RNA–Protein interactions for RNA: ENST00000298317.8

RPUSD4-201, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD4, Length 2,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-201ENST00000298317 MARCH5Q9NX47 278 aa12.61□□□□□ -0.39
RPUSD4-201ENST00000298317 TINAGQ9UJW2 476 aa12.61□□□□□ -0.39
RPUSD4-201ENST00000298317 PCOLCE2Q9UKZ9 415 aa12.61□□□□□ -0.39
RPUSD4-201ENST00000298317 CAMK2AQ9UQM7 478 aa12.61□□□□□ -0.39
RPUSD4-201ENST00000298317 NPFFR2Q9Y5X5 522 aa12.61□□□□□ -0.39
RPUSD4-201ENST00000298317 NUP210Q8TEM1 1887 aaPredicted RBP12.61□□□□□ -0.39
RPUSD4-201ENST00000298317 TRAV20A0A0B4J274 112 aa12.6□□□□□ -0.39
RPUSD4-201ENST00000298317 OR2M5A3KFT3 312 aa12.6□□□□□ -0.39
RPUSD4-201ENST00000298317 TMEM88BA6NKF7 163 aa12.6□□□□□ -0.39
RPUSD4-201ENST00000298317 PLPP2O43688 288 aa12.6□□□□□ -0.39
RPUSD4-201ENST00000298317 SUSD5O60279 629 aa12.6□□□□□ -0.39
RPUSD4-201ENST00000298317 SLC2A10O95528 541 aa12.6□□□□□ -0.39
RPUSD4-201ENST00000298317 SAGP10523 405 aaPredicted RBP12.6□□□□□ -0.39
RPUSD4-201ENST00000298317 NR2F1P10589 423 aa12.6□□□□□ -0.39
RPUSD4-201ENST00000298317 PPP2R1BP30154 601 aa12.6□□□□□ -0.39
RPUSD4-201ENST00000298317 AKR1D1P51857 326 aa12.6□□□□□ -0.39
RPUSD4-201ENST00000298317 LRRC73Q5JTD7 316 aa12.6□□□□□ -0.39
RPUSD4-201ENST00000298317 ARL9Q6T311 187 aa12.6□□□□□ -0.39
RPUSD4-201ENST00000298317 NXPE4Q6UWF7 544 aa12.6□□□□□ -0.39
RPUSD4-201ENST00000298317 ALKAL2Q6UX46 152 aa12.6□□□□□ -0.39
RPUSD4-201ENST00000298317 CEACAM19Q7Z692 300 aa12.6□□□□□ -0.39
RPUSD4-201ENST00000298317 OR1S1Q8NH92 325 aa12.6□□□□□ -0.39
RPUSD4-201ENST00000298317 BBS10Q8TAM1 723 aa12.6□□□□□ -0.39
RPUSD4-201ENST00000298317 SLC5A11Q8WWX8 675 aa12.6□□□□□ -0.39
RPUSD4-201ENST00000298317 TEX12Q9BXU0 123 aa12.6□□□□□ -0.39
RPUSD4-201ENST00000298317 GSDMCQ9BYG8 508 aa12.6□□□□□ -0.39
RPUSD4-201ENST00000298317 AUNIPQ9H7T9 357 aa12.6□□□□□ -0.39
RPUSD4-201ENST00000298317 KCNK12Q9HB15 430 aa12.6□□□□□ -0.39
RPUSD4-201ENST00000298317 BCL2L10Q9HD36 194 aa12.6□□□□□ -0.39
RPUSD4-201ENST00000298317 COA4Q9NYJ1 87 aa12.6□□□□□ -0.39
RPUSD4-201ENST00000298317 FBXL2Q9UKC9 423 aa12.6□□□□□ -0.39
RPUSD4-201ENST00000298317 CLEC4AQ9UMR7 237 aa12.6□□□□□ -0.39
RPUSD4-201ENST00000298317 PGRMC2O15173 223 aa12.6□□□□□ -0.39
RPUSD4-201ENST00000298317 SSX5O60225 188 aa12.6□□□□□ -0.39
RPUSD4-201ENST00000298317 ITGA10O75578 1167 aa12.6□□□□□ -0.39
RPUSD4-201ENST00000298317 RP2O75695 350 aa12.6□□□□□ -0.39
RPUSD4-201ENST00000298317 NTN1O95631 604 aa12.6□□□□□ -0.39
RPUSD4-201ENST00000298317 RB1P06400 928 aa12.6□□□□□ -0.39
RPUSD4-201ENST00000298317 TYRP14679 529 aa12.6□□□□□ -0.39
RPUSD4-201ENST00000298317 FPR3P25089 353 aa12.6□□□□□ -0.39
RPUSD4-201ENST00000298317 ARHGDIBP52566 201 aa12.6□□□□□ -0.39
RPUSD4-201ENST00000298317 CTSCP53634 463 aa12.6□□□□□ -0.39
RPUSD4-201ENST00000298317 TAS2R41P59536 307 aa12.6□□□□□ -0.39
RPUSD4-201ENST00000298317 RAP2BP61225 183 aa12.6□□□□□ -0.39
RPUSD4-201ENST00000298317 SIM1P81133 766 aaPredicted RBP12.6□□□□□ -0.39
RPUSD4-201ENST00000298317 HTR4Q13639 388 aa12.6□□□□□ -0.39
RPUSD4-201ENST00000298317 C17orf107Q6ZR85 190 aa12.6□□□□□ -0.39
RPUSD4-201ENST00000298317 SLC24A5Q71RS6 500 aa12.6□□□□□ -0.39
RPUSD4-201ENST00000298317 HMGN2P46Q86SG4 172 aa12.6□□□□□ -0.39
RPUSD4-201ENST00000298317 ZNF740Q8NDX6 193 aa12.6□□□□□ -0.39
RPUSD4-201ENST00000298317 OR4D9Q8NGE8 314 aa12.6□□□□□ -0.39
RPUSD4-201ENST00000298317 ABHD4Q8TB40 342 aa12.6□□□□□ -0.39
RPUSD4-201ENST00000298317 XAGE5Q8WWM1 108 aa12.6□□□□□ -0.39
RPUSD4-201ENST00000298317 LINC01599Q8WXQ3 324 aa12.6□□□□□ -0.39
RPUSD4-201ENST00000298317 SORCS1Q8WY21 1168 aa12.6□□□□□ -0.39
RPUSD4-201ENST00000298317 TM4SF18Q96CE8 201 aa12.6□□□□□ -0.39
RPUSD4-201ENST00000298317 IFT27Q9BW83 186 aa12.6□□□□□ -0.39
RPUSD4-201ENST00000298317 TTYH1Q9H313 450 aaPredicted RBP12.6□□□□□ -0.39
RPUSD4-201ENST00000298317 ABRACLQ9P1F3 81 aa12.6□□□□□ -0.39
RPUSD4-201ENST00000298317 GPR160Q9UJ42 338 aa12.6□□□□□ -0.39
RPUSD4-201ENST00000298317 ANXA2P2A6NMY6 339 aa12.59□□□□□ -0.39
RPUSD4-201ENST00000298317 PLPP1O14494 284 aa12.59□□□□□ -0.39
RPUSD4-201ENST00000298317 GREM1O60565 184 aa12.59□□□□□ -0.39
RPUSD4-201ENST00000298317 DUSP11O75319 330 aaKnown RBP12.59□□□□□ -0.39
RPUSD4-201ENST00000298317 OR2A4O95047 310 aa12.59□□□□□ -0.39
RPUSD4-201ENST00000298317 C1orf105O95561 183 aa12.59□□□□□ -0.39
RPUSD4-201ENST00000298317 CHRM4P08173 479 aa12.59□□□□□ -0.39
RPUSD4-201ENST00000298317 AKR1A1P14550 325 aa12.59□□□□□ -0.39
RPUSD4-201ENST00000298317 ATF1P18846 271 aa12.59□□□□□ -0.39
RPUSD4-201ENST00000298317 RAB3BP20337 219 aa12.59□□□□□ -0.39
RPUSD4-201ENST00000298317 PSMB1P20618 241 aaKnown RBP12.59□□□□□ -0.39
RPUSD4-201ENST00000298317 S100A11P31949 105 aa12.59□□□□□ -0.39
RPUSD4-201ENST00000298317 HSD17B2P37059 387 aa12.59□□□□□ -0.39
RPUSD4-201ENST00000298317 STAT5AP42229 794 aa12.59□□□□□ -0.39
RPUSD4-201ENST00000298317 CCR9P51686 369 aa12.59□□□□□ -0.39
RPUSD4-201ENST00000298317 SNRPD1P62314 119 aaKnown RBP12.59□□□□□ -0.39
RPUSD4-201ENST00000298317 TSTA3Q13630 321 aaPredicted RBP12.59□□□□□ -0.39
RPUSD4-201ENST00000298317 TRAM2Q15035 370 aa12.59□□□□□ -0.39
RPUSD4-201ENST00000298317 TMEM255AQ5JRV8 349 aa12.59□□□□□ -0.39
RPUSD4-201ENST00000298317 ELFN2Q5R3F8 820 aa12.59□□□□□ -0.39
RPUSD4-201ENST00000298317 ESPNLQ6ZVH7 1005 aa12.59□□□□□ -0.39
RPUSD4-201ENST00000298317 LMNTD1Q8N9Z9 388 aa12.59□□□□□ -0.39
RPUSD4-201ENST00000298317 SLC35G5Q96KT7 338 aa12.59□□□□□ -0.39
RPUSD4-201ENST00000298317 CAMK1GQ96NX5 476 aa12.59□□□□□ -0.39
RPUSD4-201ENST00000298317 OR2A7Q96R45 310 aa12.59□□□□□ -0.39
RPUSD4-201ENST00000298317 DMRTA2Q96SC8 542 aa12.59□□□□□ -0.39
RPUSD4-201ENST00000298317 ZCCHC4Q9H5U6 513 aa12.59□□□□□ -0.39
RPUSD4-201ENST00000298317 KLHL1Q9NR64 748 aa12.59□□□□□ -0.39
RPUSD4-201ENST00000298317 H2AFY2Q9P0M6 372 aaPredicted RBP12.59□□□□□ -0.39
RPUSD4-201ENST00000298317 C5AR2Q9P296 337 aa12.59□□□□□ -0.39
RPUSD4-201ENST00000298317 E9PI62 339 aa12.59□□□□□ -0.39
RPUSD4-201ENST00000298317 SNRPBP14678 240 aaKnown RBP12.59□□□□□ -0.39
RPUSD4-201ENST00000298317 GABRA1P14867 456 aa12.59□□□□□ -0.39
RPUSD4-201ENST00000298317 PDHA2P29803 388 aa12.59□□□□□ -0.39
RPUSD4-201ENST00000298317 BUD31P41223 144 aaPredicted RBP12.59□□□□□ -0.39
RPUSD4-201ENST00000298317 RECQLP46063 649 aaPredicted RBP12.59□□□□□ -0.39
RPUSD4-201ENST00000298317 SMAD3P84022 425 aaKnown RBP12.59□□□□□ -0.39
RPUSD4-201ENST00000298317 SFRP4Q6FHJ7 346 aaPredicted RBP12.59□□□□□ -0.39
RPUSD4-201ENST00000298317 GLDNQ6ZMI3 551 aaPredicted RBP12.59□□□□□ -0.39
RPUSD4-201ENST00000298317 ZNF620Q6ZNG0 422 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms