RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 FAM26EQ8N5C1 309 aa10□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 ANKFN1Q8N957 763 aa10□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 TOR1AIP2Q8NFQ8 470 aa10□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 B4GALNT2Q8NHY0 566 aa10□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 WDR60Q8WVS4 1066 aa10□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 C1GALT1C1Q96EU7 318 aa10□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 CPPED1Q9BRF8 314 aaPredicted RBP10□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 RTN4RQ9BZR6 473 aa10□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 TP63Q9H3D4 680 aaPredicted RBP10□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 GID8Q9NWU2 228 aa10□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 SLC25A37Q9NYZ2 338 aa10□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 SLAMF8Q9P0V8 285 aa10□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 TINAGQ9UJW2 476 aa10□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 VDAC3Q9Y277 283 aa10□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 SLC35A3Q9Y2D2 325 aa10□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 RPH3AQ9Y2J0 694 aaPredicted RBP10□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 ZNF835Q9Y2P0 537 aa10□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 ARL2BPQ9Y2Y0 163 aa10□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 SLC6A5Q9Y345 797 aa10□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 KIAA1549Q9HCM3 1950 aa9.99□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 A0A087WZY1 265 aa9.99□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 IGLV3-32A0A0A0MS00 114 aa9.99□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 LOC100653049A0A140TA62 436 aa9.99□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 SERINC4A6NH21 518 aa9.99□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 CCL21O00585 134 aa9.99□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 ZNHIT1O43257 154 aa9.99□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 ZNF264O43296 627 aa9.99□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 LRRTM2O43300 516 aa9.99□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 FCMRO60667 390 aa9.99□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 WDR1O75083 606 aa9.99□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 UGT2B17O75795 530 aa9.99□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 DCTN3O75935 186 aa9.99□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 KRT34O76011 436 aa9.99□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 ACTL6AO96019 429 aa9.99□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 CSTAP01040 98 aa9.99□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 CD1EP15812 388 aa9.99□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 IL7RP16871 459 aa9.99□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 RNF144AP50876 292 aaPredicted RBP9.99□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 P2RX1P51575 399 aa9.99□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 MVDP53602 400 aa9.99□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 ZNF117Q03924 483 aa9.99□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 CHRNEQ04844 493 aa9.99□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 CBFBQ13951 182 aa9.99□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 FGFBP1Q14512 234 aa9.99□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 CYP51A1Q16850 503 aa9.99□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 RUNDC3AQ59EK9 446 aa9.99□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 ZNF585AQ6P3V2 769 aa9.99□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 EIF3MQ7L2H7 374 aaKnown RBP9.99□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 FGD2Q7Z6J4 655 aa9.99□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 MTDHQ86UE4 582 aaKnown RBP9.99□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 RETREG3Q86VR2 466 aa9.99□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 MSRB3Q8IXL7 192 aa9.99□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 OR5M9Q8NGP3 310 aa9.99□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 RP9Q8TA86 221 aaKnown RBP9.99□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 BBS10Q8TAM1 723 aa9.99□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 PMM1Q92871 262 aa9.99□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 ABTB1Q969K4 478 aaPredicted RBP9.99□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 TMEM19Q96HH6 336 aa9.99□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 ANKRD27Q96NW4 1050 aa9.99□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 SH3GL1Q99961 368 aa9.99□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 PIGQQ9BRB3 760 aa9.99□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 THUMPD3Q9BV44 507 aaKnown RBP9.99□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 SAP130Q9H0E3 1048 aa9.99□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 SLC38A1Q9H2H9 487 aa9.99□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 A4GALTQ9NPC4 353 aa9.99□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.99□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 SPRR3Q9UBC9 169 aa9.99□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 TNFRSF10DQ9UBN6 386 aa9.99□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 CAMK2AQ9UQM7 478 aa9.99□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 ANGPT4Q9Y264 503 aa9.99□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 CARD8Q9Y2G2 431 aa9.99□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 MRPS18CQ9Y3D5 142 aaKnown RBP9.99□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 L3MBTL1Q9Y468 752 aa9.99□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 HRH3Q9Y5N1 445 aa9.99□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 RP1L1Q8IWN7 2480 aaPredicted RBP9.99□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 DIDO1Q9BTC0 2240 aaKnown RBP9.98□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 TRBV5-3A0A0A0MS03 114 aa9.98□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 PRAMEF27A3QJZ7 478 aa9.98□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 NPIPB9F8W1W9 429 aa9.98□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 FBP2O00757 339 aa9.98□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 ADAM10O14672 748 aa9.98□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 EIF4E2O60573 245 aaKnown RBP9.98□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 ZIC2O95409 532 aaPredicted RBP9.98□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 NPPAP01160 153 aa9.98□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 DBIP07108 87 aaKnown RBP9.98□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 UBTFL6P0CB48 400 aaPredicted RBP9.98□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 ARAFP10398 606 aa9.98□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 BMP2P12643 396 aa9.98□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 COX4I1P13073 169 aa9.98□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 GABRA1P14867 456 aa9.98□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 ZNF17P17021 662 aa9.98□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 POU3F2P20265 443 aaPredicted RBP9.98□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 SLC6A2P23975 617 aa9.98□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 CHMP24386 653 aa9.98□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 MTPNP58546 118 aa9.98□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 CRYZQ08257 329 aaKnown RBP9.98□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 CAPRIN1Q14444 709 aaKnown RBP9.98□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 SF3B4Q15427 424 aaKnown RBP eCLIP9.98□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 GXYLT1Q4G148 440 aa9.98□□□□□ -0.81
CSPG4P1Y-201ENST00000306641 LIN52Q52LA3 116 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms