RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 MCRIP1C9JLW8 97 aa10.15□□□□□ -0.78
ZNF558-201ENST00000301475 PIP5K1CO60331 668 aa10.15□□□□□ -0.78
ZNF558-201ENST00000301475 WDPCPO95876 746 aa10.15□□□□□ -0.78
ZNF558-201ENST00000301475 TGM6O95932 706 aa10.15□□□□□ -0.78
ZNF558-201ENST00000301475 PLATP00750 562 aa10.15□□□□□ -0.78
ZNF558-201ENST00000301475 AHRP35869 848 aa10.15□□□□□ -0.78
ZNF558-201ENST00000301475 RAD52P43351 418 aa10.15□□□□□ -0.78
ZNF558-201ENST00000301475 SLC11A1P49279 550 aa10.15□□□□□ -0.78
ZNF558-201ENST00000301475 EIF2B5Q13144 721 aaKnown RBP10.15□□□□□ -0.78
ZNF558-201ENST00000301475 HTR4Q13639 388 aa10.15□□□□□ -0.78
ZNF558-201ENST00000301475 HLXQ14774 488 aaPredicted RBP10.15□□□□□ -0.78
ZNF558-201ENST00000301475 ZNF169Q14929 603 aaPredicted RBP10.15□□□□□ -0.78
ZNF558-201ENST00000301475 SLC22A10Q63ZE4 541 aa10.15□□□□□ -0.78
ZNF558-201ENST00000301475 NXPE4Q6UWF7 544 aa10.15□□□□□ -0.78
ZNF558-201ENST00000301475 ACBD7Q8N6N7 88 aa10.15□□□□□ -0.78
ZNF558-201ENST00000301475 SMIM4Q8WVI0 70 aa10.15□□□□□ -0.78
ZNF558-201ENST00000301475 HMGB4Q8WW32 186 aa10.15□□□□□ -0.78
ZNF558-201ENST00000301475 OVCA2Q8WZ82 227 aa10.15□□□□□ -0.78
ZNF558-201ENST00000301475 ATOH1Q92858 354 aaPredicted RBP10.15□□□□□ -0.78
ZNF558-201ENST00000301475 AHCYL2Q96HN2 611 aaKnown RBP10.15□□□□□ -0.78
ZNF558-201ENST00000301475 C7orf50Q9BRJ6 194 aaKnown RBP10.15□□□□□ -0.78
ZNF558-201ENST00000301475 YIPF4Q9BSR8 244 aa10.15□□□□□ -0.78
ZNF558-201ENST00000301475 SPATA5L1Q9BVQ7 753 aa10.15□□□□□ -0.78
ZNF558-201ENST00000301475 PCDHB16Q9NRJ7 776 aa10.15□□□□□ -0.78
ZNF558-201ENST00000301475 CREBZFQ9NS37 354 aa10.15□□□□□ -0.78
ZNF558-201ENST00000301475 ZMIZ1Q9ULJ6 1067 aa10.15□□□□□ -0.78
ZNF558-201ENST00000301475 NTNG1Q9Y2I2 539 aa10.15□□□□□ -0.78
ZNF558-201ENST00000301475 KLF2Q9Y5W3 355 aaPredicted RBP10.15□□□□□ -0.78
ZNF558-201ENST00000301475 UNC80Q8N2C7 3258 aa10.15□□□□□ -0.79
ZNF558-201ENST00000301475 FAM74A7A6NL05 159 aa10.15□□□□□ -0.79
ZNF558-201ENST00000301475 SUSD5O60279 629 aa10.15□□□□□ -0.79
ZNF558-201ENST00000301475 GALR3O60755 368 aaPredicted RBP10.15□□□□□ -0.79
ZNF558-201ENST00000301475 SC5DO75845 299 aa10.15□□□□□ -0.79
ZNF558-201ENST00000301475 CBX7O95931 251 aa10.15□□□□□ -0.79
ZNF558-201ENST00000301475 FAM74A3Q4VXF1 159 aa10.15□□□□□ -0.79
ZNF558-201ENST00000301475 NHLRC1Q6VVB1 395 aa10.15□□□□□ -0.79
ZNF558-201ENST00000301475 PXKQ7Z7A4 578 aa10.15□□□□□ -0.79
ZNF558-201ENST00000301475 NKAIN4Q8IVV8 208 aa10.15□□□□□ -0.79
ZNF558-201ENST00000301475 SLITRK4Q8IW52 837 aa10.15□□□□□ -0.79
ZNF558-201ENST00000301475 OR1S1Q8NH92 325 aa10.15□□□□□ -0.79
ZNF558-201ENST00000301475 BCL7CQ8WUZ0 217 aaPredicted RBP10.15□□□□□ -0.79
ZNF558-201ENST00000301475 DIO2Q92813 273 aa10.15□□□□□ -0.79
ZNF558-201ENST00000301475 SLC35G5Q96KT7 338 aa10.15□□□□□ -0.79
ZNF558-201ENST00000301475 RIOK2Q9BVS4 552 aaKnown RBP10.15□□□□□ -0.79
ZNF558-201ENST00000301475 HCAR1Q9BXC0 346 aa10.15□□□□□ -0.79
ZNF558-201ENST00000301475 SAV1Q9H4B6 383 aaPredicted RBP10.15□□□□□ -0.79
ZNF558-201ENST00000301475 TEX10Q9NXF1 929 aaPredicted RBP10.15□□□□□ -0.79
ZNF558-201ENST00000301475 IL20Q9NYY1 176 aa10.15□□□□□ -0.79
ZNF558-201ENST00000301475 EMC3Q9P0I2 261 aa10.15□□□□□ -0.79
ZNF558-201ENST00000301475 PFDN2Q9UHV9 154 aa10.15□□□□□ -0.79
ZNF558-201ENST00000301475 DENND4CQ5VZ89 1909 aa10.14□□□□□ -0.79
ZNF558-201ENST00000301475 COL4A3Q01955 1670 aa10.14□□□□□ -0.79
ZNF558-201ENST00000301475 A0A1W2PPK0 400 aa10.14□□□□□ -0.79
ZNF558-201ENST00000301475 AIPO00170 330 aa10.14□□□□□ -0.79
ZNF558-201ENST00000301475 ARPC1BO15143 372 aaKnown RBP10.14□□□□□ -0.79
ZNF558-201ENST00000301475 SELENOFO60613 162 aa10.14□□□□□ -0.79
ZNF558-201ENST00000301475 RB1P06400 928 aa10.14□□□□□ -0.79
ZNF558-201ENST00000301475 RAB3AP20336 220 aa10.14□□□□□ -0.79
ZNF558-201ENST00000301475 F8A1P23610 371 aa10.14□□□□□ -0.79
ZNF558-201ENST00000301475 TRHRP34981 398 aaPredicted RBP10.14□□□□□ -0.79
ZNF558-201ENST00000301475 FRKP42685 505 aaPredicted RBP10.14□□□□□ -0.79
ZNF558-201ENST00000301475 CBX5P45973 191 aa10.14□□□□□ -0.79
ZNF558-201ENST00000301475 SNRPD1P62314 119 aaKnown RBP10.14□□□□□ -0.79
ZNF558-201ENST00000301475 DYRK1AQ13627 763 aa10.14□□□□□ -0.79
ZNF558-201ENST00000301475 MELKQ14680 651 aa10.14□□□□□ -0.79
ZNF558-201ENST00000301475 ZDHHC20Q5W0Z9 365 aa10.14□□□□□ -0.79
ZNF558-201ENST00000301475 HIST2H2AA3Q6FI13 130 aa10.14□□□□□ -0.79
ZNF558-201ENST00000301475 CDC73Q6P1J9 531 aa10.14□□□□□ -0.79
ZNF558-201ENST00000301475 PLBD1Q6P4A8 553 aa10.14□□□□□ -0.79
ZNF558-201ENST00000301475 ZNF620Q6ZNG0 422 aa10.14□□□□□ -0.79
ZNF558-201ENST00000301475 ANKRD53Q8N9V6 530 aa10.14□□□□□ -0.79
ZNF558-201ENST00000301475 CHST14Q8NCH0 376 aa10.14□□□□□ -0.79
ZNF558-201ENST00000301475 CLRN3Q8NCR9 226 aa10.14□□□□□ -0.79
ZNF558-201ENST00000301475 ABHD4Q8TB40 342 aa10.14□□□□□ -0.79
ZNF558-201ENST00000301475 RGMAQ96B86 450 aa10.14□□□□□ -0.79
ZNF558-201ENST00000301475 FAM83CQ9BQN1 747 aa10.14□□□□□ -0.79
ZNF558-201ENST00000301475 HMX1Q9NP08 348 aaPredicted RBP10.14□□□□□ -0.79
ZNF558-201ENST00000301475 TRIM36Q9NQ86 728 aa10.14□□□□□ -0.79
ZNF558-201ENST00000301475 PRKAG2Q9UGJ0 569 aa10.14□□□□□ -0.79
ZNF558-201ENST00000301475 ATPIF1Q9UII2 106 aa10.14□□□□□ -0.79
ZNF558-201ENST00000301475 A0A1B0GUH1 482 aa10.14□□□□□ -0.79
ZNF558-201ENST00000301475 ZNF98A6NK75 572 aa10.14□□□□□ -0.79
ZNF558-201ENST00000301475 HNRNPCL2B2RXH8 293 aa10.14□□□□□ -0.79
ZNF558-201ENST00000301475 APOC3P02656 99 aa10.14□□□□□ -0.79
ZNF558-201ENST00000301475 NFYAP23511 347 aaPredicted RBP10.14□□□□□ -0.79
ZNF558-201ENST00000301475 ACVR1BP36896 505 aa10.14□□□□□ -0.79
ZNF558-201ENST00000301475 MAZP56270 477 aaKnown RBP10.14□□□□□ -0.79
ZNF558-201ENST00000301475 TMEM44Q2T9K0 475 aa10.14□□□□□ -0.79
ZNF558-201ENST00000301475 SLC25A25Q6KCM7 469 aa10.14□□□□□ -0.79
ZNF558-201ENST00000301475 C22orf39Q6P5X5 142 aa10.14□□□□□ -0.79
ZNF558-201ENST00000301475 CXXC5Q7LFL8 322 aaKnown RBP10.14□□□□□ -0.79
ZNF558-201ENST00000301475 RRM2BQ7LG56 351 aa10.14□□□□□ -0.79
ZNF558-201ENST00000301475 ASPGQ86U10 573 aa10.14□□□□□ -0.79
ZNF558-201ENST00000301475 TPRA1Q86W33 373 aa10.14□□□□□ -0.79
ZNF558-201ENST00000301475 C2orf73Q8N5S3 287 aaPredicted RBP10.14□□□□□ -0.79
ZNF558-201ENST00000301475 SCARB1Q8WTV0 552 aa10.14□□□□□ -0.79
ZNF558-201ENST00000301475 C2orf15Q8WU43 125 aaKnown RBP10.14□□□□□ -0.79
ZNF558-201ENST00000301475 AUTS2Q8WXX7 1259 aa10.14□□□□□ -0.79
ZNF558-201ENST00000301475 PGLYRP3Q96LB9 341 aa10.14□□□□□ -0.79
ZNF558-201ENST00000301475 F2RL3Q96RI0 385 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms