RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 B4GALT2O60909 372 aa13.62□□□□□ -0.23
PTPN9-201ENST00000306726 KIAA1024LP59773 190 aa13.62□□□□□ -0.23
PTPN9-201ENST00000306726 KCNAB1Q14722 419 aa13.62□□□□□ -0.23
PTPN9-201ENST00000306726 CDKN3Q16667 212 aa13.62□□□□□ -0.23
PTPN9-201ENST00000306726 CDK20Q8IZL9 346 aa13.62□□□□□ -0.23
PTPN9-201ENST00000306726 GALNT11Q8NCW6 608 aa13.62□□□□□ -0.23
PTPN9-201ENST00000306726 SDR9C7Q8NEX9 313 aa13.62□□□□□ -0.23
PTPN9-201ENST00000306726 OR4D9Q8NGE8 314 aa13.62□□□□□ -0.23
PTPN9-201ENST00000306726 PFN4Q8NHR9 129 aa13.62□□□□□ -0.23
PTPN9-201ENST00000306726 CDS1Q92903 461 aa13.62□□□□□ -0.23
PTPN9-201ENST00000306726 ASIC5Q9NY37 505 aa13.62□□□□□ -0.23
PTPN9-201ENST00000306726 SLCO2B1O94956 709 aa13.62□□□□□ -0.23
PTPN9-201ENST00000306726 GABRB1P18505 474 aa13.62□□□□□ -0.23
PTPN9-201ENST00000306726 ENDOUP21128 410 aaKnown RBP13.62□□□□□ -0.23
PTPN9-201ENST00000306726 TBXA2RP21731 343 aa13.62□□□□□ -0.23
PTPN9-201ENST00000306726 DEFA5Q01523 94 aa13.62□□□□□ -0.23
PTPN9-201ENST00000306726 SMAD4Q13485 552 aaKnown RBP13.62□□□□□ -0.23
PTPN9-201ENST00000306726 ENTPD8Q5MY95 495 aa13.62□□□□□ -0.23
PTPN9-201ENST00000306726 KLHDC8AQ8IYD2 350 aa13.62□□□□□ -0.23
PTPN9-201ENST00000306726 OR13C2Q8NGS9 318 aa13.62□□□□□ -0.23
PTPN9-201ENST00000306726 C1orf216Q8TAB5 229 aa13.62□□□□□ -0.23
PTPN9-201ENST00000306726 SMARCD2Q92925 531 aa13.62□□□□□ -0.23
PTPN9-201ENST00000306726 NXPE3Q969Y0 559 aa13.62□□□□□ -0.23
PTPN9-201ENST00000306726 AUNIPQ9H7T9 357 aa13.62□□□□□ -0.23
PTPN9-201ENST00000306726 NDUFB11Q9NX14 153 aa13.62□□□□□ -0.23
PTPN9-201ENST00000306726 ZNF346Q9UL40 294 aaKnown RBP13.62□□□□□ -0.23
PTPN9-201ENST00000306726 OBSL1O75147 1896 aa13.62□□□□□ -0.23
PTPN9-201ENST00000306726 SLC9B1P1A6NJY1 282 aa13.62□□□□□ -0.23
PTPN9-201ENST00000306726 PPP1R3DO95685 299 aa13.62□□□□□ -0.23
PTPN9-201ENST00000306726 HLA-DQA2P01906 255 aa13.62□□□□□ -0.23
PTPN9-201ENST00000306726 KCNJ5P48544 419 aa13.62□□□□□ -0.23
PTPN9-201ENST00000306726 PLK5Q496M5 336 aa13.62□□□□□ -0.23
PTPN9-201ENST00000306726 NDUFAF7Q7L592 441 aa13.62□□□□□ -0.23
PTPN9-201ENST00000306726 TMED4Q7Z7H5 227 aa13.62□□□□□ -0.23
PTPN9-201ENST00000306726 TRAM1L1Q8N609 369 aa13.62□□□□□ -0.23
PTPN9-201ENST00000306726 PTCHD1Q96NR3 888 aa13.62□□□□□ -0.23
PTPN9-201ENST00000306726 MS4A7Q9GZW8 240 aaPredicted RBP13.62□□□□□ -0.23
PTPN9-201ENST00000306726 SLC6A17Q9H1V8 727 aa13.62□□□□□ -0.23
PTPN9-201ENST00000306726 SLA2Q9H6Q3 261 aa13.62□□□□□ -0.23
PTPN9-201ENST00000306726 REV1Q9UBZ9 1251 aa13.62□□□□□ -0.23
PTPN9-201ENST00000306726 ASGR2P07307 311 aa13.61□□□□□ -0.23
PTPN9-201ENST00000306726 TRHRP34981 398 aaPredicted RBP13.61□□□□□ -0.23
PTPN9-201ENST00000306726 PDGFRLQ15198 375 aa13.61□□□□□ -0.23
PTPN9-201ENST00000306726 TOR2AQ5JU69 321 aa13.61□□□□□ -0.23
PTPN9-201ENST00000306726 KIF18BQ86Y91 864 aa13.61□□□□□ -0.23
PTPN9-201ENST00000306726 SIAH3Q8IW03 269 aa13.61□□□□□ -0.23
PTPN9-201ENST00000306726 ACBD7Q8N6N7 88 aa13.61□□□□□ -0.23
PTPN9-201ENST00000306726 OR14C36Q8NHC7 312 aa13.61□□□□□ -0.23
PTPN9-201ENST00000306726 MRPS30Q9NP92 439 aaKnown RBP13.61□□□□□ -0.23
PTPN9-201ENST00000306726 NUP210Q8TEM1 1887 aaPredicted RBP13.61□□□□□ -0.23
PTPN9-201ENST00000306726 OR6C74A6NCV1 312 aa13.61□□□□□ -0.23
PTPN9-201ENST00000306726 ARPC5O15511 151 aa13.61□□□□□ -0.23
PTPN9-201ENST00000306726 LIMS3P0CW19 117 aa13.61□□□□□ -0.23
PTPN9-201ENST00000306726 LIMS4P0CW20 117 aa13.61□□□□□ -0.23
PTPN9-201ENST00000306726 HSD3B1P14060 373 aa13.61□□□□□ -0.23
PTPN9-201ENST00000306726 EXOSC7Q15024 291 aaKnown RBP13.61□□□□□ -0.23
PTPN9-201ENST00000306726 Q6ZNB5 142 aa13.61□□□□□ -0.23
PTPN9-201ENST00000306726 LAS2Q8IYD9 372 aa13.61□□□□□ -0.23
PTPN9-201ENST00000306726 SIRT6Q8N6T7 355 aa13.61□□□□□ -0.23
PTPN9-201ENST00000306726 ELMOD3Q96FG2 381 aa13.61□□□□□ -0.23
PTPN9-201ENST00000306726 MSLNLQ96KJ4 702 aa13.61□□□□□ -0.23
PTPN9-201ENST00000306726 HCAR1Q9BXC0 346 aa13.61□□□□□ -0.23
PTPN9-201ENST00000306726 ENKD1Q9H0I2 346 aa13.61□□□□□ -0.23
PTPN9-201ENST00000306726 S1PR5Q9H228 398 aa13.61□□□□□ -0.23
PTPN9-201ENST00000306726 TMEM45AQ9NWC5 275 aa13.61□□□□□ -0.23
PTPN9-201ENST00000306726 CHD7Q9P2D1 2997 aa13.61□□□□□ -0.23
PTPN9-201ENST00000306726 MOSPD3O75425 235 aa13.61□□□□□ -0.23
PTPN9-201ENST00000306726 IL1AP01583 271 aa13.61□□□□□ -0.23
PTPN9-201ENST00000306726 APOC3P02656 99 aa13.61□□□□□ -0.23
PTPN9-201ENST00000306726 BICRALQ6AI39 1079 aa13.61□□□□□ -0.23
PTPN9-201ENST00000306726 RFKQ969G6 155 aa13.61□□□□□ -0.23
PTPN9-201ENST00000306726 CHST8Q9H2A9 424 aa13.61□□□□□ -0.23
PTPN9-201ENST00000306726 DPAGT1Q9H3H5 408 aa13.61□□□□□ -0.23
PTPN9-201ENST00000306726 RCE1Q9Y256 329 aa13.61□□□□□ -0.23
PTPN9-201ENST00000306726 DENND4CQ5VZ89 1909 aa13.61□□□□□ -0.23
PTPN9-201ENST00000306726 TBC1D3DA0A087WVF3 549 aa13.6□□□□□ -0.23
PTPN9-201ENST00000306726 TBC1D3IA0A087WXS9 549 aa13.6□□□□□ -0.23
PTPN9-201ENST00000306726 TBC1D3EA0A087X179 549 aa13.6□□□□□ -0.23
PTPN9-201ENST00000306726 TBC1D3KA0A087X1G2 549 aa13.6□□□□□ -0.23
PTPN9-201ENST00000306726 TBC1D3FA6NER0 549 aaPredicted RBP13.6□□□□□ -0.23
PTPN9-201ENST00000306726 TBC1D3LB9A6J9 549 aa13.6□□□□□ -0.23
PTPN9-201ENST00000306726 BLOC1S5-TXNDC5H3BN57 136 aa13.6□□□□□ -0.23
PTPN9-201ENST00000306726 H3BUI4 141 aa13.6□□□□□ -0.23
PTPN9-201ENST00000306726 TBC1D3HP0C7X1 549 aa13.6□□□□□ -0.23
PTPN9-201ENST00000306726 EDNRAP25101 427 aa13.6□□□□□ -0.23
PTPN9-201ENST00000306726 PDX1P52945 283 aa13.6□□□□□ -0.23
PTPN9-201ENST00000306726 YOD1Q5VVQ6 348 aaPredicted RBP13.6□□□□□ -0.23
PTPN9-201ENST00000306726 TBC1D3GQ6DHY5 549 aa13.6□□□□□ -0.23
PTPN9-201ENST00000306726 TBC1D3CQ6IPX1 549 aa13.6□□□□□ -0.23
PTPN9-201ENST00000306726 TBC1D3Q8IZP1 549 aaPredicted RBP13.6□□□□□ -0.23
PTPN9-201ENST00000306726 FBXO15Q8NCQ5 510 aaPredicted RBP13.6□□□□□ -0.23
PTPN9-201ENST00000306726 OR52E4Q8NGH9 312 aa13.6□□□□□ -0.23
PTPN9-201ENST00000306726 OR56A3Q8NH54 315 aa13.6□□□□□ -0.23
PTPN9-201ENST00000306726 OR4C6Q8NH72 309 aa13.6□□□□□ -0.23
PTPN9-201ENST00000306726 GIMAP1Q8WWP7 306 aa13.6□□□□□ -0.23
PTPN9-201ENST00000306726 ST8SIA2Q92186 375 aa13.6□□□□□ -0.23
PTPN9-201ENST00000306726 DDOQ99489 341 aa13.6□□□□□ -0.23
PTPN9-201ENST00000306726 OR51J1Q9H342 316 aa13.6□□□□□ -0.23
PTPN9-201ENST00000306726 BRF2Q9HAW0 419 aa13.6□□□□□ -0.23
PTPN9-201ENST00000306726 A4GNTQ9UNA3 340 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms