RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 VMACQ2NL98 169 aa16.33■□□□□ 0.2
SSSCA1-201ENST00000309328 PATL1Q86TB9 770 aaKnown RBP16.33■□□□□ 0.2
SSSCA1-201ENST00000309328 MARCH3Q86UD3 253 aa16.33■□□□□ 0.2
SSSCA1-201ENST00000309328 SLC15A3Q8IY34 581 aa16.33■□□□□ 0.2
SSSCA1-201ENST00000309328 ZNF440Q8IYI8 595 aa16.33■□□□□ 0.2
SSSCA1-201ENST00000309328 ZNF614Q8N883 585 aa16.33■□□□□ 0.2
SSSCA1-201ENST00000309328 FADS6Q8N9I5 356 aa16.33■□□□□ 0.2
SSSCA1-201ENST00000309328 WDSUB1Q8N9V3 476 aa16.33■□□□□ 0.2
SSSCA1-201ENST00000309328 OR2T12Q8NG77 320 aa16.33■□□□□ 0.2
SSSCA1-201ENST00000309328 PHOSPHO1Q8TCT1 267 aa16.33■□□□□ 0.2
SSSCA1-201ENST00000309328 DUSP19Q8WTR2 217 aa16.33■□□□□ 0.2
SSSCA1-201ENST00000309328 WDR60Q8WVS4 1066 aa16.33■□□□□ 0.2
SSSCA1-201ENST00000309328 RASSF5Q8WWW0 418 aa16.33■□□□□ 0.2
SSSCA1-201ENST00000309328 MAL2Q969L2 176 aa16.33■□□□□ 0.2
SSSCA1-201ENST00000309328 GPR137Q96N19 417 aa16.33■□□□□ 0.2
SSSCA1-201ENST00000309328 C1orf21Q9H246 121 aa16.33■□□□□ 0.2
SSSCA1-201ENST00000309328 UBQLN3Q9H347 655 aa16.33■□□□□ 0.2
SSSCA1-201ENST00000309328 EXOSC3Q9NQT5 275 aaKnown RBP16.33■□□□□ 0.2
SSSCA1-201ENST00000309328 FLRT3Q9NZU0 649 aa16.33■□□□□ 0.2
SSSCA1-201ENST00000309328 PINLYPA6NC86 204 aa16.32■□□□□ 0.2
SSSCA1-201ENST00000309328 CCT8L1PA6NM43 557 aa16.32■□□□□ 0.2
SSSCA1-201ENST00000309328 ZNF264O43296 627 aa16.32■□□□□ 0.2
SSSCA1-201ENST00000309328 ZIC2O95409 532 aaPredicted RBP16.32■□□□□ 0.2
SSSCA1-201ENST00000309328 CBX6O95503 412 aa16.32■□□□□ 0.2
SSSCA1-201ENST00000309328 IFNA14P01570 189 aa16.32■□□□□ 0.2
SSSCA1-201ENST00000309328 HPNP05981 417 aa16.32■□□□□ 0.2
SSSCA1-201ENST00000309328 UQCRBP14927 111 aa16.32■□□□□ 0.2
SSSCA1-201ENST00000309328 GDF1P27539 372 aa16.32■□□□□ 0.2
SSSCA1-201ENST00000309328 SLC7A2P52569 658 aa16.32■□□□□ 0.2
SSSCA1-201ENST00000309328 KCNJ10P78508 379 aa16.32■□□□□ 0.2
SSSCA1-201ENST00000309328 PMP22Q01453 160 aa16.32■□□□□ 0.2
SSSCA1-201ENST00000309328 MAPK11Q15759 364 aa16.32■□□□□ 0.2
SSSCA1-201ENST00000309328 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.32■□□□□ 0.2
SSSCA1-201ENST00000309328 GLYR1Q49A26 553 aaPredicted RBP16.32■□□□□ 0.2
SSSCA1-201ENST00000309328 EIPR1Q53HC9 387 aa16.32■□□□□ 0.2
SSSCA1-201ENST00000309328 SAMD4BQ5PRF9 694 aaKnown RBP16.32■□□□□ 0.2
SSSCA1-201ENST00000309328 RNF220Q5VTB9 566 aa16.32■□□□□ 0.2
SSSCA1-201ENST00000309328 FNDC7Q5VTL7 733 aa16.32■□□□□ 0.2
SSSCA1-201ENST00000309328 APOOLQ6UXV4 268 aa16.32■□□□□ 0.2
SSSCA1-201ENST00000309328 PRICKLE2Q7Z3G6 844 aa16.32■□□□□ 0.2
SSSCA1-201ENST00000309328 PTOV1Q86YD1 416 aa16.32■□□□□ 0.2
SSSCA1-201ENST00000309328 SIAH3Q8IW03 269 aa16.32■□□□□ 0.2
SSSCA1-201ENST00000309328 ZZZ3Q8IYH5 903 aa16.32■□□□□ 0.2
SSSCA1-201ENST00000309328 GHDCQ8N2G8 530 aa16.32■□□□□ 0.2
SSSCA1-201ENST00000309328 TMEM251Q8N6I4 163 aa16.32■□□□□ 0.2
SSSCA1-201ENST00000309328 OR52P1PQ8NH57 321 aa16.32■□□□□ 0.2
SSSCA1-201ENST00000309328 B4GALNT2Q8NHY0 566 aa16.32■□□□□ 0.2
SSSCA1-201ENST00000309328 NFKBIDQ8NI38 313 aa16.32■□□□□ 0.2
SSSCA1-201ENST00000309328 GNRHR2Q96P88 292 aa16.32■□□□□ 0.2
SSSCA1-201ENST00000309328 LAT2Q9GZY6 243 aa16.32■□□□□ 0.2
SSSCA1-201ENST00000309328 RUBCNLQ9H714 662 aa16.32■□□□□ 0.2
SSSCA1-201ENST00000309328 ASF1BQ9NVP2 202 aa16.32■□□□□ 0.2
SSSCA1-201ENST00000309328 ELOVL7A1L3X0 281 aa16.31■□□□□ 0.2
SSSCA1-201ENST00000309328 LINC01387J3KSC0 135 aa16.31■□□□□ 0.2
SSSCA1-201ENST00000309328 GNB5O14775 395 aa16.31■□□□□ 0.2
SSSCA1-201ENST00000309328 HCRTR2O43614 444 aa16.31■□□□□ 0.2
SSSCA1-201ENST00000309328 SUSD5O60279 629 aa16.31■□□□□ 0.2
SSSCA1-201ENST00000309328 ATP5HO75947 161 aa16.31■□□□□ 0.2
SSSCA1-201ENST00000309328 C1QL1O75973 258 aa16.31■□□□□ 0.2
SSSCA1-201ENST00000309328 CSTAP01040 98 aa16.31■□□□□ 0.2
SSSCA1-201ENST00000309328 IGHG3P01860 377 aa16.31■□□□□ 0.2
SSSCA1-201ENST00000309328 PRKAR1BP31321 381 aa16.31■□□□□ 0.2
SSSCA1-201ENST00000309328 SLC6A8P48029 635 aa16.31■□□□□ 0.2
SSSCA1-201ENST00000309328 CPA2P48052 419 aa16.31■□□□□ 0.2
SSSCA1-201ENST00000309328 RASSF2P50749 326 aa16.31■□□□□ 0.2
SSSCA1-201ENST00000309328 GZMMP51124 257 aa16.31■□□□□ 0.2
SSSCA1-201ENST00000309328 P2RX1P51575 399 aa16.31■□□□□ 0.2
SSSCA1-201ENST00000309328 RBPJQ06330 500 aa16.31■□□□□ 0.2
SSSCA1-201ENST00000309328 ARHGAP11AQ6P4F7 1023 aa16.31■□□□□ 0.2
SSSCA1-201ENST00000309328 GRAMD2AQ8IUY3 354 aa16.31■□□□□ 0.2
SSSCA1-201ENST00000309328 C10orf111Q8N326 155 aa16.31■□□□□ 0.2
SSSCA1-201ENST00000309328 FAM71CQ8NEG0 241 aa16.31■□□□□ 0.2
SSSCA1-201ENST00000309328 ZNF583Q96ND8 569 aa16.31■□□□□ 0.2
SSSCA1-201ENST00000309328 ALG2Q9H553 416 aa16.31■□□□□ 0.2
SSSCA1-201ENST00000309328 PLSCR2Q9NRY7 297 aa16.31■□□□□ 0.2
SSSCA1-201ENST00000309328 CMTM6Q9NX76 183 aa16.31■□□□□ 0.2
SSSCA1-201ENST00000309328 TMEM181Q9P2C4 612 aa16.31■□□□□ 0.2
SSSCA1-201ENST00000309328 DKKL1Q9UK85 242 aa16.31■□□□□ 0.2
SSSCA1-201ENST00000309328 GPC6Q9Y625 555 aaPredicted RBP16.31■□□□□ 0.2
SSSCA1-201ENST00000309328 PRRC2CQ9Y520 2896 aaKnown RBP16.3■□□□□ 0.2
SSSCA1-201ENST00000309328 NPIPA5A0A0B4J1W7 369 aa16.3■□□□□ 0.2
SSSCA1-201ENST00000309328 OR14I1A6ND48 311 aa16.3■□□□□ 0.2
SSSCA1-201ENST00000309328 B2RBV5 119 aa16.3■□□□□ 0.2
SSSCA1-201ENST00000309328 NPIPA7E9PJI5 369 aa16.3■□□□□ 0.2
SSSCA1-201ENST00000309328 ADAM10O14672 748 aa16.3■□□□□ 0.2
SSSCA1-201ENST00000309328 GMNNO75496 209 aa16.3■□□□□ 0.2
SSSCA1-201ENST00000309328 NPIPA8P0DM63 369 aa16.3■□□□□ 0.2
SSSCA1-201ENST00000309328 MAGEA5P43359 124 aa16.3■□□□□ 0.2
SSSCA1-201ENST00000309328 ZNF41P51814 821 aaPredicted RBP16.3■□□□□ 0.2
SSSCA1-201ENST00000309328 MLLT10P55197 1068 aa16.3■□□□□ 0.2
SSSCA1-201ENST00000309328 PCBP3P57721 371 aaKnown RBP16.3■□□□□ 0.2
SSSCA1-201ENST00000309328 LIPEQ05469 1076 aa16.3■□□□□ 0.2
SSSCA1-201ENST00000309328 CBFBQ13951 182 aa16.3■□□□□ 0.2
SSSCA1-201ENST00000309328 ELOAQ14241 798 aaKnown RBP16.3■□□□□ 0.2
SSSCA1-201ENST00000309328 ZNF311Q5JNZ3 666 aa16.3■□□□□ 0.2
SSSCA1-201ENST00000309328 CCDC80Q76M96 950 aa16.3■□□□□ 0.2
SSSCA1-201ENST00000309328 ATCAYQ86WG3 371 aa16.3■□□□□ 0.2
SSSCA1-201ENST00000309328 MICU2Q8IYU8 434 aa16.3■□□□□ 0.2
SSSCA1-201ENST00000309328 ST6GALNAC3Q8NDV1 305 aa16.3■□□□□ 0.2
SSSCA1-201ENST00000309328 OR2M3Q8NG83 312 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms