RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 GPR50Q13585 617 aa15.22■□□□□ 0.03
SSRP1-202ENST00000293880 SLC35G1Q2M3R5 365 aa15.22■□□□□ 0.03
SSRP1-202ENST00000293880 ALKAL2Q6UX46 152 aa15.22■□□□□ 0.03
SSRP1-202ENST00000293880 FAM109AQ8N4B1 249 aa15.22■□□□□ 0.03
SSRP1-202ENST00000293880 SLC2A13Q96QE2 648 aa15.22■□□□□ 0.03
SSRP1-202ENST00000293880 TSPAN10Q9H1Z9 355 aaPredicted RBP15.22■□□□□ 0.03
SSRP1-202ENST00000293880 ATG4BQ9Y4P1 393 aa15.22■□□□□ 0.03
SSRP1-202ENST00000293880 PUS1Q9Y606 427 aaKnown RBP eCLIP15.22■□□□□ 0.03
SSRP1-202ENST00000293880 PABPC4LP0CB38 370 aaKnown RBP15.22■□□□□ 0.03
SSRP1-202ENST00000293880 XCR1P46094 333 aa15.22■□□□□ 0.03
SSRP1-202ENST00000293880 LARP4Q71RC2 724 aaKnown RBP eCLIP15.22■□□□□ 0.033e-9■■■■□ 24.1
SSRP1-202ENST00000293880 ZNF765Q7L2R6 523 aa15.22■□□□□ 0.03
SSRP1-202ENST00000293880 COMMD6Q7Z4G1 85 aa15.22■□□□□ 0.03
SSRP1-202ENST00000293880 RAB3DO95716 219 aa15.21■□□□□ 0.03
SSRP1-202ENST00000293880 LCATP04180 440 aa15.21■□□□□ 0.03
SSRP1-202ENST00000293880 CRHBPP24387 322 aa15.21■□□□□ 0.03
SSRP1-202ENST00000293880 NSDHLQ15738 373 aa15.21■□□□□ 0.03
SSRP1-202ENST00000293880 INAVAQ3KP66 663 aa15.21■□□□□ 0.03
SSRP1-202ENST00000293880 NT5C3BQ969T7 300 aa15.21■□□□□ 0.03
SSRP1-202ENST00000293880 TCEAL7Q9BRU2 100 aa15.21■□□□□ 0.03
SSRP1-202ENST00000293880 GPR62Q9BZJ7 368 aa15.21■□□□□ 0.03
SSRP1-202ENST00000293880 OR51J1Q9H342 316 aa15.21■□□□□ 0.03
SSRP1-202ENST00000293880 DDX31Q9H8H2 851 aaKnown RBP15.21■□□□□ 0.03
SSRP1-202ENST00000293880 RANGRFQ9HD47 186 aaPredicted RBP15.21■□□□□ 0.03
SSRP1-202ENST00000293880 CLDN8P56748 225 aa15.21■□□□□ 0.03
SSRP1-202ENST00000293880 CCNL2Q96S94 520 aaPredicted RBP15.21■□□□□ 0.03
SSRP1-202ENST00000293880 ZNF160Q9HCG1 818 aa15.21■□□□□ 0.03
SSRP1-202ENST00000293880 CEPT1Q9Y6K0 416 aa15.21■□□□□ 0.03
SSRP1-202ENST00000293880 AKAIN1P0CW23 69 aa15.21■□□□□ 0.03
SSRP1-202ENST00000293880 SLC22A10Q63ZE4 541 aa15.21■□□□□ 0.03
SSRP1-202ENST00000293880 OR52W1Q6IF63 320 aa15.21■□□□□ 0.03
SSRP1-202ENST00000293880 C3P1Q6ZMU1 363 aa15.21■□□□□ 0.03
SSRP1-202ENST00000293880 SHISA4Q96DD7 197 aa15.21■□□□□ 0.03
SSRP1-202ENST00000293880 WDR92Q96MX6 357 aa15.21■□□□□ 0.03
SSRP1-202ENST00000293880 ACTRT3Q9BYD9 372 aa15.21■□□□□ 0.03
SSRP1-202ENST00000293880 MEPEQ9NQ76 525 aaPredicted RBP15.21■□□□□ 0.03
SSRP1-202ENST00000293880 HIF1ANQ9NWT6 349 aa15.21■□□□□ 0.03
SSRP1-202ENST00000293880 NME7Q9Y5B8 376 aa15.21■□□□□ 0.03
SSRP1-202ENST00000293880 SOD2P04179 222 aa15.21■□□□□ 0.03
SSRP1-202ENST00000293880 DTWD1Q8N5C7 304 aa15.21■□□□□ 0.03
SSRP1-202ENST00000293880 PDE7BQ9NP56 450 aa15.21■□□□□ 0.03
SSRP1-202ENST00000293880 COL14A1Q05707 1796 aaKnown RBP15.21■□□□□ 0.02
SSRP1-202ENST00000293880 GSRP00390 522 aa15.21■□□□□ 0.02
SSRP1-202ENST00000293880 ARSBP15848 533 aa15.21■□□□□ 0.02
SSRP1-202ENST00000293880 RAB3AP20336 220 aa15.21■□□□□ 0.02
SSRP1-202ENST00000293880 WNT4P56705 351 aa15.21■□□□□ 0.02
SSRP1-202ENST00000293880 TAS2R20P59543 309 aa15.21■□□□□ 0.02
SSRP1-202ENST00000293880 LRRC18Q8N456 261 aa15.21■□□□□ 0.02
SSRP1-202ENST00000293880 C12orf45Q8N5I9 185 aaPredicted RBP15.21■□□□□ 0.02
SSRP1-202ENST00000293880 GIMAP1Q8WWP7 306 aa15.21■□□□□ 0.02
SSRP1-202ENST00000293880 TPSD1Q9BZJ3 242 aa15.21■□□□□ 0.02
SSRP1-202ENST00000293880 MFFQ9GZY8 342 aa15.21■□□□□ 0.02
SSRP1-202ENST00000293880 UNKLQ9H9P5 680 aaKnown RBP15.21■□□□□ 0.02
SSRP1-202ENST00000293880 ABRACLQ9P1F3 81 aa15.21■□□□□ 0.02
SSRP1-202ENST00000293880 FANCGO15287 622 aa15.2■□□□□ 0.02
SSRP1-202ENST00000293880 MED6O75586 246 aa15.2■□□□□ 0.02
SSRP1-202ENST00000293880 IGFBP1P08833 259 aaPredicted RBP15.2■□□□□ 0.02
SSRP1-202ENST00000293880 DBHP09172 617 aa15.2■□□□□ 0.02
SSRP1-202ENST00000293880 CD6P30203 668 aa15.2■□□□□ 0.02
SSRP1-202ENST00000293880 RPS5P46782 204 aaKnown RBP15.2■□□□□ 0.02
SSRP1-202ENST00000293880 C18orf63Q68DL7 685 aa15.2■□□□□ 0.02
SSRP1-202ENST00000293880 CHST14Q8NCH0 376 aa15.2■□□□□ 0.02
SSRP1-202ENST00000293880 L3HYPDHQ96EM0 354 aa15.2■□□□□ 0.02
SSRP1-202ENST00000293880 PINK1Q9BXM7 581 aa15.2■□□□□ 0.02
SSRP1-202ENST00000293880 ZNF436Q9C0F3 470 aaPredicted RBP15.2■□□□□ 0.02
SSRP1-202ENST00000293880 GPN2Q9H9Y4 310 aaPredicted RBP15.2■□□□□ 0.02
SSRP1-202ENST00000293880 LRRTM2O43300 516 aa15.2■□□□□ 0.02
SSRP1-202ENST00000293880 SOCS5O75159 536 aa15.2■□□□□ 0.02
SSRP1-202ENST00000293880 SNAPINO95295 136 aa15.2■□□□□ 0.02
SSRP1-202ENST00000293880 SLC9A3R2Q15599 337 aa15.2■□□□□ 0.02
SSRP1-202ENST00000293880 PARP16Q8N5Y8 322 aa15.2■□□□□ 0.02
SSRP1-202ENST00000293880 LILRB4Q8NHJ6 448 aa15.2■□□□□ 0.02
SSRP1-202ENST00000293880 SLC38A1Q9H2H9 487 aa15.2■□□□□ 0.02
SSRP1-202ENST00000293880 TMEM14AQ9Y6G1 99 aa15.2■□□□□ 0.02
SSRP1-202ENST00000293880 SULT1C2O00338 296 aa15.2■□□□□ 0.02
SSRP1-202ENST00000293880 DVL2O14641 736 aa15.2■□□□□ 0.02
SSRP1-202ENST00000293880 ICMTO60725 284 aa15.2■□□□□ 0.02
SSRP1-202ENST00000293880 EPOP01588 193 aa15.2■□□□□ 0.02
SSRP1-202ENST00000293880 UBE2NP61088 152 aaKnown RBP15.2■□□□□ 0.02
SSRP1-202ENST00000293880 ADARB1P78563 741 aaKnown RBP15.2■□□□□ 0.02
SSRP1-202ENST00000293880 KCNJ8Q15842 424 aa15.2■□□□□ 0.02
SSRP1-202ENST00000293880 SLC2A4RGQ9NR83 387 aa15.2■□□□□ 0.02
SSRP1-202ENST00000293880 TP53P04637 393 aaPredicted RBP15.2■□□□□ 0.02
SSRP1-202ENST00000293880 GAAP10253 952 aa15.2■□□□□ 0.02
SSRP1-202ENST00000293880 ACTBP60709 375 aa15.2■□□□□ 0.02
SSRP1-202ENST00000293880 ACTG1P63261 375 aa15.2■□□□□ 0.02
SSRP1-202ENST00000293880 SORDQ00796 357 aa15.2■□□□□ 0.02
SSRP1-202ENST00000293880 COQ5Q5HYK3 327 aa15.2■□□□□ 0.02
SSRP1-202ENST00000293880 AGAP7PQ5VUJ5 663 aa15.2■□□□□ 0.02
SSRP1-202ENST00000293880 AGAP6Q5VW22 663 aa15.2■□□□□ 0.02
SSRP1-202ENST00000293880 MAMDC2Q7Z304 686 aaPredicted RBP15.2■□□□□ 0.02
SSRP1-202ENST00000293880 RELL1Q8IUW5 271 aa15.2■□□□□ 0.02
SSRP1-202ENST00000293880 SGPP2Q8IWX5 399 aa15.2■□□□□ 0.02
SSRP1-202ENST00000293880 OR8J2Q8NGG1 315 aa15.2■□□□□ 0.02
SSRP1-202ENST00000293880 DENND1AQ8TEH3 1009 aa15.2■□□□□ 0.02
SSRP1-202ENST00000293880 AGAP4Q96P64 663 aa15.2■□□□□ 0.02
SSRP1-202ENST00000293880 FAM234AQ9H0X4 552 aa15.2■□□□□ 0.02
SSRP1-202ENST00000293880 RLIMQ9NVW2 624 aa15.2■□□□□ 0.02
SSRP1-202ENST00000293880 FAM53CQ9NYF3 392 aa15.2■□□□□ 0.02
SSRP1-202ENST00000293880 PHYHO14832 338 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms