RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 PEX10O60683 326 aa9.82□□□□□ -0.84
CLIP1-201ENST00000302528 PTTG1O95997 202 aa9.82□□□□□ -0.84
CLIP1-201ENST00000302528 PKLRP30613 574 aa9.82□□□□□ -0.84
CLIP1-201ENST00000302528 HOXD11P31277 338 aaPredicted RBP9.82□□□□□ -0.84
CLIP1-201ENST00000302528 GABARAPL2P60520 117 aa9.82□□□□□ -0.84
CLIP1-201ENST00000302528 MRPS34P82930 218 aaKnown RBP9.82□□□□□ -0.84
CLIP1-201ENST00000302528 EVX2Q03828 476 aa9.82□□□□□ -0.84
CLIP1-201ENST00000302528 SQSTM1Q13501 440 aa9.82□□□□□ -0.84
CLIP1-201ENST00000302528 PAFAH1B3Q15102 231 aaKnown RBP9.82□□□□□ -0.84
CLIP1-201ENST00000302528 PLEKHO2Q8TD55 490 aa9.82□□□□□ -0.84
CLIP1-201ENST00000302528 FAM122AQ96E09 287 aa9.82□□□□□ -0.84
CLIP1-201ENST00000302528 HHIPL1Q96JK4 782 aa9.82□□□□□ -0.84
CLIP1-201ENST00000302528 SLC45A3Q96JT2 553 aa9.82□□□□□ -0.84
CLIP1-201ENST00000302528 ACTRT3Q9BYD9 372 aa9.82□□□□□ -0.84
CLIP1-201ENST00000302528 OR14J1Q9UGF5 321 aa9.82□□□□□ -0.84
CLIP1-201ENST00000302528 IRS2Q9Y4H2 1338 aa9.82□□□□□ -0.84
CLIP1-201ENST00000302528 LOC102725191A0A1B0GVB3 256 aa9.82□□□□□ -0.84
CLIP1-201ENST00000302528 SOWAHBA6NEL2 793 aa9.82□□□□□ -0.84
CLIP1-201ENST00000302528 CRYM-AS1A6NIL9 109 aa9.82□□□□□ -0.84
CLIP1-201ENST00000302528 RFPL3O75679 317 aa9.82□□□□□ -0.84
CLIP1-201ENST00000302528 FGF18O76093 207 aa9.82□□□□□ -0.84
CLIP1-201ENST00000302528 CHRM4P08173 479 aa9.82□□□□□ -0.84
CLIP1-201ENST00000302528 HLA-DOBP13765 273 aa9.82□□□□□ -0.84
CLIP1-201ENST00000302528 IL1RNP18510 177 aa9.82□□□□□ -0.84
CLIP1-201ENST00000302528 GGT1P19440 569 aa9.82□□□□□ -0.84
CLIP1-201ENST00000302528 PRKACBP22694 351 aa9.82□□□□□ -0.84
CLIP1-201ENST00000302528 AKR1C1Q04828 323 aa9.82□□□□□ -0.84
CLIP1-201ENST00000302528 DSC1Q08554 894 aa9.82□□□□□ -0.84
CLIP1-201ENST00000302528 ZNF783Q6ZMS7 281 aa9.82□□□□□ -0.84
CLIP1-201ENST00000302528 BAGE3Q86Y29 109 aa9.82□□□□□ -0.84
CLIP1-201ENST00000302528 BAGE2Q86Y30 109 aa9.82□□□□□ -0.84
CLIP1-201ENST00000302528 CNEP1R1Q8N9A8 125 aa9.82□□□□□ -0.84
CLIP1-201ENST00000302528 ZBTB8AQ96BR9 441 aa9.82□□□□□ -0.84
CLIP1-201ENST00000302528 MRPL38Q96DV4 380 aaKnown RBP9.82□□□□□ -0.84
CLIP1-201ENST00000302528 PRRC1Q96M27 445 aa9.82□□□□□ -0.84
CLIP1-201ENST00000302528 MAF1Q9H063 256 aa9.82□□□□□ -0.84
CLIP1-201ENST00000302528 MTHFD2LQ9H903 347 aaPredicted RBP9.82□□□□□ -0.84
CLIP1-201ENST00000302528 MRC1P22897 1456 aa9.82□□□□□ -0.84
CLIP1-201ENST00000302528 RNF212BA8MTL3 300 aa9.81□□□□□ -0.84
CLIP1-201ENST00000302528 DENRO43583 198 aaKnown RBP9.81□□□□□ -0.84
CLIP1-201ENST00000302528 MED6O75586 246 aa9.81□□□□□ -0.84
CLIP1-201ENST00000302528 HAPLN1P10915 354 aaPredicted RBP9.81□□□□□ -0.84
CLIP1-201ENST00000302528 BCKDHBP21953 392 aa9.81□□□□□ -0.84
CLIP1-201ENST00000302528 PAX6P26367 422 aa9.81□□□□□ -0.84
CLIP1-201ENST00000302528 LTC4SQ16873 150 aa9.81□□□□□ -0.84
CLIP1-201ENST00000302528 NXPE4Q6UWF7 544 aa9.81□□□□□ -0.84
CLIP1-201ENST00000302528 TXNDC5Q8NBS9 432 aaKnown RBP9.81□□□□□ -0.84
CLIP1-201ENST00000302528 OR4K5Q8NGD3 323 aa9.81□□□□□ -0.84
CLIP1-201ENST00000302528 TSACCQ96A04 125 aaPredicted RBP9.81□□□□□ -0.84
CLIP1-201ENST00000302528 FOXRED1Q96CU9 486 aaPredicted RBP9.81□□□□□ -0.84
CLIP1-201ENST00000302528 SAMD8Q96LT4 415 aa9.81□□□□□ -0.84
CLIP1-201ENST00000302528 ALG8Q9BVK2 526 aa9.81□□□□□ -0.84
CLIP1-201ENST00000302528 SLC6A17Q9H1V8 727 aa9.81□□□□□ -0.84
CLIP1-201ENST00000302528 CCM2LQ9NUG4 571 aaPredicted RBP9.81□□□□□ -0.84
CLIP1-201ENST00000302528 FER1L4A9Z1Z3 1794 aa9.81□□□□□ -0.84
CLIP1-201ENST00000302528 TRAPPC2LH3BP13 241 aa9.81□□□□□ -0.84
CLIP1-201ENST00000302528 DVL1O14640 695 aa9.81□□□□□ -0.84
CLIP1-201ENST00000302528 C7P10643 843 aa9.81□□□□□ -0.84
CLIP1-201ENST00000302528 ACRV1P26436 265 aa9.81□□□□□ -0.84
CLIP1-201ENST00000302528 FOLR3P41439 243 aa9.81□□□□□ -0.84
CLIP1-201ENST00000302528 GSK3AP49840 483 aa9.81□□□□□ -0.84
CLIP1-201ENST00000302528 DVL1P1P54792 670 aaPredicted RBP9.81□□□□□ -0.84
CLIP1-201ENST00000302528 RPL11P62913 178 aaKnown RBP9.81□□□□□ -0.84
CLIP1-201ENST00000302528 HYAL4Q2M3T9 481 aa9.81□□□□□ -0.84
CLIP1-201ENST00000302528 TCTE1Q5JU00 501 aa9.81□□□□□ -0.84
CLIP1-201ENST00000302528 FAM182AQ5T1J6 154 aa9.81□□□□□ -0.84
CLIP1-201ENST00000302528 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.81□□□□□ -0.84
CLIP1-201ENST00000302528 OR52N2Q8NGI0 321 aa9.81□□□□□ -0.84
CLIP1-201ENST00000302528 OR2T27Q8NH04 317 aa9.81□□□□□ -0.84
CLIP1-201ENST00000302528 TMEM19Q96HH6 336 aa9.81□□□□□ -0.84
CLIP1-201ENST00000302528 TRIB3Q96RU7 358 aa9.81□□□□□ -0.84
CLIP1-201ENST00000302528 FAM234AQ9H0X4 552 aa9.81□□□□□ -0.84
CLIP1-201ENST00000302528 HRASLSQ9HDD0 168 aa9.81□□□□□ -0.84
CLIP1-201ENST00000302528 ASB4Q9Y574 426 aa9.81□□□□□ -0.84
CLIP1-201ENST00000302528 SURF4O15260 269 aa9.81□□□□□ -0.84
CLIP1-201ENST00000302528 PRICKLE3O43900 615 aaPredicted RBP9.81□□□□□ -0.84
CLIP1-201ENST00000302528 ONECUT3O60422 494 aaPredicted RBP9.81□□□□□ -0.84
CLIP1-201ENST00000302528 FADS1O60427 444 aa9.81□□□□□ -0.84
CLIP1-201ENST00000302528 FOXD2O60548 495 aaPredicted RBP9.81□□□□□ -0.84
CLIP1-201ENST00000302528 EPOP01588 193 aa9.81□□□□□ -0.84
CLIP1-201ENST00000302528 UBBP0CG47 229 aa9.81□□□□□ -0.84
CLIP1-201ENST00000302528 UBCP0CG48 685 aaKnown RBP9.81□□□□□ -0.84
CLIP1-201ENST00000302528 RNF151Q2KHN1 245 aa9.81□□□□□ -0.84
CLIP1-201ENST00000302528 TIFABQ6ZNK6 161 aa9.81□□□□□ -0.84
CLIP1-201ENST00000302528 ZNF765Q7L2R6 523 aa9.81□□□□□ -0.84
CLIP1-201ENST00000302528 OR5D14Q8NGL3 314 aa9.81□□□□□ -0.84
CLIP1-201ENST00000302528 OR6F1Q8NGZ6 308 aa9.81□□□□□ -0.84
CLIP1-201ENST00000302528 OR5W2Q8NH69 310 aa9.81□□□□□ -0.84
CLIP1-201ENST00000302528 SYNPRQ8TBG9 265 aa9.81□□□□□ -0.84
CLIP1-201ENST00000302528 ZNF689Q96CS4 500 aaPredicted RBP9.81□□□□□ -0.84
CLIP1-201ENST00000302528 ZNF436Q9C0F3 470 aaPredicted RBP9.81□□□□□ -0.84
CLIP1-201ENST00000302528 MAGIXQ9H6Y5 334 aa9.81□□□□□ -0.84
CLIP1-201ENST00000302528 SLC23A2Q9UGH3 650 aa9.81□□□□□ -0.84
CLIP1-201ENST00000302528 PCDHGA5Q9Y5G8 931 aa9.81□□□□□ -0.84
CLIP1-201ENST00000302528 HSPE1-MOB4S4R3N1 261 aa9.81□□□□□ -0.84
CLIP1-201ENST00000302528 SULT2B1O00204 365 aa9.81□□□□□ -0.84
CLIP1-201ENST00000302528 MSTNO14793 375 aa9.81□□□□□ -0.84
CLIP1-201ENST00000302528 SCAMP2O15127 329 aaKnown RBP9.81□□□□□ -0.84
CLIP1-201ENST00000302528 OR10J4P0C629 311 aa9.81□□□□□ -0.84
CLIP1-201ENST00000302528 NFYAP23511 347 aaPredicted RBP9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms