RNA–Protein interactions for RNA: ENST00000307712.10

SEC23A-201, Transcript of Sec23 homolog A, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23A, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-201ENST00000307712 VEGFCP49767 419 aa12.62□□□□□ -0.39
SEC23A-201ENST00000307712 ARFIP1P53367 373 aa12.62□□□□□ -0.39
SEC23A-201ENST00000307712 CLDN12P56749 244 aa12.62□□□□□ -0.39
SEC23A-201ENST00000307712 KIAA1024LP59773 190 aa12.62□□□□□ -0.39
SEC23A-201ENST00000307712 CCNJQ5T5M9 372 aa12.62□□□□□ -0.39
SEC23A-201ENST00000307712 MEPCEQ7L2J0 689 aaKnown RBP12.62□□□□□ -0.39
SEC23A-201ENST00000307712 SYT9Q86SS6 491 aa12.62□□□□□ -0.39
SEC23A-201ENST00000307712 IQCF2Q8IXL9 164 aa12.62□□□□□ -0.39
SEC23A-201ENST00000307712 SPAG16Q8N0X2 631 aa12.62□□□□□ -0.39
SEC23A-201ENST00000307712 ADAMTS14Q8WXS8 1223 aa12.62□□□□□ -0.39
SEC23A-201ENST00000307712 SMPDL3BQ92485 455 aa12.62□□□□□ -0.39
SEC23A-201ENST00000307712 RBPMSQ93062 196 aaKnown RBP12.62□□□□□ -0.39
SEC23A-201ENST00000307712 UPRTQ96BW1 309 aa12.62□□□□□ -0.39
SEC23A-201ENST00000307712 TRMT61AQ96FX7 289 aaKnown RBP12.62□□□□□ -0.39
SEC23A-201ENST00000307712 DEFB118Q96PH6 123 aa12.62□□□□□ -0.39
SEC23A-201ENST00000307712 ZNF436Q9C0F3 470 aaPredicted RBP12.62□□□□□ -0.39
SEC23A-201ENST00000307712 NXF2Q9GZY0 626 aaKnown RBP12.62□□□□□ -0.39
SEC23A-201ENST00000307712 MIXL1Q9H2W2 232 aa12.62□□□□□ -0.39
SEC23A-201ENST00000307712 FKBP14Q9NWM8 211 aa12.62□□□□□ -0.39
SEC23A-201ENST00000307712 RABL2AQ9UBK7 228 aaPredicted RBP12.62□□□□□ -0.39
SEC23A-201ENST00000307712 CKLFQ9UBR5 152 aa12.62□□□□□ -0.39
SEC23A-201ENST00000307712 MBD1Q9UIS9 605 aaPredicted RBP12.62□□□□□ -0.39
SEC23A-201ENST00000307712 TRIP12Q14669 1992 aaPredicted RBP12.61□□□□□ -0.39
SEC23A-201ENST00000307712 TRAPPC13A5PLN9 417 aa12.61□□□□□ -0.39
SEC23A-201ENST00000307712 FAM171A2A8MVW0 826 aa12.61□□□□□ -0.39
SEC23A-201ENST00000307712 HMGN4O00479 90 aa12.61□□□□□ -0.39
SEC23A-201ENST00000307712 GAPDHSO14556 408 aaPredicted RBP12.61□□□□□ -0.39
SEC23A-201ENST00000307712 PEX14O75381 377 aa12.61□□□□□ -0.39
SEC23A-201ENST00000307712 SLC2A10O95528 541 aa12.61□□□□□ -0.39
SEC23A-201ENST00000307712 PAK4O96013 591 aaPredicted RBP12.61□□□□□ -0.39
SEC23A-201ENST00000307712 CERS1P27544 350 aa12.61□□□□□ -0.39
SEC23A-201ENST00000307712 GDNFP39905 211 aa12.61□□□□□ -0.39
SEC23A-201ENST00000307712 GDI2P50395 445 aaKnown RBP12.61□□□□□ -0.39
SEC23A-201ENST00000307712 RAE1P78406 368 aaKnown RBP12.61□□□□□ -0.39
SEC23A-201ENST00000307712 ZBTB37Q5TC79 503 aa12.61□□□□□ -0.39
SEC23A-201ENST00000307712 IDO2Q6ZQW0 420 aa12.61□□□□□ -0.39
SEC23A-201ENST00000307712 ESPNLQ6ZVH7 1005 aa12.61□□□□□ -0.39
SEC23A-201ENST00000307712 SLC38A6Q8IZM9 456 aa12.61□□□□□ -0.39
SEC23A-201ENST00000307712 OR4K14Q8NGD5 310 aa12.61□□□□□ -0.39
SEC23A-201ENST00000307712 ANGPTL6Q8NI99 470 aa12.61□□□□□ -0.39
SEC23A-201ENST00000307712 ZNF563Q8TA94 476 aa12.61□□□□□ -0.39
SEC23A-201ENST00000307712 CHAC2Q8WUX2 184 aa12.61□□□□□ -0.39
SEC23A-201ENST00000307712 GHSRQ92847 366 aa12.61□□□□□ -0.39
SEC23A-201ENST00000307712 MOAP1Q96BY2 351 aa12.61□□□□□ -0.39
SEC23A-201ENST00000307712 RBM18Q96H35 190 aaKnown RBP12.61□□□□□ -0.39
SEC23A-201ENST00000307712 KXD1Q9BQD3 176 aa12.61□□□□□ -0.39
SEC23A-201ENST00000307712 C1QTNF7Q9BXJ2 289 aa12.61□□□□□ -0.39
SEC23A-201ENST00000307712 SRMSQ9H3Y6 488 aa12.61□□□□□ -0.39
SEC23A-201ENST00000307712 GLIPR2Q9H4G4 154 aa12.61□□□□□ -0.39
SEC23A-201ENST00000307712 PRDM9Q9NQV7 894 aa12.61□□□□□ -0.39
SEC23A-201ENST00000307712 LYARQ9NX58 379 aaKnown RBP12.61□□□□□ -0.39
SEC23A-201ENST00000307712 PTTG3PQ9NZH4 202 aa12.61□□□□□ -0.39
SEC23A-201ENST00000307712 PLEKHB1Q9UF11 243 aaPredicted RBP12.61□□□□□ -0.39
SEC23A-201ENST00000307712 COPS3Q9UNS2 423 aa12.61□□□□□ -0.39
SEC23A-201ENST00000307712 FARSAQ9Y285 508 aaKnown RBP12.61□□□□□ -0.39
SEC23A-201ENST00000307712 PLEKHA6Q9Y2H5 1048 aa12.61□□□□□ -0.39
SEC23A-201ENST00000307712 POLR1DQ9Y2S0 133 aa12.61□□□□□ -0.39
SEC23A-201ENST00000307712 URB1O60287 2271 aaKnown RBP12.61□□□□□ -0.39
SEC23A-201ENST00000307712 GRXCR1A8MXD5 290 aa12.61□□□□□ -0.39
SEC23A-201ENST00000307712 DISC1C4P0D8 188 aa12.61□□□□□ -0.39
SEC23A-201ENST00000307712 CD160O95971 181 aa12.61□□□□□ -0.39
SEC23A-201ENST00000307712 ZNF806P0C7X5 589 aa12.61□□□□□ -0.39
SEC23A-201ENST00000307712 VAMP1P23763 118 aa12.61□□□□□ -0.39
SEC23A-201ENST00000307712 MTNR1BP49286 362 aa12.61□□□□□ -0.39
SEC23A-201ENST00000307712 IRF3Q14653 427 aa12.61□□□□□ -0.39
SEC23A-201ENST00000307712 FAM122CQ6P4D5 195 aa12.61□□□□□ -0.39
SEC23A-201ENST00000307712 ZNF322Q6U7Q0 402 aaPredicted RBP12.61□□□□□ -0.39
SEC23A-201ENST00000307712 APOOLQ6UXV4 268 aa12.61□□□□□ -0.39
SEC23A-201ENST00000307712 ABHD4Q8TB40 342 aa12.61□□□□□ -0.39
SEC23A-201ENST00000307712 CD99L2Q8TCZ2 262 aa12.61□□□□□ -0.39
SEC23A-201ENST00000307712 THEM6Q8WUY1 208 aa12.61□□□□□ -0.39
SEC23A-201ENST00000307712 CCDC107Q8WV48 283 aa12.61□□□□□ -0.39
SEC23A-201ENST00000307712 RNF31Q96EP0 1072 aa12.61□□□□□ -0.39
SEC23A-201ENST00000307712 TSNAXQ99598 290 aaKnown RBP12.61□□□□□ -0.39
SEC23A-201ENST00000307712 NOX3Q9HBY0 568 aa12.61□□□□□ -0.39
SEC23A-201ENST00000307712 C5orf51A6NDU8 294 aa12.61□□□□□ -0.39
SEC23A-201ENST00000307712 EXOSC2Q13868 293 aaKnown RBP12.61□□□□□ -0.39
SEC23A-201ENST00000307712 LCTLQ6UWM7 567 aa12.61□□□□□ -0.39
SEC23A-201ENST00000307712 GPR155Q7Z3F1 870 aa12.61□□□□□ -0.39
SEC23A-201ENST00000307712 NRROSQ86YC3 692 aa12.61□□□□□ -0.39
SEC23A-201ENST00000307712 NKAIN4Q8IVV8 208 aa12.61□□□□□ -0.39
SEC23A-201ENST00000307712 BBS1Q8NFJ9 593 aa12.61□□□□□ -0.39
SEC23A-201ENST00000307712 KCTD12Q96CX2 325 aaKnown RBP12.61□□□□□ -0.39
SEC23A-201ENST00000307712 PLA2G12AQ9BZM1 189 aa12.61□□□□□ -0.39
SEC23A-201ENST00000307712 MTHFD2LQ9H903 347 aaPredicted RBP12.61□□□□□ -0.39
SEC23A-201ENST00000307712 TREM1Q9NP99 234 aa12.61□□□□□ -0.39
SEC23A-201ENST00000307712 SLAMF7Q9NQ25 335 aa12.61□□□□□ -0.39
SEC23A-201ENST00000307712 ASB6Q9NWX5 421 aa12.61□□□□□ -0.39
SEC23A-201ENST00000307712 EXO1Q9UQ84 846 aaKnown RBP12.61□□□□□ -0.39
SEC23A-201ENST00000307712 COLEC10Q9Y6Z7 277 aa12.61□□□□□ -0.39
SEC23A-201ENST00000307712 TRAV27A0A087WT01 109 aa12.6□□□□□ -0.39
SEC23A-201ENST00000307712 ERVH48-1M5A8F1 160 aa12.6□□□□□ -0.39
SEC23A-201ENST00000307712 PTH2RP49190 550 aa12.6□□□□□ -0.39
SEC23A-201ENST00000307712 OR10A3P58181 314 aa12.6□□□□□ -0.39
SEC23A-201ENST00000307712 MRPL58Q14197 206 aaKnown RBP12.6□□□□□ -0.39
SEC23A-201ENST00000307712 HYAL4Q2M3T9 481 aa12.6□□□□□ -0.39
SEC23A-201ENST00000307712 MPP7Q5T2T1 576 aa12.6□□□□□ -0.39
SEC23A-201ENST00000307712 BAIAP2L2Q6UXY1 529 aa12.6□□□□□ -0.39
SEC23A-201ENST00000307712 ACOT4Q8N9L9 421 aa12.6□□□□□ -0.39
SEC23A-201ENST00000307712 ZDHHC1Q8WTX9 485 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms