RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 ZNF117Q03924 483 aa13.15□□□□□ -0.3
PPP1CA-201ENST00000312989 SF3B4Q15427 424 aaKnown RBP eCLIP13.15□□□□□ -0.32e-6■■□□□ 11.7
PPP1CA-201ENST00000312989 SLC9B1Q4ZJI4 515 aa13.15□□□□□ -0.3
PPP1CA-201ENST00000312989 AGBL2Q5U5Z8 902 aa13.15□□□□□ -0.3
PPP1CA-201ENST00000312989 SAXO2Q658L1 398 aa13.15□□□□□ -0.3
PPP1CA-201ENST00000312989 HEPHL1Q6MZM0 1159 aa13.15□□□□□ -0.3
PPP1CA-201ENST00000312989 C6orf120Q7Z4R8 191 aa13.15□□□□□ -0.3
PPP1CA-201ENST00000312989 GCNT2Q8N0V5 402 aa13.15□□□□□ -0.3
PPP1CA-201ENST00000312989 GTPBP8Q8N3Z3 284 aaPredicted RBP13.15□□□□□ -0.3
PPP1CA-201ENST00000312989 METTL25Q8N6Q8 603 aa13.15□□□□□ -0.3
PPP1CA-201ENST00000312989 GOT1L1Q8NHS2 421 aaPredicted RBP13.15□□□□□ -0.3
PPP1CA-201ENST00000312989 ACTRT2Q8TDY3 377 aa13.15□□□□□ -0.3
PPP1CA-201ENST00000312989 RNASE6Q93091 150 aaKnown RBP13.15□□□□□ -0.3
PPP1CA-201ENST00000312989 MOAP1Q96BY2 351 aa13.15□□□□□ -0.3
PPP1CA-201ENST00000312989 ZNF845Q96IR2 970 aaPredicted RBP13.15□□□□□ -0.3
PPP1CA-201ENST00000312989 SDF2Q99470 211 aa13.15□□□□□ -0.3
PPP1CA-201ENST00000312989 PTGES2Q9H7Z7 377 aa13.15□□□□□ -0.3
PPP1CA-201ENST00000312989 MANSC1Q9H8J5 431 aa13.15□□□□□ -0.3
PPP1CA-201ENST00000312989 ARHGAP21Q5T5U3 1957 aa13.15□□□□□ -0.31
PPP1CA-201ENST00000312989 CELSR1Q9NYQ6 3014 aa13.14□□□□□ -0.31
PPP1CA-201ENST00000312989 GOLGA8QA0A0J9YX86 632 aa13.14□□□□□ -0.31
PPP1CA-201ENST00000312989 PRSS51A0A1B0GVH4 220 aa13.14□□□□□ -0.31
PPP1CA-201ENST00000312989 GOLGA8OA6NCC3 632 aa13.14□□□□□ -0.31
PPP1CA-201ENST00000312989 E9PBE3 544 aa13.14□□□□□ -0.31
PPP1CA-201ENST00000312989 GOLGA8NF8WBI6 632 aa13.14□□□□□ -0.31
PPP1CA-201ENST00000312989 EFNA2O43921 213 aa13.14□□□□□ -0.31
PPP1CA-201ENST00000312989 GMFGO60234 142 aa13.14□□□□□ -0.31
PPP1CA-201ENST00000312989 FCMRO60667 390 aa13.14□□□□□ -0.31
PPP1CA-201ENST00000312989 NTN1O95631 604 aa13.14□□□□□ -0.31
PPP1CA-201ENST00000312989 TMIGD3P0DMS9 266 aaPredicted RBP13.14□□□□□ -0.31
PPP1CA-201ENST00000312989 PEPDP12955 493 aa13.14□□□□□ -0.31
PPP1CA-201ENST00000312989 POU3F2P20265 443 aaPredicted RBP13.14□□□□□ -0.31
PPP1CA-201ENST00000312989 IL11P20809 199 aa13.14□□□□□ -0.31
PPP1CA-201ENST00000312989 GCKP35557 465 aa13.14□□□□□ -0.31
PPP1CA-201ENST00000312989 CDKN2CP42773 168 aa13.14□□□□□ -0.31
PPP1CA-201ENST00000312989 CLK3P49761 638 aaKnown RBP13.14□□□□□ -0.31
PPP1CA-201ENST00000312989 NDUFAF6Q330K2 333 aa13.14□□□□□ -0.31
PPP1CA-201ENST00000312989 FAM174BQ3ZCQ3 159 aa13.14□□□□□ -0.31
PPP1CA-201ENST00000312989 SPDYE7PQ495Y7 208 aa13.14□□□□□ -0.31
PPP1CA-201ENST00000312989 UBQLNLQ8IYU4 475 aa13.14□□□□□ -0.31
PPP1CA-201ENST00000312989 ADAMTS15Q8TE58 950 aa13.14□□□□□ -0.31
PPP1CA-201ENST00000312989 ZFP3Q96NJ6 502 aa13.14□□□□□ -0.31
PPP1CA-201ENST00000312989 CCDC115Q96NT0 180 aa13.14□□□□□ -0.31
PPP1CA-201ENST00000312989 OR52B2Q96RD2 323 aa13.14□□□□□ -0.31
PPP1CA-201ENST00000312989 PIGQQ9BRB3 760 aa13.14□□□□□ -0.31
PPP1CA-201ENST00000312989 SFXN3Q9BWM7 321 aa13.14□□□□□ -0.31
PPP1CA-201ENST00000312989 ZNF350Q9GZX5 532 aa13.14□□□□□ -0.31
PPP1CA-201ENST00000312989 RNF122Q9H9V4 155 aa13.14□□□□□ -0.31
PPP1CA-201ENST00000312989 CRIM1Q9NZV1 1036 aa13.14□□□□□ -0.31
PPP1CA-201ENST00000312989 FAF1Q9UNN5 650 aaPredicted RBP13.14□□□□□ -0.31
PPP1CA-201ENST00000312989 VDAC3Q9Y277 283 aa13.14□□□□□ -0.31
PPP1CA-201ENST00000312989 ANKHD1Q8IWZ3 2542 aaKnown RBP13.13□□□□□ -0.31
PPP1CA-201ENST00000312989 A0A1W2PNV4 684 aa13.13□□□□□ -0.31
PPP1CA-201ENST00000312989 H3BML4 177 aa13.13□□□□□ -0.31
PPP1CA-201ENST00000312989 LINC01387J3KSC0 135 aa13.13□□□□□ -0.31
PPP1CA-201ENST00000312989 ETV2O00321 342 aaPredicted RBP13.13□□□□□ -0.31
PPP1CA-201ENST00000312989 CFLARO15519 480 aa13.13□□□□□ -0.31
PPP1CA-201ENST00000312989 DNAJA2O60884 412 aa13.13□□□□□ -0.31
PPP1CA-201ENST00000312989 TNFRSF21O75509 655 aa13.13□□□□□ -0.31
PPP1CA-201ENST00000312989 KITP10721 976 aa13.13□□□□□ -0.31
PPP1CA-201ENST00000312989 H2AFXP16104 143 aaPredicted RBP13.13□□□□□ -0.31
PPP1CA-201ENST00000312989 SHC1P29353 583 aa13.13□□□□□ -0.31
PPP1CA-201ENST00000312989 OPRM1P35372 400 aa13.13□□□□□ -0.31
PPP1CA-201ENST00000312989 SOAT1P35610 550 aa13.13□□□□□ -0.31
PPP1CA-201ENST00000312989 DGKQP52824 942 aa13.13□□□□□ -0.31
PPP1CA-201ENST00000312989 ATP12AP54707 1039 aa13.13□□□□□ -0.31
PPP1CA-201ENST00000312989 CASP9P55211 416 aa13.13□□□□□ -0.31
PPP1CA-201ENST00000312989 NME5P56597 212 aa13.13□□□□□ -0.31
PPP1CA-201ENST00000312989 TOMM34Q15785 309 aaPredicted RBP13.13□□□□□ -0.31
PPP1CA-201ENST00000312989 SPATA19Q7Z5L4 167 aa13.13□□□□□ -0.31
PPP1CA-201ENST00000312989 MISPQ8IVT2 679 aa13.13□□□□□ -0.31
PPP1CA-201ENST00000312989 OR4A15Q8NGL6 344 aa13.13□□□□□ -0.31
PPP1CA-201ENST00000312989 ZNF75CPQ92670 426 aaPredicted RBP13.13□□□□□ -0.31
PPP1CA-201ENST00000312989 INTS12Q96CB8 462 aaKnown RBP13.13□□□□□ -0.31
PPP1CA-201ENST00000312989 NEURL3Q96EH8 262 aa13.13□□□□□ -0.31
PPP1CA-201ENST00000312989 DTNBP1Q96EV8 351 aa13.13□□□□□ -0.31
PPP1CA-201ENST00000312989 SH3YL1Q96HL8 342 aaPredicted RBP13.13□□□□□ -0.31
PPP1CA-201ENST00000312989 TM9SF2Q99805 663 aa13.13□□□□□ -0.31
PPP1CA-201ENST00000312989 INPP5KQ9BT40 448 aa13.13□□□□□ -0.31
PPP1CA-201ENST00000312989 OR51I1Q9H343 314 aa13.13□□□□□ -0.31
PPP1CA-201ENST00000312989 SLC6A13Q9NSD5 602 aa13.13□□□□□ -0.31
PPP1CA-201ENST00000312989 BTNL2Q9UIR0 455 aa13.13□□□□□ -0.31
PPP1CA-201ENST00000312989 AP4B1Q9Y6B7 739 aa13.13□□□□□ -0.31
PPP1CA-201ENST00000312989 A0A087WZY1 265 aa13.12□□□□□ -0.31
PPP1CA-201ENST00000312989 SCDO00767 359 aa13.12□□□□□ -0.31
PPP1CA-201ENST00000312989 SEC14L5O43304 696 aa13.12□□□□□ -0.31
PPP1CA-201ENST00000312989 BCAS1O75363 584 aaPredicted RBP13.12□□□□□ -0.31
PPP1CA-201ENST00000312989 UGT2B17O75795 530 aa13.12□□□□□ -0.31
PPP1CA-201ENST00000312989 AQP8O94778 261 aa13.12□□□□□ -0.31
PPP1CA-201ENST00000312989 CGAP01215 116 aa13.12□□□□□ -0.31
PPP1CA-201ENST00000312989 GUSBP08236 651 aa13.12□□□□□ -0.31
PPP1CA-201ENST00000312989 KRT16P08779 473 aa13.12□□□□□ -0.31
PPP1CA-201ENST00000312989 MATN1P21941 496 aa13.12□□□□□ -0.31
PPP1CA-201ENST00000312989 UQCRC2P22695 453 aa13.12□□□□□ -0.31
PPP1CA-201ENST00000312989 KIR2DL2P43627 348 aaPredicted RBP13.12□□□□□ -0.31
PPP1CA-201ENST00000312989 SLC6A8P48029 635 aa13.12□□□□□ -0.31
PPP1CA-201ENST00000312989 MVDP53602 400 aa13.12□□□□□ -0.31
PPP1CA-201ENST00000312989 CLNS1AP54105 237 aaKnown RBP13.12□□□□□ -0.31
PPP1CA-201ENST00000312989 ZNF141Q15928 474 aa13.12□□□□□ -0.31
PPP1CA-201ENST00000312989 MAPK14Q16539 360 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms