RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 CTNSO60931 367 aa16.6■□□□□ 0.25
CDC42EP3-201ENST00000295324 C3P1Q6ZMU1 363 aa16.6■□□□□ 0.25
CDC42EP3-201ENST00000295324 TMPRSS12Q86WS5 348 aa16.6■□□□□ 0.25
CDC42EP3-201ENST00000295324 ESX1Q8N693 406 aa16.6■□□□□ 0.25
CDC42EP3-201ENST00000295324 HAVCR2Q8TDQ0 301 aa16.6■□□□□ 0.25
CDC42EP3-201ENST00000295324 TRUB1Q8WWH5 349 aaKnown RBP16.6■□□□□ 0.25
CDC42EP3-201ENST00000295324 BIRC8Q96P09 236 aa16.6■□□□□ 0.25
CDC42EP3-201ENST00000295324 MGLLQ99685 303 aa16.6■□□□□ 0.25
CDC42EP3-201ENST00000295324 PRDM9Q9NQV7 894 aa16.6■□□□□ 0.25
CDC42EP3-201ENST00000295324 FOXD2O60548 495 aaPredicted RBP16.59■□□□□ 0.25
CDC42EP3-201ENST00000295324 PLATP00750 562 aa16.59■□□□□ 0.25
CDC42EP3-201ENST00000295324 ZNF12P17014 697 aa16.59■□□□□ 0.25
CDC42EP3-201ENST00000295324 SLC46A1Q96NT5 459 aa16.59■□□□□ 0.25
CDC42EP3-201ENST00000295324 SLC30A3Q99726 388 aa16.59■□□□□ 0.25
CDC42EP3-201ENST00000295324 CNIH4Q9P003 139 aa16.59■□□□□ 0.25
CDC42EP3-201ENST00000295324 WNT16Q9UBV4 365 aa16.59■□□□□ 0.25
CDC42EP3-201ENST00000295324 ZNF264O43296 627 aa16.59■□□□□ 0.25
CDC42EP3-201ENST00000295324 ZNF749O43361 778 aa16.59■□□□□ 0.25
CDC42EP3-201ENST00000295324 CNR2P34972 360 aa16.59■□□□□ 0.25
CDC42EP3-201ENST00000295324 SLC5A12Q1EHB4 618 aa16.59■□□□□ 0.25
CDC42EP3-201ENST00000295324 ANKDD1AQ495B1 522 aa16.59■□□□□ 0.25
CDC42EP3-201ENST00000295324 SYT13Q7L8C5 426 aa16.59■□□□□ 0.25
CDC42EP3-201ENST00000295324 GRAMD2AQ8IUY3 354 aa16.59■□□□□ 0.25
CDC42EP3-201ENST00000295324 DCAF13Q9NV06 445 aaKnown RBP16.59■□□□□ 0.25
CDC42EP3-201ENST00000295324 TBC1D29Q9UFV1 150 aa16.59■□□□□ 0.25
CDC42EP3-201ENST00000295324 HBA1P69905 142 aa16.59■□□□□ 0.25
CDC42EP3-201ENST00000295324 CHRDQ9H2X0 955 aa16.59■□□□□ 0.25
CDC42EP3-201ENST00000295324 CR2P20023 1033 aa16.59■□□□□ 0.25
CDC42EP3-201ENST00000295324 WDR53Q7Z5U6 358 aaPredicted RBP16.59■□□□□ 0.25
CDC42EP3-201ENST00000295324 ANKK1Q8NFD2 765 aa16.59■□□□□ 0.25
CDC42EP3-201ENST00000295324 C1QTNF2Q9BXJ5 285 aa16.59■□□□□ 0.25
CDC42EP3-201ENST00000295324 MKRN2Q9H000 416 aaKnown RBP16.59■□□□□ 0.25
CDC42EP3-201ENST00000295324 USP36Q9P275 1121 aaKnown RBP16.59■□□□□ 0.25
CDC42EP3-201ENST00000295324 IL20RAQ9UHF4 553 aa16.59■□□□□ 0.25
CDC42EP3-201ENST00000295324 ZNF443Q9Y2A4 671 aaPredicted RBP16.59■□□□□ 0.25
CDC42EP3-201ENST00000295324 SLC6A5Q9Y345 797 aa16.59■□□□□ 0.25
CDC42EP3-201ENST00000295324 IER3IP1Q9Y5U9 82 aa16.59■□□□□ 0.25
CDC42EP3-201ENST00000295324 K7ESM1 405 aa16.59■□□□□ 0.25
CDC42EP3-201ENST00000295324 SLC35E2P0CK97 266 aa16.59■□□□□ 0.25
CDC42EP3-201ENST00000295324 PSPHP78330 225 aa16.59■□□□□ 0.25
CDC42EP3-201ENST00000295324 OR8H3Q8N146 312 aa16.59■□□□□ 0.25
CDC42EP3-201ENST00000295324 GALNT15Q8N3T1 639 aa16.59■□□□□ 0.25
CDC42EP3-201ENST00000295324 LILRA3Q8N6C8 439 aaPredicted RBP16.59■□□□□ 0.25
CDC42EP3-201ENST00000295324 BPIFA2Q96DR5 249 aa16.59■□□□□ 0.25
CDC42EP3-201ENST00000295324 OR10A5Q9H207 317 aa16.59■□□□□ 0.25
CDC42EP3-201ENST00000295324 DOCK2Q92608 1830 aa16.58■□□□□ 0.25
CDC42EP3-201ENST00000295324 SLC5A10A0PJK1 596 aa16.58■□□□□ 0.25
CDC42EP3-201ENST00000295324 PLRG1O43660 514 aaKnown RBP16.58■□□□□ 0.25
CDC42EP3-201ENST00000295324 ZNF740Q8NDX6 193 aa16.58■□□□□ 0.25
CDC42EP3-201ENST00000295324 PDFQ9HBH1 243 aa16.58■□□□□ 0.25
CDC42EP3-201ENST00000295324 NGBQ9NPG2 151 aa16.58■□□□□ 0.25
CDC42EP3-201ENST00000295324 NUFIP1Q9UHK0 495 aaKnown RBP16.58■□□□□ 0.25
CDC42EP3-201ENST00000295324 EVPLQ92817 2033 aa16.58■□□□□ 0.24
CDC42EP3-201ENST00000295324 SLC19A2O60779 497 aa16.58■□□□□ 0.24
CDC42EP3-201ENST00000295324 EXT1Q16394 746 aa16.58■□□□□ 0.24
CDC42EP3-201ENST00000295324 OR5M10Q6IEU7 315 aa16.58■□□□□ 0.24
CDC42EP3-201ENST00000295324 MRPL21Q7Z2W9 205 aaKnown RBP16.58■□□□□ 0.24
CDC42EP3-201ENST00000295324 LCORQ96JN0 433 aaPredicted RBP16.58■□□□□ 0.24
CDC42EP3-201ENST00000295324 DMRTB1Q96MA1 342 aa16.58■□□□□ 0.24
CDC42EP3-201ENST00000295324 TUBA1CQ9BQE3 449 aa16.58■□□□□ 0.24
CDC42EP3-201ENST00000295324 TESQ9UGI8 421 aaKnown RBP16.58■□□□□ 0.24
CDC42EP3-201ENST00000295324 GPR160Q9UJ42 338 aa16.58■□□□□ 0.24
CDC42EP3-201ENST00000295324 YBX2Q9Y2T7 364 aaKnown RBP16.58■□□□□ 0.24
CDC42EP3-201ENST00000295324 CMAHPQ9Y471 501 aa16.58■□□□□ 0.24
CDC42EP3-201ENST00000295324 LRRN3E7EW58 273 aa16.58■□□□□ 0.24
CDC42EP3-201ENST00000295324 OR7A17O14581 309 aa16.58■□□□□ 0.24
CDC42EP3-201ENST00000295324 PRH1P02810 166 aa16.58■□□□□ 0.24
CDC42EP3-201ENST00000295324 LILRA6Q6PI73 481 aa16.58■□□□□ 0.24
CDC42EP3-201ENST00000295324 LRRN3Q9H3W5 708 aa16.58■□□□□ 0.24
CDC42EP3-201ENST00000295324 STSP08842 583 aa16.58■□□□□ 0.24
CDC42EP3-201ENST00000295324 PTGS2P35354 604 aa16.58■□□□□ 0.24
CDC42EP3-201ENST00000295324 RAB15P59190 212 aa16.58■□□□□ 0.24
CDC42EP3-201ENST00000295324 ARF1P84077 181 aaKnown RBP16.58■□□□□ 0.24
CDC42EP3-201ENST00000295324 HNRNPA0Q13151 305 aaKnown RBP16.58■□□□□ 0.24
CDC42EP3-201ENST00000295324 GPR19Q15760 415 aa16.58■□□□□ 0.24
CDC42EP3-201ENST00000295324 CHRFAM7AQ494W8 412 aa16.58■□□□□ 0.24
CDC42EP3-201ENST00000295324 C6orf15Q6UXA7 325 aaPredicted RBP16.58■□□□□ 0.24
CDC42EP3-201ENST00000295324 LINC00696Q6ZRV3 163 aa16.58■□□□□ 0.24
CDC42EP3-201ENST00000295324 CLEC14AQ86T13 490 aa16.58■□□□□ 0.24
CDC42EP3-201ENST00000295324 DNAAF1Q8NEP3 725 aa16.58■□□□□ 0.24
CDC42EP3-201ENST00000295324 ZNF160Q9HCG1 818 aa16.58■□□□□ 0.24
CDC42EP3-201ENST00000295324 PARPBPQ9NWS1 579 aa16.58■□□□□ 0.24
CDC42EP3-201ENST00000295324 PAK1IP1Q9NWT1 392 aaPredicted RBP16.58■□□□□ 0.24
CDC42EP3-201ENST00000295324 TMEM181Q9P2C4 612 aa16.58■□□□□ 0.24
CDC42EP3-201ENST00000295324 CARD8Q9Y2G2 431 aa16.58■□□□□ 0.24
CDC42EP3-201ENST00000295324 ALOX12BO75342 701 aa16.57■□□□□ 0.24
CDC42EP3-201ENST00000295324 MAGEA2P43356 314 aa16.57■□□□□ 0.24
CDC42EP3-201ENST00000295324 MECP2P51608 486 aaKnown RBP16.57■□□□□ 0.24
CDC42EP3-201ENST00000295324 ABHD17CQ6PCB6 329 aa16.57■□□□□ 0.24
CDC42EP3-201ENST00000295324 KIAA1958Q8N8K9 716 aa16.57■□□□□ 0.24
CDC42EP3-201ENST00000295324 SLC5A7Q9GZV3 580 aa16.57■□□□□ 0.24
CDC42EP3-201ENST00000295324 FARSAQ9Y285 508 aaKnown RBP16.57■□□□□ 0.24
CDC42EP3-201ENST00000295324 ANXA3P12429 323 aa16.57■□□□□ 0.24
CDC42EP3-201ENST00000295324 NPPBP16860 134 aa16.57■□□□□ 0.24
CDC42EP3-201ENST00000295324 CCL11P51671 97 aa16.57■□□□□ 0.24
CDC42EP3-201ENST00000295324 NKAIN1Q4KMZ8 207 aa16.57■□□□□ 0.24
CDC42EP3-201ENST00000295324 ZADH2Q8N4Q0 377 aa16.57■□□□□ 0.24
CDC42EP3-201ENST00000295324 SAMD12Q8N8I0 201 aa16.57■□□□□ 0.24
CDC42EP3-201ENST00000295324 TAMM41Q96BW9 452 aa16.57■□□□□ 0.24
CDC42EP3-201ENST00000295324 PCED1AQ9H1Q7 454 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms