RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 AKIRIN2Q53H80 203 aa13.15□□□□□ -0.3
SDC2-201ENST00000302190 HES5Q5TA89 166 aa13.15□□□□□ -0.3
SDC2-201ENST00000302190 HLA-DQA1Q5Y7H0 255 aa13.15□□□□□ -0.3
SDC2-201ENST00000302190 FAM122CQ6P4D5 195 aa13.15□□□□□ -0.3
SDC2-201ENST00000302190 XKRXQ6PP77 449 aa13.15□□□□□ -0.3
SDC2-201ENST00000302190 IKBIPQ70UQ0 350 aa13.15□□□□□ -0.3
SDC2-201ENST00000302190 FRMD1Q8N878 549 aa13.15□□□□□ -0.3
SDC2-201ENST00000302190 MRPL43Q8N983 215 aaKnown RBP13.15□□□□□ -0.3
SDC2-201ENST00000302190 ANKRD53Q8N9V6 530 aa13.15□□□□□ -0.3
SDC2-201ENST00000302190 SDR9C7Q8NEX9 313 aa13.15□□□□□ -0.3
SDC2-201ENST00000302190 NEURL3Q96EH8 262 aa13.15□□□□□ -0.3
SDC2-201ENST00000302190 PDXPQ96GD0 296 aa13.15□□□□□ -0.3
SDC2-201ENST00000302190 AMDHD1Q96NU7 426 aa13.15□□□□□ -0.3
SDC2-201ENST00000302190 FOXN4Q96NZ1 517 aa13.15□□□□□ -0.3
SDC2-201ENST00000302190 PITX2Q99697 317 aa13.15□□□□□ -0.3
SDC2-201ENST00000302190 ZNF559Q9BR84 538 aa13.15□□□□□ -0.3
SDC2-201ENST00000302190 TMEM38AQ9H6F2 299 aa13.15□□□□□ -0.3
SDC2-201ENST00000302190 FKBP7Q9Y680 259 aa13.15□□□□□ -0.3
SDC2-201ENST00000302190 ATP6V1G2-DDX39BF2Z307 99 aa13.15□□□□□ -0.3
SDC2-201ENST00000302190 GABRPO00591 440 aa13.15□□□□□ -0.3
SDC2-201ENST00000302190 B3GALNT1O75752 331 aa13.15□□□□□ -0.3
SDC2-201ENST00000302190 HBQ1P09105 142 aa13.15□□□□□ -0.3
SDC2-201ENST00000302190 UGT2B10P36537 528 aa13.15□□□□□ -0.3
SDC2-201ENST00000302190 SLC1A3P43003 542 aa13.15□□□□□ -0.3
SDC2-201ENST00000302190 GZMMP51124 257 aa13.15□□□□□ -0.3
SDC2-201ENST00000302190 PRDX1Q06830 199 aaKnown RBP13.15□□□□□ -0.3
SDC2-201ENST00000302190 GPM6BQ13491 265 aa13.15□□□□□ -0.3
SDC2-201ENST00000302190 ESPNLQ6ZVH7 1005 aa13.15□□□□□ -0.3
SDC2-201ENST00000302190 TSEN15Q8WW01 171 aaKnown RBP13.15□□□□□ -0.3
SDC2-201ENST00000302190 PRRC1Q96M27 445 aa13.15□□□□□ -0.3
SDC2-201ENST00000302190 HSPA12BQ96MM6 686 aa13.15□□□□□ -0.3
SDC2-201ENST00000302190 B3GNT4Q9C0J1 378 aa13.15□□□□□ -0.3
SDC2-201ENST00000302190 NKX2-4Q9H2Z4 354 aa13.15□□□□□ -0.3
SDC2-201ENST00000302190 IL21RQ9HBE5 538 aa13.15□□□□□ -0.3
SDC2-201ENST00000302190 HRASLS2Q9NWW9 162 aa13.15□□□□□ -0.3
SDC2-201ENST00000302190 GRIP1Q9Y3R0 1128 aa13.15□□□□□ -0.3
SDC2-201ENST00000302190 NYNRINQ9P2P1 1898 aaKnown RBP13.15□□□□□ -0.3
SDC2-201ENST00000302190 GVINP1Q7Z2Y8 2422 aa13.15□□□□□ -0.3
SDC2-201ENST00000302190 EPOPA6NHQ4 379 aa13.15□□□□□ -0.31
SDC2-201ENST00000302190 B4DGG1 531 aa13.15□□□□□ -0.31
SDC2-201ENST00000302190 ERVH48-1M5A8F1 160 aa13.15□□□□□ -0.31
SDC2-201ENST00000302190 OR7A10O76100 309 aa13.15□□□□□ -0.31
SDC2-201ENST00000302190 FGF19O95750 216 aa13.15□□□□□ -0.31
SDC2-201ENST00000302190 HSD17B2P37059 387 aa13.15□□□□□ -0.31
SDC2-201ENST00000302190 LGALS3BPQ08380 585 aa13.15□□□□□ -0.31
SDC2-201ENST00000302190 ANKRD54Q6NXT1 300 aa13.15□□□□□ -0.31
SDC2-201ENST00000302190 NRROSQ86YC3 692 aa13.15□□□□□ -0.31
SDC2-201ENST00000302190 LRRC25Q8N386 305 aaPredicted RBP13.15□□□□□ -0.31
SDC2-201ENST00000302190 TP53I13Q8NBR0 393 aaPredicted RBP13.15□□□□□ -0.31
SDC2-201ENST00000302190 SPPL3Q8TCT6 385 aa13.15□□□□□ -0.31
SDC2-201ENST00000302190 MSANTD3Q96H12 275 aa13.15□□□□□ -0.31
SDC2-201ENST00000302190 C12orf10Q9HB07 376 aa13.15□□□□□ -0.31
SDC2-201ENST00000302190 TCF7L1Q9HCS4 588 aa13.15□□□□□ -0.31
SDC2-201ENST00000302190 MYEF2Q9P2K5 600 aaKnown RBP13.15□□□□□ -0.31
SDC2-201ENST00000302190 POLR1DQ9Y2S0 133 aa13.15□□□□□ -0.31
SDC2-201ENST00000302190 PCDHGB1Q9Y5G3 927 aa13.15□□□□□ -0.31
SDC2-201ENST00000302190 ALG5Q9Y673 324 aa13.15□□□□□ -0.31
SDC2-201ENST00000302190 TRIM64BA6NI03 449 aa13.14□□□□□ -0.31
SDC2-201ENST00000302190 FMO6PO60774 539 aa13.14□□□□□ -0.31
SDC2-201ENST00000302190 UBXN7O94888 489 aa13.14□□□□□ -0.31
SDC2-201ENST00000302190 RCBTB2O95199 551 aa13.14□□□□□ -0.31
SDC2-201ENST00000302190 HTR3AP46098 478 aa13.14□□□□□ -0.31
SDC2-201ENST00000302190 SRP9P49458 86 aaKnown RBP13.14□□□□□ -0.31
SDC2-201ENST00000302190 GBX2P52951 348 aaPredicted RBP13.14□□□□□ -0.31
SDC2-201ENST00000302190 HCCSP53701 268 aa13.14□□□□□ -0.31
SDC2-201ENST00000302190 RHAGQ02094 409 aa13.14□□□□□ -0.31
SDC2-201ENST00000302190 SNTB2Q13425 540 aaKnown RBP13.14□□□□□ -0.31
SDC2-201ENST00000302190 LCTLQ6UWM7 567 aa13.14□□□□□ -0.31
SDC2-201ENST00000302190 GPR32P1Q8NGA4 272 aa13.14□□□□□ -0.31
SDC2-201ENST00000302190 OR8S1Q8NH09 359 aa13.14□□□□□ -0.31
SDC2-201ENST00000302190 TRMT10AQ8TBZ6 339 aaKnown RBP13.14□□□□□ -0.31
SDC2-201ENST00000302190 OR52D1Q9H346 318 aa13.14□□□□□ -0.31
SDC2-201ENST00000302190 DPAGT1Q9H3H5 408 aa13.14□□□□□ -0.31
SDC2-201ENST00000302190 ZNF69Q9UC07 566 aa13.14□□□□□ -0.31
SDC2-201ENST00000302190 ACSL5Q9ULC5 683 aa13.14□□□□□ -0.31
SDC2-201ENST00000302190 PLXNA4Q9HCM2 1894 aa13.14□□□□□ -0.31
SDC2-201ENST00000302190 NOTCH4Q99466 2003 aa13.14□□□□□ -0.31
SDC2-201ENST00000302190 TRBV2A0A0J9YWF9 115 aa13.14□□□□□ -0.31
SDC2-201ENST00000302190 MRPS14O60783 128 aaKnown RBP13.14□□□□□ -0.31
SDC2-201ENST00000302190 ITGB7P26010 798 aa13.14□□□□□ -0.31
SDC2-201ENST00000302190 STOMP27105 288 aa13.14□□□□□ -0.31
SDC2-201ENST00000302190 MLLT3P42568 568 aaPredicted RBP13.14□□□□□ -0.31
SDC2-201ENST00000302190 PON3Q15166 354 aa13.14□□□□□ -0.31
SDC2-201ENST00000302190 OTPQ5XKR4 325 aa13.14□□□□□ -0.31
SDC2-201ENST00000302190 JAZF1Q86VZ6 243 aa13.14□□□□□ -0.31
SDC2-201ENST00000302190 NRSN1Q8IZ57 195 aa13.14□□□□□ -0.31
SDC2-201ENST00000302190 ZNF676Q8N7Q3 588 aa13.14□□□□□ -0.31
SDC2-201ENST00000302190 GDPD1Q8N9F7 314 aa13.14□□□□□ -0.31
SDC2-201ENST00000302190 OR5M3Q8NGP4 307 aa13.14□□□□□ -0.31
SDC2-201ENST00000302190 OR13C2Q8NGS9 318 aa13.14□□□□□ -0.31
SDC2-201ENST00000302190 THEM6Q8WUY1 208 aa13.14□□□□□ -0.31
SDC2-201ENST00000302190 AKAP1Q92667 903 aaKnown RBP eCLIP13.14□□□□□ -0.31
SDC2-201ENST00000302190 ORAI1Q96D31 301 aa13.14□□□□□ -0.31
SDC2-201ENST00000302190 PTCHD1Q96NR3 888 aa13.14□□□□□ -0.31
SDC2-201ENST00000302190 PBX4Q9BYU1 374 aa13.14□□□□□ -0.31
SDC2-201ENST00000302190 ZBP1Q9H171 429 aa13.14□□□□□ -0.31
SDC2-201ENST00000302190 SPHK1Q9NYA1 384 aa13.14□□□□□ -0.31
SDC2-201ENST00000302190 UNC119BA6NIH7 251 aa13.14□□□□□ -0.31
SDC2-201ENST00000302190 CHRM4P08173 479 aa13.14□□□□□ -0.31
SDC2-201ENST00000302190 HOXB2P14652 356 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms