RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 PSMB9P28065 219 aa19.64■□□□□ 0.74
ATG4D-201ENST00000309469 EFNA3P52797 238 aa19.64■□□□□ 0.74
ATG4D-201ENST00000309469 ATP12AP54707 1039 aa19.64■□□□□ 0.74
ATG4D-201ENST00000309469 PSMD4P55036 377 aaKnown RBP19.64■□□□□ 0.74
ATG4D-201ENST00000309469 SLC37A1P57057 533 aa19.64■□□□□ 0.74
ATG4D-201ENST00000309469 ACY1Q03154 408 aa19.64■□□□□ 0.74
ATG4D-201ENST00000309469 ZSWIM7Q19AV6 140 aa19.64■□□□□ 0.74
ATG4D-201ENST00000309469 UBE2UQ5VVX9 321 aa19.64■□□□□ 0.74
ATG4D-201ENST00000309469 ZNF321PQ8N8H1 164 aa19.64■□□□□ 0.74
ATG4D-201ENST00000309469 OR2I1PQ8NGU4 316 aa19.64■□□□□ 0.74
ATG4D-201ENST00000309469 POLDIP3Q9BY77 421 aaKnown RBP19.64■□□□□ 0.74
ATG4D-201ENST00000309469 LRRN3Q9H3W5 708 aa19.64■□□□□ 0.74
ATG4D-201ENST00000309469 GPN2Q9H9Y4 310 aaPredicted RBP19.64■□□□□ 0.74
ATG4D-201ENST00000309469 TMEM27Q9HBJ8 222 aa19.64■□□□□ 0.74
ATG4D-201ENST00000309469 DNAJB12Q9NXW2 375 aaKnown RBP19.64■□□□□ 0.74
ATG4D-201ENST00000309469 CNOT2Q9NZN8 540 aaKnown RBP19.64■□□□□ 0.74
ATG4D-201ENST00000309469 CLCA3PQ9Y6N3 262 aa19.64■□□□□ 0.74
ATG4D-201ENST00000309469 TCRBV16S1A1N1A0A5B0 115 aa19.64■□□□□ 0.73
ATG4D-201ENST00000309469 TMX2-CTNND1H3BSU7 103 aa19.64■□□□□ 0.73
ATG4D-201ENST00000309469 HOXD12P35452 270 aa19.64■□□□□ 0.73
ATG4D-201ENST00000309469 GPR4P46093 362 aa19.64■□□□□ 0.73
ATG4D-201ENST00000309469 PCYT1AP49585 367 aa19.64■□□□□ 0.73
ATG4D-201ENST00000309469 ST13P50502 369 aaKnown RBP19.64■□□□□ 0.73
ATG4D-201ENST00000309469 FGFBP1Q14512 234 aa19.64■□□□□ 0.73
ATG4D-201ENST00000309469 CPEB4Q17RY0 729 aaKnown RBP eCLIP19.64■□□□□ 0.73
ATG4D-201ENST00000309469 ANKRD13BQ86YJ7 626 aa19.64■□□□□ 0.73
ATG4D-201ENST00000309469 RNF113BQ8IZP6 322 aaKnown RBP19.64■□□□□ 0.73
ATG4D-201ENST00000309469 ZSCAN1Q8NBB4 408 aa19.64■□□□□ 0.73
ATG4D-201ENST00000309469 CEP76Q8TAP6 659 aa19.64■□□□□ 0.73
ATG4D-201ENST00000309469 FCGR1BQ92637 280 aa19.64■□□□□ 0.73
ATG4D-201ENST00000309469 NAT6Q93015 286 aa19.64■□□□□ 0.73
ATG4D-201ENST00000309469 SLC46A1Q96NT5 459 aa19.64■□□□□ 0.73
ATG4D-201ENST00000309469 OR8D2Q9GZM6 311 aa19.64■□□□□ 0.73
ATG4D-201ENST00000309469 KRCC1Q9NPI7 259 aaPredicted RBP19.64■□□□□ 0.73
ATG4D-201ENST00000309469 MKKSQ9NPJ1 570 aaPredicted RBP19.64■□□□□ 0.73
ATG4D-201ENST00000309469 SRPK3Q9UPE1 567 aa19.64■□□□□ 0.73
ATG4D-201ENST00000309469 CACNA1EQ15878 2313 aa19.64■□□□□ 0.73
ATG4D-201ENST00000309469 PRKYO43930 277 aa19.63■□□□□ 0.73
ATG4D-201ENST00000309469 LCKP06239 509 aa19.63■□□□□ 0.73
ATG4D-201ENST00000309469 SLC15A1P46059 708 aa19.63■□□□□ 0.73
ATG4D-201ENST00000309469 ELAVL1Q15717 326 aaKnown RBP19.63■□□□□ 0.73
ATG4D-201ENST00000309469 TBCEQ15813 527 aaPredicted RBP19.63■□□□□ 0.73
ATG4D-201ENST00000309469 OCLNQ16625 522 aa19.63■□□□□ 0.73
ATG4D-201ENST00000309469 SLC27A4Q6P1M0 643 aa19.63■□□□□ 0.73
ATG4D-201ENST00000309469 ZNF613Q6PF04 617 aa19.63■□□□□ 0.73
ATG4D-201ENST00000309469 WDR88Q6ZMY6 472 aa19.63■□□□□ 0.73
ATG4D-201ENST00000309469 FAM26EQ8N5C1 309 aa19.63■□□□□ 0.73
ATG4D-201ENST00000309469 POGLUT1Q8NBL1 392 aa19.63■□□□□ 0.73
ATG4D-201ENST00000309469 OR8D4Q8NGM9 314 aa19.63■□□□□ 0.73
ATG4D-201ENST00000309469 YIPF6Q96EC8 236 aa19.63■□□□□ 0.73
ATG4D-201ENST00000309469 DNAJC27Q9NZQ0 273 aa19.63■□□□□ 0.73
ATG4D-201ENST00000309469 ENPP5Q9UJA9 477 aa19.63■□□□□ 0.73
ATG4D-201ENST00000309469 ARID1BQ8NFD5 2236 aaPredicted RBP19.63■□□□□ 0.73
ATG4D-201ENST00000309469 IGHV5-10-1A0A0J9YXX1 117 aa19.63■□□□□ 0.73
ATG4D-201ENST00000309469 TLX2O43763 284 aaPredicted RBP19.63■□□□□ 0.73
ATG4D-201ENST00000309469 DDAH2O95865 285 aa19.63■□□□□ 0.73
ATG4D-201ENST00000309469 IGKV3-11P04433 115 aa19.63■□□□□ 0.73
ATG4D-201ENST00000309469 RORAP35398 523 aa19.63■□□□□ 0.73
ATG4D-201ENST00000309469 ACAA2P42765 397 aaKnown RBP19.63■□□□□ 0.73
ATG4D-201ENST00000309469 PPICP45877 212 aa19.63■□□□□ 0.73
ATG4D-201ENST00000309469 EFNB1P98172 346 aa19.63■□□□□ 0.73
ATG4D-201ENST00000309469 NFATC3Q12968 1075 aa19.63■□□□□ 0.73
ATG4D-201ENST00000309469 NSDHLQ15738 373 aa19.63■□□□□ 0.73
ATG4D-201ENST00000309469 RHBDD2Q6NTF9 364 aa19.63■□□□□ 0.73
ATG4D-201ENST00000309469 SLC16A12Q6ZSM3 486 aa19.63■□□□□ 0.73
ATG4D-201ENST00000309469 TMEM105Q8N8V8 129 aa19.63■□□□□ 0.73
ATG4D-201ENST00000309469 RNF217Q8TC41 542 aa19.63■□□□□ 0.73
ATG4D-201ENST00000309469 SLC2A12Q8TD20 617 aa19.63■□□□□ 0.73
ATG4D-201ENST00000309469 TMEM239Q8WW34 195 aa19.63■□□□□ 0.73
ATG4D-201ENST00000309469 SLC7A5P2Q9GIP4 190 aa19.63■□□□□ 0.73
ATG4D-201ENST00000309469 ZNF223Q9UK11 482 aaPredicted RBP19.63■□□□□ 0.73
ATG4D-201ENST00000309469 FBXO4Q9UKT5 387 aa19.63■□□□□ 0.73
ATG4D-201ENST00000309469 CFL2Q9Y281 166 aa19.63■□□□□ 0.73
ATG4D-201ENST00000309469 ASXL3Q9C0F0 2248 aa19.62■□□□□ 0.73
ATG4D-201ENST00000309469 PIPP12273 146 aaPredicted RBP19.62■□□□□ 0.73
ATG4D-201ENST00000309469 SLC25A30Q5SVS4 291 aa19.62■□□□□ 0.73
ATG4D-201ENST00000309469 RABEPKQ7Z6M1 372 aa19.62■□□□□ 0.73
ATG4D-201ENST00000309469 MRGPREQ86SM8 312 aa19.62■□□□□ 0.73
ATG4D-201ENST00000309469 CMIPQ8IY22 773 aa19.62■□□□□ 0.73
ATG4D-201ENST00000309469 PRSS58Q8IYP2 241 aa19.62■□□□□ 0.73
ATG4D-201ENST00000309469 DTWD2Q8NBA8 298 aa19.62■□□□□ 0.73
ATG4D-201ENST00000309469 OR4C3Q8NH37 302 aa19.62■□□□□ 0.73
ATG4D-201ENST00000309469 ZNF721Q8TF20 911 aa19.62■□□□□ 0.73
ATG4D-201ENST00000309469 OSTF1Q92882 214 aa19.62■□□□□ 0.73
ATG4D-201ENST00000309469 SLC35B4Q969S0 331 aa19.62■□□□□ 0.73
ATG4D-201ENST00000309469 ARSGQ96EG1 525 aa19.62■□□□□ 0.73
ATG4D-201ENST00000309469 OR6C1Q96RD1 312 aa19.62■□□□□ 0.73
ATG4D-201ENST00000309469 SH3GL3Q99963 347 aa19.62■□□□□ 0.73
ATG4D-201ENST00000309469 SYNDIG1Q9H7V2 258 aa19.62■□□□□ 0.73
ATG4D-201ENST00000309469 IL20Q9NYY1 176 aa19.62■□□□□ 0.73
ATG4D-201ENST00000309469 PRKNO60260 465 aaPredicted RBP19.61■□□□□ 0.73
ATG4D-201ENST00000309469 CDK4P11802 303 aa19.61■□□□□ 0.73
ATG4D-201ENST00000309469 PTNP21246 168 aa19.61■□□□□ 0.73
ATG4D-201ENST00000309469 IRF3Q14653 427 aa19.61■□□□□ 0.73
ATG4D-201ENST00000309469 SNAPC1Q16533 368 aa19.61■□□□□ 0.73
ATG4D-201ENST00000309469 ZNF550Q7Z398 422 aa19.61■□□□□ 0.73
ATG4D-201ENST00000309469 LAPTM4BQ86VI4 370 aa19.61■□□□□ 0.73
ATG4D-201ENST00000309469 TRIM2Q9C040 744 aa19.61■□□□□ 0.73
ATG4D-201ENST00000309469 VN1R1Q9GZP7 353 aa19.61■□□□□ 0.73
ATG4D-201ENST00000309469 FLRT3Q9NZU0 649 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms