RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 CCDC86Q9H6F5 360 aaKnown RBP13.7□□□□□ -0.22
COL6A2-201ENST00000300527 ASB6Q9NWX5 421 aa13.7□□□□□ -0.22
COL6A2-201ENST00000300527 CBLCQ9ULV8 474 aa13.7□□□□□ -0.22
COL6A2-201ENST00000300527 PLXNA3P51805 1871 aa13.69□□□□□ -0.22
COL6A2-201ENST00000300527 ANXA7P20073 488 aaKnown RBP13.69□□□□□ -0.22
COL6A2-201ENST00000300527 CFL1P23528 166 aaKnown RBP13.69□□□□□ -0.22
COL6A2-201ENST00000300527 EPHB3P54753 998 aa13.69□□□□□ -0.22
COL6A2-201ENST00000300527 HYAL4Q2M3T9 481 aa13.69□□□□□ -0.22
COL6A2-201ENST00000300527 TP53I3Q53FA7 332 aa13.69□□□□□ -0.22
COL6A2-201ENST00000300527 ASTLQ6HA08 431 aaPredicted RBP13.69□□□□□ -0.22
COL6A2-201ENST00000300527 POGLUT1Q8NBL1 392 aa13.69□□□□□ -0.22
COL6A2-201ENST00000300527 OSTF1Q92882 214 aa13.69□□□□□ -0.22
COL6A2-201ENST00000300527 MARC2Q969Z3 335 aa13.69□□□□□ -0.22
COL6A2-201ENST00000300527 RAD51AP1Q96B01 352 aa13.69□□□□□ -0.22
COL6A2-201ENST00000300527 DPH7Q9BTV6 452 aa13.69□□□□□ -0.22
COL6A2-201ENST00000300527 SPATA5L1Q9BVQ7 753 aa13.69□□□□□ -0.22
COL6A2-201ENST00000300527 ARL6Q9H0F7 186 aa13.69□□□□□ -0.22
COL6A2-201ENST00000300527 C11orf49Q9H6J7 331 aa13.69□□□□□ -0.22
COL6A2-201ENST00000300527 WDR26Q9H7D7 661 aa13.69□□□□□ -0.22
COL6A2-201ENST00000300527 ARID1BQ8NFD5 2236 aaPredicted RBP13.69□□□□□ -0.22
COL6A2-201ENST00000300527 SCAMP1O15126 338 aa13.69□□□□□ -0.22
COL6A2-201ENST00000300527 POP7O75817 140 aaKnown RBP13.69□□□□□ -0.22
COL6A2-201ENST00000300527 CYBAP13498 195 aa13.69□□□□□ -0.22
COL6A2-201ENST00000300527 PTBP1P26599 531 aaKnown RBP eCLIP13.69□□□□□ -0.22
COL6A2-201ENST00000300527 NDUFAF5Q5TEU4 345 aa13.69□□□□□ -0.22
COL6A2-201ENST00000300527 FAM198BQ6UWH4 519 aa13.69□□□□□ -0.22
COL6A2-201ENST00000300527 TMEM150AQ86TG1 271 aa13.69□□□□□ -0.22
COL6A2-201ENST00000300527 C2orf15Q8WU43 125 aaKnown RBP13.69□□□□□ -0.22
COL6A2-201ENST00000300527 MARVELD3Q96A59 401 aa13.69□□□□□ -0.22
COL6A2-201ENST00000300527 SLC25A18Q9H1K4 315 aa13.69□□□□□ -0.22
COL6A2-201ENST00000300527 ISYNA1Q9NPH2 558 aa13.69□□□□□ -0.22
COL6A2-201ENST00000300527 CA10Q9NS85 328 aa13.69□□□□□ -0.22
COL6A2-201ENST00000300527 PSMD9O00233 223 aa13.69□□□□□ -0.22
COL6A2-201ENST00000300527 CDC42EP2O14613 210 aa13.69□□□□□ -0.22
COL6A2-201ENST00000300527 FMO6PO60774 539 aa13.69□□□□□ -0.22
COL6A2-201ENST00000300527 LPLP06858 475 aa13.69□□□□□ -0.22
COL6A2-201ENST00000300527 ADRB1P08588 477 aa13.69□□□□□ -0.22
COL6A2-201ENST00000300527 SULT1A3P0DMM9 295 aa13.69□□□□□ -0.22
COL6A2-201ENST00000300527 SULT1A4P0DMN0 295 aa13.69□□□□□ -0.22
COL6A2-201ENST00000300527 ATF1P18846 271 aa13.69□□□□□ -0.22
COL6A2-201ENST00000300527 F8A1P23610 371 aa13.69□□□□□ -0.22
COL6A2-201ENST00000300527 NOS3P29474 1203 aa13.69□□□□□ -0.22
COL6A2-201ENST00000300527 NTSP30990 170 aa13.69□□□□□ -0.22
COL6A2-201ENST00000300527 FKBP1BP68106 108 aa13.69□□□□□ -0.22
COL6A2-201ENST00000300527 ST3GAL3Q11203 375 aa13.69□□□□□ -0.22
COL6A2-201ENST00000300527 ZDHHC20Q5W0Z9 365 aa13.69□□□□□ -0.22
COL6A2-201ENST00000300527 IKBIPQ70UQ0 350 aa13.69□□□□□ -0.22
COL6A2-201ENST00000300527 ANKRD53Q8N9V6 530 aa13.69□□□□□ -0.22
COL6A2-201ENST00000300527 ZNF485Q8NCK3 441 aa13.69□□□□□ -0.22
COL6A2-201ENST00000300527 UBE2E3Q969T4 207 aa13.69□□□□□ -0.22
COL6A2-201ENST00000300527 NDC1Q9BTX1 674 aa13.69□□□□□ -0.22
COL6A2-201ENST00000300527 IFT27Q9BW83 186 aa13.69□□□□□ -0.22
COL6A2-201ENST00000300527 MRPL17Q9NRX2 175 aaKnown RBP13.69□□□□□ -0.22
COL6A2-201ENST00000300527 FBXL4Q9UKA2 621 aa13.69□□□□□ -0.22
COL6A2-201ENST00000300527 ACAD8Q9UKU7 415 aa13.69□□□□□ -0.22
COL6A2-201ENST00000300527 IRAK3Q9Y616 596 aa13.69□□□□□ -0.22
COL6A2-201ENST00000300527 RLN1P04808 185 aa13.68□□□□□ -0.22
COL6A2-201ENST00000300527 PRKAR2AP13861 404 aaKnown RBP13.68□□□□□ -0.22
COL6A2-201ENST00000300527 MAGEB1P43366 347 aa13.68□□□□□ -0.22
COL6A2-201ENST00000300527 KHKP50053 298 aa13.68□□□□□ -0.22
COL6A2-201ENST00000300527 OR52B4Q8NGK2 314 aa13.68□□□□□ -0.22
COL6A2-201ENST00000300527 OR2A12Q8NGT7 310 aa13.68□□□□□ -0.22
COL6A2-201ENST00000300527 OR51A7Q8NH64 312 aa13.68□□□□□ -0.22
COL6A2-201ENST00000300527 KLHL15Q96M94 604 aa13.68□□□□□ -0.22
COL6A2-201ENST00000300527 TMEM168Q9H0V1 697 aa13.68□□□□□ -0.22
COL6A2-201ENST00000300527 LIN7BQ9HAP6 207 aa13.68□□□□□ -0.22
COL6A2-201ENST00000300527 HRH3Q9Y5N1 445 aa13.68□□□□□ -0.22
COL6A2-201ENST00000300527 CACNA1CQ13936 2221 aa13.68□□□□□ -0.22
COL6A2-201ENST00000300527 MYO7AQ13402 2215 aa13.68□□□□□ -0.22
COL6A2-201ENST00000300527 PDCD5O14737 125 aa13.68□□□□□ -0.22
COL6A2-201ENST00000300527 FCMRO60667 390 aa13.68□□□□□ -0.22
COL6A2-201ENST00000300527 ADAMTS4O75173 837 aa13.68□□□□□ -0.22
COL6A2-201ENST00000300527 SPDEFO95238 335 aa13.68□□□□□ -0.22
COL6A2-201ENST00000300527 CXCL2P19875 107 aa13.68□□□□□ -0.22
COL6A2-201ENST00000300527 HTR1FP30939 366 aa13.68□□□□□ -0.22
COL6A2-201ENST00000300527 GPR1P46091 355 aa13.68□□□□□ -0.22
COL6A2-201ENST00000300527 PRLHRP49683 370 aa13.68□□□□□ -0.22
COL6A2-201ENST00000300527 TPMTP51580 245 aa13.68□□□□□ -0.22
COL6A2-201ENST00000300527 CCR8P51685 355 aa13.68□□□□□ -0.22
COL6A2-201ENST00000300527 ZNF157P51786 506 aaPredicted RBP13.68□□□□□ -0.22
COL6A2-201ENST00000300527 METAP1P53582 386 aa13.68□□□□□ -0.22
COL6A2-201ENST00000300527 ERVFC1P60507 584 aa13.68□□□□□ -0.22
COL6A2-201ENST00000300527 TGM3Q08188 693 aa13.68□□□□□ -0.22
COL6A2-201ENST00000300527 HTR4Q13639 388 aa13.68□□□□□ -0.22
COL6A2-201ENST00000300527 DEFB128Q7Z7B8 93 aa13.68□□□□□ -0.22
COL6A2-201ENST00000300527 TRAM1L1Q8N609 369 aa13.68□□□□□ -0.22
COL6A2-201ENST00000300527 OR52N1Q8NH53 320 aa13.68□□□□□ -0.22
COL6A2-201ENST00000300527 FIBINQ8TAL6 211 aa13.68□□□□□ -0.22
COL6A2-201ENST00000300527 LGALS14Q8TCE9 139 aa13.68□□□□□ -0.22
COL6A2-201ENST00000300527 SOCS4Q8WXH5 440 aa13.68□□□□□ -0.22
COL6A2-201ENST00000300527 GHSRQ92847 366 aa13.68□□□□□ -0.22
COL6A2-201ENST00000300527 TIFAQ96CG3 184 aa13.68□□□□□ -0.22
COL6A2-201ENST00000300527 ENKD1Q9H0I2 346 aa13.68□□□□□ -0.22
COL6A2-201ENST00000300527 PRKAG2Q9UGJ0 569 aa13.68□□□□□ -0.22
COL6A2-201ENST00000300527 POMT2Q9UKY4 750 aa13.68□□□□□ -0.22
COL6A2-201ENST00000300527 SLC7A7Q9UM01 511 aa13.68□□□□□ -0.22
COL6A2-201ENST00000300527 FKBP7Q9Y680 259 aa13.68□□□□□ -0.22
COL6A2-201ENST00000300527 PI15O43692 258 aa13.67□□□□□ -0.22
COL6A2-201ENST00000300527 PEX14O75381 377 aa13.67□□□□□ -0.22
COL6A2-201ENST00000300527 SAGP10523 405 aaPredicted RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms