353 aa3.88□□□□□ -1.79
POLR2B-201ENST00000314595 Q3ZCU0 254 aa3.88□□□□□ -1.79
POLR2B-201ENST00000314595 SYTL3Q4VX76 610 aa3.88□□□□□ -1.79
POLR2B-201ENST00000314595 BHLHB9Q6PI77 547 aa3.88□□□□□ -1.79
POLR2B-201ENST00000314595 CES3Q6UWW8 571 aa3.88□□□□□ -1.79
POLR2B-201ENST00000314595 Q6ZPB1 254 aaPredicted RBP3.88□□□□□ -1.79
POLR2B-201ENST00000314595 CFAP77Q6ZQR2 320 aa3.88□□□□□ -1.79
POLR2B-201ENST00000314595 MOB3CQ70IA8 216 aa3.88□□□□□ -1.79
POLR2B-201ENST00000314595 FGD2Q7Z6J4 655 aa3.88□□□□□ -1.79
POLR2B-201ENST00000314595 PIM3Q86V86 326 aa3.88□□□□□ -1.79
POLR2B-201ENST00000314595 GLCCI1Q86VQ1 547 aa3.88□□□□□ -1.79
POLR2B-201ENST00000314595 KRT73Q86Y46 540 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms