RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 DBIP07108 87 aaKnown RBP8.66□□□□□ -1.02
RFX3-201ENST00000302303 SP1P08047 785 aa8.66□□□□□ -1.02
RFX3-201ENST00000302303 PRG2P13727 222 aa8.66□□□□□ -1.02
RFX3-201ENST00000302303 TNFRSF1BP20333 461 aa8.66□□□□□ -1.02
RFX3-201ENST00000302303 PRKAR1BP31321 381 aa8.66□□□□□ -1.02
RFX3-201ENST00000302303 KRT20P35900 424 aa8.66□□□□□ -1.02
RFX3-201ENST00000302303 ACAA2P42765 397 aaKnown RBP8.66□□□□□ -1.02
RFX3-201ENST00000302303 ZNF136P52737 540 aa8.66□□□□□ -1.02
RFX3-201ENST00000302303 OC90Q02509 493 aaPredicted RBP8.66□□□□□ -1.02
RFX3-201ENST00000302303 SKP2Q13309 424 aa8.66□□□□□ -1.02
RFX3-201ENST00000302303 SNTA1Q13424 505 aa8.66□□□□□ -1.02
RFX3-201ENST00000302303 ELOAQ14241 798 aaKnown RBP8.66□□□□□ -1.02
RFX3-201ENST00000302303 NPTX1Q15818 432 aa8.66□□□□□ -1.02
RFX3-201ENST00000302303 CYBRD1Q53TN4 286 aa8.66□□□□□ -1.02
RFX3-201ENST00000302303 ZNF311Q5JNZ3 666 aa8.66□□□□□ -1.02
RFX3-201ENST00000302303 MRPL2Q5T653 305 aaKnown RBP8.66□□□□□ -1.02
RFX3-201ENST00000302303 INTS11Q5TA45 600 aaKnown RBP8.66□□□□□ -1.02
RFX3-201ENST00000302303 RNF220Q5VTB9 566 aa8.66□□□□□ -1.02
RFX3-201ENST00000302303 IRAK1BP1Q5VVH5 260 aa8.66□□□□□ -1.02
RFX3-201ENST00000302303 ENPP6Q6UWR7 440 aa8.66□□□□□ -1.02
RFX3-201ENST00000302303 Q6ZS92 163 aa8.66□□□□□ -1.02
RFX3-201ENST00000302303 EIF3MQ7L2H7 374 aaKnown RBP8.66□□□□□ -1.02
RFX3-201ENST00000302303 VTCN1Q7Z7D3 282 aa8.66□□□□□ -1.02
RFX3-201ENST00000302303 RBM45Q8IUH3 476 aaKnown RBP8.66□□□□□ -1.02
RFX3-201ENST00000302303 GRAMD2AQ8IUY3 354 aa8.66□□□□□ -1.02
RFX3-201ENST00000302303 GATSQ8NAP1 163 aa8.66□□□□□ -1.02
RFX3-201ENST00000302303 DUSP19Q8WTR2 217 aa8.66□□□□□ -1.02
RFX3-201ENST00000302303 OIT3Q8WWZ8 545 aa8.66□□□□□ -1.02
RFX3-201ENST00000302303 MCUR1Q96AQ8 359 aa8.66□□□□□ -1.02
RFX3-201ENST00000302303 SLCO4A1Q96BD0 722 aa8.66□□□□□ -1.02
RFX3-201ENST00000302303 TMCO6Q96DC7 493 aa8.66□□□□□ -1.02
RFX3-201ENST00000302303 C7orf34Q96L11 122 aa8.66□□□□□ -1.02
RFX3-201ENST00000302303 MUC13Q9H3R2 512 aa8.66□□□□□ -1.02
RFX3-201ENST00000302303 DENND2DQ9H6A0 471 aaPredicted RBP8.66□□□□□ -1.02
RFX3-201ENST00000302303 DNAJB12Q9NXW2 375 aaKnown RBP8.66□□□□□ -1.02
RFX3-201ENST00000302303 CNIH4Q9P003 139 aa8.66□□□□□ -1.02
RFX3-201ENST00000302303 MAGEL2Q9UJ55 1249 aa8.66□□□□□ -1.02
RFX3-201ENST00000302303 ICAM5Q9UMF0 924 aa8.66□□□□□ -1.02
RFX3-201ENST00000302303 ABCG2Q9UNQ0 655 aa8.66□□□□□ -1.02
RFX3-201ENST00000302303 TP53TG5Q9Y2B4 290 aa8.66□□□□□ -1.02
RFX3-201ENST00000302303 CNTRLQ7Z7A1 2325 aa8.66□□□□□ -1.02
RFX3-201ENST00000302303 TMEM247A6NEH6 219 aa8.65□□□□□ -1.02
RFX3-201ENST00000302303 LRRC3CA6NJW4 275 aa8.65□□□□□ -1.02
RFX3-201ENST00000302303 MKRN2OSH3BPM6 223 aa8.65□□□□□ -1.02
RFX3-201ENST00000302303 FRS3O43559 492 aa8.65□□□□□ -1.02
RFX3-201ENST00000302303 NME2P1O60361 137 aa8.65□□□□□ -1.02
RFX3-201ENST00000302303 SLC25A12O75746 678 aa8.65□□□□□ -1.02
RFX3-201ENST00000302303 PRKD3O94806 890 aa8.65□□□□□ -1.02
RFX3-201ENST00000302303 FESP07332 822 aa8.65□□□□□ -1.02
RFX3-201ENST00000302303 RFPL3SP0C7P2 107 aa8.65□□□□□ -1.02
RFX3-201ENST00000302303 IL7RP16871 459 aa8.65□□□□□ -1.02
RFX3-201ENST00000302303 CNR1P21554 472 aa8.65□□□□□ -1.02
RFX3-201ENST00000302303 NME2P22392 152 aa8.65□□□□□ -1.02
RFX3-201ENST00000302303 DNASE1L1P49184 302 aa8.65□□□□□ -1.02
RFX3-201ENST00000302303 ERFP50548 548 aa8.65□□□□□ -1.02
RFX3-201ENST00000302303 GPR85P60893 370 aa8.65□□□□□ -1.02
RFX3-201ENST00000302303 ZNF117Q03924 483 aa8.65□□□□□ -1.02
RFX3-201ENST00000302303 KCNAB2Q13303 367 aa8.65□□□□□ -1.02
RFX3-201ENST00000302303 NRF1Q16656 503 aa8.65□□□□□ -1.02
RFX3-201ENST00000302303 LRRC23Q53EV4 343 aaPredicted RBP8.65□□□□□ -1.02
RFX3-201ENST00000302303 OR5M10Q6IEU7 315 aa8.65□□□□□ -1.02
RFX3-201ENST00000302303 SLC25A25Q6KCM7 469 aa8.65□□□□□ -1.02
RFX3-201ENST00000302303 DHFR2Q86XF0 187 aa8.65□□□□□ -1.02
RFX3-201ENST00000302303 ARMC8Q8IUR7 673 aa8.65□□□□□ -1.02
RFX3-201ENST00000302303 SULF2Q8IWU5 870 aa8.65□□□□□ -1.02
RFX3-201ENST00000302303 PEX5LQ8IYB4 626 aa8.65□□□□□ -1.02
RFX3-201ENST00000302303 FADS6Q8N9I5 356 aa8.65□□□□□ -1.02
RFX3-201ENST00000302303 TNIP2Q8NFZ5 429 aa8.65□□□□□ -1.02
RFX3-201ENST00000302303 PHF10Q8WUB8 498 aaKnown RBP8.65□□□□□ -1.02
RFX3-201ENST00000302303 ZNF607Q96SK3 696 aa8.65□□□□□ -1.02
RFX3-201ENST00000302303 NPAS1Q99742 590 aa8.65□□□□□ -1.02
RFX3-201ENST00000302303 ARHGDIGQ99819 225 aa8.65□□□□□ -1.02
RFX3-201ENST00000302303 PRR14Q9BWN1 585 aa8.65□□□□□ -1.02
RFX3-201ENST00000302303 PINK1Q9BXM7 581 aa8.65□□□□□ -1.02
RFX3-201ENST00000302303 SEC14L3Q9UDX4 400 aa8.65□□□□□ -1.02
RFX3-201ENST00000302303 TUBD1Q9UJT1 453 aa8.65□□□□□ -1.02
RFX3-201ENST00000302303 IFT52Q9Y366 437 aa8.65□□□□□ -1.02
RFX3-201ENST00000302303 PCDHGB7Q9Y5F8 929 aa8.65□□□□□ -1.02
RFX3-201ENST00000302303 PCDHGB6Q9Y5F9 930 aa8.65□□□□□ -1.02
RFX3-201ENST00000302303 NINQ8N4C6 2090 aa8.65□□□□□ -1.03
RFX3-201ENST00000302303 SYT5O00445 386 aa8.64□□□□□ -1.03
RFX3-201ENST00000302303 SCDO00767 359 aa8.64□□□□□ -1.03
RFX3-201ENST00000302303 TP53I11O14683 189 aa8.64□□□□□ -1.03
RFX3-201ENST00000302303 GSTA4O15217 222 aa8.64□□□□□ -1.03
RFX3-201ENST00000302303 NDUFB5O43674 189 aa8.64□□□□□ -1.03
RFX3-201ENST00000302303 SCO2O43819 266 aa8.64□□□□□ -1.03
RFX3-201ENST00000302303 SERPINB7O75635 380 aa8.64□□□□□ -1.03
RFX3-201ENST00000302303 PDE9AO76083 593 aa8.64□□□□□ -1.03
RFX3-201ENST00000302303 THY1P04216 161 aa8.64□□□□□ -1.03
RFX3-201ENST00000302303 C8BP07358 591 aa8.64□□□□□ -1.03
RFX3-201ENST00000302303 MST1P26927 711 aa8.64□□□□□ -1.03
RFX3-201ENST00000302303 OR1E2P47887 323 aa8.64□□□□□ -1.03
RFX3-201ENST00000302303 ACTR3P61158 418 aa8.64□□□□□ -1.03
RFX3-201ENST00000302303 ARG2P78540 354 aa8.64□□□□□ -1.03
RFX3-201ENST00000302303 HPCAP84074 193 aa8.64□□□□□ -1.03
RFX3-201ENST00000302303 KPNB1Q14974 876 aaKnown RBP8.64□□□□□ -1.03
RFX3-201ENST00000302303 TOMM34Q15785 309 aaPredicted RBP8.64□□□□□ -1.03
RFX3-201ENST00000302303 ST3GAL2Q16842 350 aa8.64□□□□□ -1.03
RFX3-201ENST00000302303 PLEKHN1Q494U1 663 aaPredicted RBP8.64□□□□□ -1.03
RFX3-201ENST00000302303 RNFT1Q5M7Z0 435 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms