RNA–Protein interactions for RNA: ENST00000304060.9

ZNF440-201, Transcript of zinc finger protein 440, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF440, Length 4,189 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440-201ENST00000304060 REXO4Q9GZR2 422 aaKnown RBP5.34□□□□□ -1.55
ZNF440-201ENST00000304060 OR10A4Q9H209 315 aa5.34□□□□□ -1.55
ZNF440-201ENST00000304060 TBK1Q9UHD2 729 aa5.34□□□□□ -1.55
ZNF440-201ENST00000304060 METRNQ9UJH8 293 aa5.34□□□□□ -1.55
ZNF440-201ENST00000304060 SNX24Q9Y343 169 aa5.34□□□□□ -1.55
ZNF440-201ENST00000304060 ATG4BQ9Y4P1 393 aa5.34□□□□□ -1.55
ZNF440-201ENST00000304060 LINC00862A6NCI5 91 aa5.34□□□□□ -1.55
ZNF440-201ENST00000304060 hCG_2039718K7EN88 272 aa5.34□□□□□ -1.55
ZNF440-201ENST00000304060 CFLARO15519 480 aa5.34□□□□□ -1.55
ZNF440-201ENST00000304060 NIPSNAP2O75323 286 aa5.34□□□□□ -1.55
ZNF440-201ENST00000304060 NTSP30990 170 aa5.34□□□□□ -1.55
ZNF440-201ENST00000304060 PDLIM4P50479 330 aa5.34□□□□□ -1.55
ZNF440-201ENST00000304060 HK2P52789 917 aa5.34□□□□□ -1.55
ZNF440-201ENST00000304060 PLCXD2Q0VAA5 305 aa5.34□□□□□ -1.55
ZNF440-201ENST00000304060 TM4SF20Q53R12 229 aa5.34□□□□□ -1.55
ZNF440-201ENST00000304060 ZFP1Q6P2D0 407 aa5.34□□□□□ -1.55
ZNF440-201ENST00000304060 TRABD2AQ86V40 505 aa5.34□□□□□ -1.55
ZNF440-201ENST00000304060 IGFN1Q86VF2 1251 aa5.34□□□□□ -1.55
ZNF440-201ENST00000304060 TMCO5AQ8N6Q1 288 aa5.34□□□□□ -1.55
ZNF440-201ENST00000304060 FLVCR1-AS1Q8TAF5 88 aa5.34□□□□□ -1.55
ZNF440-201ENST00000304060 RGMAQ96B86 450 aa5.34□□□□□ -1.55
ZNF440-201ENST00000304060 PIMREGQ9BSJ6 248 aa5.34□□□□□ -1.55
ZNF440-201ENST00000304060 NT5DC2Q9H857 520 aa5.34□□□□□ -1.55
ZNF440-201ENST00000304060 DLL4Q9NR61 685 aa5.34□□□□□ -1.55
ZNF440-201ENST00000304060 FARSBQ9NSD9 589 aaKnown RBP5.34□□□□□ -1.55
ZNF440-201ENST00000304060 ACOXLQ9NUZ1 547 aa5.34□□□□□ -1.55
ZNF440-201ENST00000304060 PPP4R1LQ9P1A2 415 aa5.34□□□□□ -1.55
ZNF440-201ENST00000304060 BCAP29Q9UHQ4 241 aa5.34□□□□□ -1.55
ZNF440-201ENST00000304060 PRSS51A0A1B0GVH4 220 aa5.34□□□□□ -1.55
ZNF440-201ENST00000304060 GNG14A0A1W2PPG7 69 aa5.34□□□□□ -1.55
ZNF440-201ENST00000304060 MBD3L4A6NDZ8 208 aaPredicted RBP5.34□□□□□ -1.55
ZNF440-201ENST00000304060 MBD3L3A6NE82 208 aaPredicted RBP5.34□□□□□ -1.55
ZNF440-201ENST00000304060 MBD3L5A6NJ08 208 aaPredicted RBP5.34□□□□□ -1.55
ZNF440-201ENST00000304060 H3BMH7 237 aa5.34□□□□□ -1.55
ZNF440-201ENST00000304060 GNB5O14775 395 aa5.34□□□□□ -1.55
ZNF440-201ENST00000304060 HS3ST1O14792 307 aa5.34□□□□□ -1.55
ZNF440-201ENST00000304060 PDPK1O15530 556 aa5.34□□□□□ -1.55
ZNF440-201ENST00000304060 SPAG7O75391 227 aa5.34□□□□□ -1.55
ZNF440-201ENST00000304060 MATN4O95460 622 aa5.34□□□□□ -1.55
ZNF440-201ENST00000304060 MAOAP21397 527 aa5.34□□□□□ -1.55
ZNF440-201ENST00000304060 NT5EP21589 574 aa5.34□□□□□ -1.55
ZNF440-201ENST00000304060 COILP38432 576 aaPredicted RBP5.34□□□□□ -1.55
ZNF440-201ENST00000304060 GUCA1AP43080 201 aaPredicted RBP5.34□□□□□ -1.55
ZNF440-201ENST00000304060 PLA2G16P53816 162 aa5.34□□□□□ -1.55
ZNF440-201ENST00000304060 CD300CQ08708 224 aa5.34□□□□□ -1.55
ZNF440-201ENST00000304060 CTBP1Q13363 440 aa5.34□□□□□ -1.55
ZNF440-201ENST00000304060 ZNF846Q147U1 533 aa5.34□□□□□ -1.55
ZNF440-201ENST00000304060 EXOC3L2Q2M3D2 409 aa5.34□□□□□ -1.55
ZNF440-201ENST00000304060 PIGGQ5H8A4 983 aa5.34□□□□□ -1.55
ZNF440-201ENST00000304060 MRM1Q6IN84 353 aaKnown RBP5.34□□□□□ -1.55
ZNF440-201ENST00000304060 PLEKHG7Q6ZR37 379 aa5.34□□□□□ -1.55
ZNF440-201ENST00000304060 FGD2Q7Z6J4 655 aa5.34□□□□□ -1.55
ZNF440-201ENST00000304060 NKAIN3Q8N8D7 197 aa5.34□□□□□ -1.55
ZNF440-201ENST00000304060 MBD3L2Q8NHZ7 208 aaPredicted RBP5.34□□□□□ -1.55
ZNF440-201ENST00000304060 S100ZQ8WXG8 99 aa5.34□□□□□ -1.55
ZNF440-201ENST00000304060 FBXL8Q96CD0 374 aa5.34□□□□□ -1.55
ZNF440-201ENST00000304060 LINGO1Q96FE5 620 aa5.34□□□□□ -1.55
ZNF440-201ENST00000304060 GPR21Q99679 349 aa5.34□□□□□ -1.55
ZNF440-201ENST00000304060 C8orf4Q9NR00 106 aa5.34□□□□□ -1.55
ZNF440-201ENST00000304060 PAK1IP1Q9NWT1 392 aaPredicted RBP5.34□□□□□ -1.55
ZNF440-201ENST00000304060 DIMT1Q9UNQ2 313 aaKnown RBP5.34□□□□□ -1.55
ZNF440-201ENST00000304060 GRIP1Q9Y3R0 1128 aa5.34□□□□□ -1.55
ZNF440-201ENST00000304060 FRYQ5TBA9 3013 aa5.34□□□□□ -1.56
ZNF440-201ENST00000304060 MROH6A6NGR9 719 aa5.34□□□□□ -1.56
ZNF440-201ENST00000304060 RNF223E7ERA6 249 aa5.34□□□□□ -1.56
ZNF440-201ENST00000304060 COPEO14579 308 aa5.34□□□□□ -1.56
ZNF440-201ENST00000304060 TM9SF1O15321 606 aa5.34□□□□□ -1.56
ZNF440-201ENST00000304060 RCBTB2O95199 551 aa5.34□□□□□ -1.56
ZNF440-201ENST00000304060 C1GALT1C1LP0DN25 315 aa5.34□□□□□ -1.56
ZNF440-201ENST00000304060 CNTFP26441 200 aa5.34□□□□□ -1.56
ZNF440-201ENST00000304060 GTF2E2P29084 291 aaKnown RBP5.34□□□□□ -1.56
ZNF440-201ENST00000304060 RPL3P39023 403 aaKnown RBP5.34□□□□□ -1.56
ZNF440-201ENST00000304060 DDOSTP39656 456 aa5.34□□□□□ -1.56
ZNF440-201ENST00000304060 GP5P40197 560 aa5.34□□□□□ -1.56
ZNF440-201ENST00000304060 RPS13P62277 151 aaKnown RBP5.34□□□□□ -1.56
ZNF440-201ENST00000304060 MMEL1Q495T6 779 aa5.34□□□□□ -1.56
ZNF440-201ENST00000304060 RBM20Q5T481 1227 aaKnown RBP5.34□□□□□ -1.56
ZNF440-201ENST00000304060 RAET1LQ5VY80 246 aa5.34□□□□□ -1.56
ZNF440-201ENST00000304060 GALNT12Q8IXK2 581 aa5.34□□□□□ -1.56
ZNF440-201ENST00000304060 KLHDC8AQ8IYD2 350 aa5.34□□□□□ -1.56
ZNF440-201ENST00000304060 MFSD4AQ8N468 514 aa5.34□□□□□ -1.56
ZNF440-201ENST00000304060 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.34□□□□□ -1.561e-6■■■■□ 23.9
ZNF440-201ENST00000304060 SLC2A12Q8TD20 617 aa5.34□□□□□ -1.56
ZNF440-201ENST00000304060 UBXN10Q96LJ8 280 aa5.34□□□□□ -1.56
ZNF440-201ENST00000304060 NTMT1Q9BV86 223 aa5.34□□□□□ -1.56
ZNF440-201ENST00000304060 PACSIN1Q9BY11 444 aa5.34□□□□□ -1.56
ZNF440-201ENST00000304060 NEK6Q9HC98 313 aa5.34□□□□□ -1.56
ZNF440-201ENST00000304060 KLHL28Q9NXS3 571 aa5.34□□□□□ -1.56
ZNF440-201ENST00000304060 RNF11Q9Y3C5 154 aa5.34□□□□□ -1.56
ZNF440-201ENST00000304060 IQCF5A8MTL0 148 aa5.33□□□□□ -1.56
ZNF440-201ENST00000304060 WDR47O94967 919 aa5.33□□□□□ -1.56
ZNF440-201ENST00000304060 C1QAP02745 245 aa5.33□□□□□ -1.56
ZNF440-201ENST00000304060 PIGAP37287 484 aa5.33□□□□□ -1.56
ZNF440-201ENST00000304060 LIMS1P48059 325 aa5.33□□□□□ -1.56
ZNF440-201ENST00000304060 NR0B1P51843 470 aaKnown RBP5.33□□□□□ -1.56
ZNF440-201ENST00000304060 FAPQ12884 760 aa5.33□□□□□ -1.56
ZNF440-201ENST00000304060 SLBPQ14493 270 aaKnown RBP eCLIP5.33□□□□□ -1.56
ZNF440-201ENST00000304060 FAM205BPQ63HN1 556 aa5.33□□□□□ -1.56
ZNF440-201ENST00000304060 IKBIPQ70UQ0 350 aa5.33□□□□□ -1.56
ZNF440-201ENST00000304060 PRSS48Q7RTY5 328 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms